BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os02g0562600 Os02g0562600|AK121163
(82 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT4G02600.1 | chr4:1144141-1147156 FORWARD LENGTH=527 115 6e-27
AT2G44110.2 | chr2:18245489-18248316 REVERSE LENGTH=498 110 2e-25
AT4G24250.1 | chr4:12575008-12577517 REVERSE LENGTH=479 92 4e-20
AT1G11310.1 | chr1:3800899-3803870 REVERSE LENGTH=574 82 7e-17
AT2G39200.1 | chr2:16356255-16359797 REVERSE LENGTH=577 80 2e-16
AT2G33670.1 | chr2:14245138-14247879 FORWARD LENGTH=502 80 2e-16
AT1G42560.1 | chr1:15980209-15983328 REVERSE LENGTH=461 80 2e-16
AT1G61560.1 | chr1:22708875-22712032 REVERSE LENGTH=584 79 3e-16
AT1G11000.1 | chr1:3671935-3675909 REVERSE LENGTH=574 78 1e-15
AT2G17480.1 | chr2:7590559-7593768 REVERSE LENGTH=594 77 2e-15
AT2G17430.1 | chr2:7568018-7570758 FORWARD LENGTH=543 70 2e-13
AT5G53760.1 | chr5:21823055-21826289 FORWARD LENGTH=574 69 4e-13
AT1G26700.1 | chr1:9228300-9232237 FORWARD LENGTH=555 69 7e-13
AT3G45290.1 | chr3:16617586-16621352 FORWARD LENGTH=509 64 1e-11
AT5G65970.1 | chr5:26387509-26390407 REVERSE LENGTH=570 62 7e-11
>AT4G02600.1 | chr4:1144141-1147156 FORWARD LENGTH=527
Length = 526
Score = 115 bits (287), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 54/73 (73%), Positives = 63/73 (86%)
Query: 7 FQMLLVVGTKLEHIITELAHQVAEKHTAIEGELVVSPSDELFWFHRPKIVLLLIHIVLFQ 66
F +LL VGTKLEH+I +LAH+VAEKH AIEG+LVV PSDE FWF +P+IVL LIH +LFQ
Sbjct: 321 FALLLAVGTKLEHVIAQLAHEVAEKHVAIEGDLVVKPSDEHFWFSKPQIVLYLIHFILFQ 380
Query: 67 NAFEIAFFFWLLV 79
NAFEIAFFFW+ V
Sbjct: 381 NAFEIAFFFWIWV 393
>AT2G44110.2 | chr2:18245489-18248316 REVERSE LENGTH=498
Length = 497
Score = 110 bits (274), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 50/70 (71%), Positives = 63/70 (90%)
Query: 9 MLLVVGTKLEHIITELAHQVAEKHTAIEGELVVSPSDELFWFHRPKIVLLLIHIVLFQNA 68
+LL VGTKLEHIIT+LAH+VAEKH A+EG+LVV PSD+LFWF P++VL LIH +LFQN+
Sbjct: 309 LLLAVGTKLEHIITDLAHEVAEKHIAVEGDLVVRPSDDLFWFQSPRLVLFLIHFILFQNS 368
Query: 69 FEIAFFFWLL 78
FEIA+FF++L
Sbjct: 369 FEIAYFFFIL 378
>AT4G24250.1 | chr4:12575008-12577517 REVERSE LENGTH=479
Length = 478
Score = 92.4 bits (228), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 45/67 (67%), Positives = 55/67 (82%), Gaps = 1/67 (1%)
Query: 12 VVGTKLEHIITELAHQVAEKHTAIEGELVVSPSDELFWFHRPKIVLLLIHIVLFQNAFEI 71
+VG KLE+II+ LA V+EK + E E V++PSDELFWFHRP IVL LIH +LFQN+FEI
Sbjct: 315 MVGAKLEYIISSLALDVSEKRSRAE-EAVITPSDELFWFHRPGIVLQLIHFILFQNSFEI 373
