Os02g0566900
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os02g0566900 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 21.94 | 0.22 | 10.7 | 0.343 | 0.429 | 0.614 | -0.154 | 0.0898 | 0.154 | 23.5 | 21.2 | 1506 | -- | -- |
| 21.94 | 0.218 | 10.7 | 0.328 | 0.432 | 0.596 | -0.141 | -- | 0.15 | 23.5 | 21.3 | 1570 | -- | -- |
| 22.03 | 0.219 | 10.7 | 0.342 | 0.432 | 0.616 | -- | 0.0786 | 0.153 | 23.5 | 21.2 | 1560 | -- | -- |
| 22.02 | 0.219 | 10.7 | 0.334 | 0.433 | 0.589 | -- | -- | 0.146 | 23.5 | 21.5 | 1570 | -- | -- |
| 30.62 | 0.258 | 10.7 | 0.36 | -- | 0.63 | -- | 0.0253 | 0.143 | -- | 21.38 | 907 | -- | -- |
| 31.81 | 0.264 | 10.7 | 0.575 | 0.436 | -- | -0.178 | -- | 0.313 | 23.6 | -- | -- | -- | -- |
| 31.95 | 0.265 | 10.7 | 0.583 | 0.437 | -- | -- | -- | 0.314 | 23.6 | -- | -- | -- | -- |
| 30.59 | 0.258 | 10.7 | 0.351 | -- | 0.631 | -- | -- | 0.148 | -- | 21.28 | 915 | -- | -- |
| 23.6 | 0.226 | 10.7 | -- | 0.406 | 0.816 | -- | -- | 0.0952 | 23.4 | 19.89 | 3959 | -- | -- |
| 43.96 | 0.31 | 10.7 | 0.595 | -- | -- | -- | -- | 0.319 | -- | -- | -- | -- | -- |
| 40.89 | 0.299 | 10.7 | -- | 0.444 | -- | -- | -- | 0.249 | 23.6 | -- | -- | -- | -- |
| 33.46 | 0.269 | 10.7 | -- | -- | 0.719 | -- | -- | 0.0959 | -- | 21.3 | 949 | -- | -- |
| 53.28 | 0.341 | 10.7 | -- | -- | -- | -- | -- | 0.253 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 21.17 | wind | 1 | 43200 | > th | dose dependent | rect. | 1 | 1 |
| 2 | 21.97 | wind | 9 | 43200 | < th | dose dependent | rect. | 1 | 1 |
| 5 | 22.24 | wind | 3 | 43200 | > th | dose independent | rect. | 1 | 1 |
| 6 | 22.31 | temperature | 20 | 1440 | > th | dose independent | rect. | 3 | 1 |
| 7 | 22.32 | temperature | 20 | 4320 | < th | dose independent | rect. | 19 | 5 |
| 8 | 22.33 | temperature | 20 | 4320 | > th | dose independent | rect. | 22 | 1 |
| 10 | 22.35 | temperature | 20 | 1440 | > th | dose independent | rect. | 3 | 4 |
| 12 | 22.38 | temperature | 20 | 4320 | < th | dose independent | rect. | 20 | 3 |
| 13 | 22.40 | temperature | 20 | 1440 | < th | dose independent | rect. | 3 | 4 |
| 24 | 22.51 | temperature | 20 | 4320 | > th | dose independent | rect. | 18 | 6 |
| 27 | 22.53 | temperature | 20 | 1440 | < th | dose independent | rect. | 3 | 1 |
| 35 | 22.58 | temperature | 20 | 1440 | > th | dose independent | rect. | 5 | 1 |
| 39 | 22.58 | temperature | 15 | 270 | > th | dose dependent | rect. | 16 | 22 |
| 43 | 22.59 | wind | 9 | 14400 | < th | dose independent | rect. | 4 | 9 |
| 44 | 22.59 | temperature | 20 | 4320 | < th | dose independent | rect. | 17 | 10 |
| 57 | 22.63 | wind | 3 | 43200 | < th | dose independent | rect. | 1 | 1 |
| 73 | 22.66 | wind | 9 | 14400 | > th | dose dependent | rect. | 5 | 8 |
| 74 | 22.67 | temperature | 20 | 1440 | > th | dose independent | sin | 7 | NA |
| 77 | 22.67 | wind | 9 | 14400 | < th | dose independent | rect. | 5 | 7 |
| 79 | 22.68 | temperature | 20 | 4320 | < th | dose independent | sin | 16 | NA |
| 82 | 22.68 | temperature | 20 | 4320 | > th | dose independent | rect. | 16 | 12 |
| 93 | 22.69 | wind | 9 | 14400 | < th | dose independent | rect. | 2 | 11 |
| 103 | 22.71 | temperature | 20 | 1440 | > th | dose independent | rect. | 1 | 10 |
| 160 | 22.77 | temperature | 20 | 1440 | > th | dose independent | rect. | 17 | 14 |
| 164 | 22.78 | temperature | 20 | 4320 | > th | dose independent | sin | 15 | NA |
| 167 | 22.78 | temperature | 20 | 1440 | < th | dose independent | sin | 7 | NA |
| 179 | 22.79 | temperature | 20 | 1440 | < th | dose independent | rect. | 1 | 10 |
| 189 | 22.79 | temperature | 10 | 1440 | > th | dose dependent | rect. | 1 | 4 |
| 190 | 22.79 | temperature | 30 | 1440 | < th | dose dependent | rect. | 1 | 4 |
| 212 | 22.80 | temperature | 25 | 1440 | < th | dose dependent | rect. | 17 | 12 |
| 220 | 22.81 | temperature | 20 | 1440 | < th | dose independent | rect. | 24 | 13 |
| 238 | 22.83 | temperature | 20 | 1440 | < th | dose independent | rect. | 5 | 1 |
| 305 | 22.87 | temperature | 25 | 14400 | < th | dose independent | rect. | 10 | 2 |
| 323 | 22.88 | wind | 9 | 14400 | < th | dose independent | rect. | 23 | 14 |
| 339 | 22.89 | temperature | 25 | 14400 | > th | dose independent | rect. | 10 | 2 |
| 414 | 22.92 | temperature | 25 | 1440 | < th | dose dependent | sin | 13 | NA |
| 480 | 22.96 | wind | 9 | 14400 | > th | dose independent | rect. | 5 | 7 |
| 507 | 22.97 | temperature | 20 | 4320 | < th | dose dependent | rect. | 1 | 1 |
| 585 | 23.02 | wind | 9 | 14400 | > th | dose independent | rect. | 23 | 14 |
| 648 | 23.05 | wind | 9 | 14400 | > th | dose independent | rect. | 4 | 9 |
| 727 | 23.08 | temperature | 10 | 270 | > th | dose dependent | sin | 9 | NA |
| 804 | 23.11 | temperature | 25 | 1440 | < th | dose dependent | rect. | 21 | 2 |
| 879 | 23.15 | temperature | 20 | 1440 | > th | dose independent | no | NA | NA |
| 926 | 23.16 | temperature | 25 | 270 | < th | dose dependent | rect. | 21 | 23 |
| 961 | 23.18 | wind | 9 | 14400 | > th | dose dependent | rect. | 10 | 3 |