Os02g0562600
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Mlo-related protein family protein.
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Os02g0562600 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Mlo-related protein family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 316.42 | 0.836 | 5.51 | 0.513 | 2.89 | 1.63 | 0.695 | -0.731 | 0.831 | 18.5 | 65.01 | 10 | -- | -- |
| 318.25 | 0.831 | 5.51 | 0.492 | 2.9 | 1.63 | 0.823 | -- | 0.827 | 18.4 | 65 | 9 | -- | -- |
| 317.54 | 0.83 | 5.51 | 0.505 | 2.88 | 1.59 | -- | -0.81 | 0.835 | 18.5 | 65.47 | 8 | -- | -- |
| 319.81 | 0.833 | 5.51 | 0.476 | 2.88 | 1.56 | -- | -- | 0.823 | 18.5 | 65 | 8 | -- | -- |
| 695.37 | 1.23 | 5.47 | 0.466 | -- | 0.76 | -- | -1.05 | 0.696 | -- | 58.58 | 3 | -- | -- |
| 373.32 | 0.906 | 5.54 | 0.475 | 2.52 | -- | -0.0918 | -- | 0.7 | 20.2 | -- | -- | -- | -- |
| 373.34 | 0.905 | 5.54 | 0.478 | 2.52 | -- | -- | -- | 0.7 | 20.2 | -- | -- | -- | -- |
| 698.47 | 1.24 | 5.47 | 0.433 | -- | 0.689 | -- | -- | 0.705 | -- | 63 | 2 | -- | -- |
| 325.75 | 0.841 | 5.52 | -- | 2.87 | 1.56 | -- | -- | 0.771 | 18.5 | 65 | 8 | -- | -- |
| 724.24 | 1.26 | 5.47 | 0.458 | -- | -- | -- | -- | 0.67 | -- | -- | -- | -- | -- |
| 379.36 | 0.911 | 5.55 | -- | 2.52 | -- | -- | -- | 0.646 | 20.2 | -- | -- | -- | -- |
| 703.42 | 1.24 | 5.48 | -- | -- | 0.697 | -- | -- | 0.657 | -- | 63 | 2 | -- | -- |
| 729.77 | 1.26 | 5.49 | -- | -- | -- | -- | -- | 0.619 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 301.30 | humidity | 70 | 90 | > th | dose dependent | rect. | 1 | 18 |
| 2 | 302.79 | humidity | 80 | 90 | > th | dose independent | rect. | 1 | 18 |
| 22 | 307.53 | humidity | 70 | 10 | > th | dose dependent | sin | 1 | NA |
| 29 | 308.03 | humidity | 70 | 90 | > th | dose dependent | sin | 2 | NA |
| 37 | 308.75 | humidity | 60 | 10 | > th | dose dependent | rect. | 12 | 23 |
| 56 | 310.32 | humidity | 80 | 90 | < th | dose independent | rect. | 7 | 10 |
| 72 | 311.25 | humidity | 80 | 90 | < th | dose independent | rect. | 2 | 15 |
| 82 | 311.59 | humidity | 80 | 1440 | > th | dose independent | rect. | 8 | 8 |
| 83 | 311.65 | humidity | 80 | 1440 | < th | dose independent | rect. | 8 | 8 |
| 89 | 311.87 | humidity | 80 | 1440 | > th | dose independent | rect. | 11 | 3 |
| 90 | 311.89 | humidity | 80 | 1440 | < th | dose independent | rect. | 11 | 3 |
| 98 | 312.23 | humidity | 80 | 90 | > th | dose independent | sin | 2 | NA |
| 130 | 312.99 | humidity | 80 | 90 | < th | dose independent | sin | 2 | NA |
| 138 | 313.09 | humidity | 70 | 10 | > th | dose dependent | rect. | 1 | 23 |
| 208 | 314.66 | humidity | 70 | 90 | > th | dose dependent | rect. | 1 | 10 |
| 248 | 315.37 | humidity | 90 | 10 | < th | dose dependent | rect. | 20 | 22 |
| 254 | 315.49 | humidity | 90 | 10 | < th | dose dependent | rect. | 22 | 20 |
| 259 | 315.57 | humidity | 80 | 1440 | > th | dose independent | rect. | 13 | 1 |
| 264 | 315.73 | humidity | 80 | 1440 | > th | dose dependent | rect. | 11 | 3 |
| 274 | 315.83 | radiation | 20 | 90 | < th | dose dependent | rect. | 12 | 21 |
| 286 | 316.09 | humidity | 80 | 1440 | < th | dose independent | rect. | 13 | 1 |
| 317 | 316.49 | humidity | 90 | 90 | < th | dose dependent | rect. | 21 | 20 |
| 366 | 317.05 | humidity | 70 | 90 | > th | dose dependent | rect. | 5 | 14 |
| 445 | 318.01 | humidity | 60 | 10 | > th | dose dependent | rect. | 17 | 23 |
| 452 | 318.07 | humidity | 70 | 270 | > th | dose dependent | rect. | 23 | 11 |
| 456 | 318.17 | humidity | 70 | 30 | > th | dose dependent | rect. | 5 | 23 |
| 463 | 318.32 | humidity | 80 | 90 | > th | dose independent | rect. | 1 | 10 |
| 467 | 318.34 | humidity | 60 | 10 | > th | dose dependent | no | NA | NA |
| 478 | 318.53 | humidity | 70 | 90 | > th | dose dependent | no | NA | NA |
| 517 | 318.94 | humidity | 90 | 90 | < th | dose dependent | sin | 4 | NA |
| 526 | 319.02 | humidity | 70 | 30 | > th | dose dependent | rect. | 15 | 23 |
| 533 | 319.13 | humidity | 70 | 1440 | > th | dose dependent | rect. | 10 | 5 |
| 553 | 319.30 | humidity | 80 | 90 | > th | dose independent | rect. | 5 | 14 |
| 562 | 319.35 | humidity | 90 | 10 | < th | dose dependent | sin | 2 | NA |
| 572 | 319.45 | humidity | 70 | 30 | > th | dose dependent | rect. | 9 | 23 |
| 720 | 320.72 | humidity | 90 | 10 | < th | dose dependent | rect. | 3 | 15 |
| 738 | 320.93 | humidity | 90 | 10 | < th | dose dependent | rect. | 7 | 11 |
| 745 | 321.00 | humidity | 70 | 10 | > th | dose dependent | rect. | 21 | 23 |
| 785 | 321.39 | humidity | 80 | 1440 | > th | dose independent | sin | 2 | NA |
| 909 | 322.55 | humidity | 80 | 1440 | < th | dose independent | sin | 2 | NA |