Query: 72 AFFFWLL 78
AFFFW+L
Sbjct: 374 AFFFWIL 380
>AT1G11310.1 | chr1:3800899-3803870 REVERSE LENGTH=574
Length = 573
Score = 81.6 bits (200), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 37/68 (54%), Positives = 51/68 (75%)
Query: 9 MLLVVGTKLEHIITELAHQVAEKHTAIEGELVVSPSDELFWFHRPKIVLLLIHIVLFQNA 68
++L+VGTKLE IIT+L ++ EK + G VV P D+LFWF +P+ +L LIH+VLF NA
Sbjct: 326 VILIVGTKLEVIITKLGLRIQEKGDVVRGAPVVQPGDDLFWFGKPRFILFLIHLVLFTNA 385
Query: 69 FEIAFFFW 76
F++AFF W
Sbjct: 386 FQLAFFAW 393
>AT2G39200.1 | chr2:16356255-16359797 REVERSE LENGTH=577
Length = 576
Score = 80.5 bits (197), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 35/68 (51%), Positives = 51/68 (75%)
Query: 9 MLLVVGTKLEHIITELAHQVAEKHTAIEGELVVSPSDELFWFHRPKIVLLLIHIVLFQNA 68
++L+VG KL+ II++L ++ EK ++G VV P D+LFWF RP+ +L LIH+VLF NA
Sbjct: 317 VILIVGAKLQMIISKLGLRIQEKGDVVKGAPVVEPGDDLFWFGRPRFILFLIHLVLFTNA 376
Query: 69 FEIAFFFW 76
F++AFF W
Sbjct: 377 FQLAFFVW 384
>AT2G33670.1 | chr2:14245138-14247879 FORWARD LENGTH=502
Length = 501
Score = 80.1 bits (196), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 35/69 (50%), Positives = 52/69 (75%)
Query: 9 MLLVVGTKLEHIITELAHQVAEKHTAIEGELVVSPSDELFWFHRPKIVLLLIHIVLFQNA 68
+ L +GTKL+ II+++A ++ E+H I+G +V+ SD FWF RP +VL +IH +LFQNA
Sbjct: 310 LTLAIGTKLQAIISDMALEIQERHAVIQGMPLVNVSDRHFWFSRPALVLHIIHFILFQNA 369
Query: 69 FEIAFFFWL 77
FEI +FFW+
Sbjct: 370 FEITYFFWI 378
>AT1G42560.1 | chr1:15980209-15983328 REVERSE LENGTH=461
Length = 460
Score = 80.1 bits (196), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 36/69 (52%), Positives = 52/69 (75%)
Query: 9 MLLVVGTKLEHIITELAHQVAEKHTAIEGELVVSPSDELFWFHRPKIVLLLIHIVLFQNA 68
+ L +GTKL+ II+ +A ++ E+H I+G VV+ SD+ FWF +P +VL +IH VLFQNA
Sbjct: 317 LTLAIGTKLQAIISYMALEIQERHAVIQGMPVVNVSDQHFWFEKPDLVLHMIHFVLFQNA 376
Query: 69 FEIAFFFWL 77
FEI +FFW+
Sbjct: 377 FEITYFFWI 385
>AT1G61560.1 | chr1:22708875-22712032 REVERSE LENGTH=584
Length = 583
Score = 79.3 bits (194), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 36/70 (51%), Positives = 51/70 (72%)
Query: 7 FQMLLVVGTKLEHIITELAHQVAEKHTAIEGELVVSPSDELFWFHRPKIVLLLIHIVLFQ 66
F ++L+VGTKL+ IIT+L ++ EK ++G +V P D FWF RP+ +L LIH+VLF
Sbjct: 321 FIVILIVGTKLQVIITKLGLRIQEKGDVVKGTPLVQPGDHFFWFGRPRFILFLIHLVLFT 380
Query: 67 NAFEIAFFFW 76
NAF++AFF W
Sbjct: 381 NAFQLAFFVW 390
>AT1G11000.1 | chr1:3671935-3675909 REVERSE LENGTH=574
Length = 573
Score = 77.8 bits (190), Expect = 1e-15, Method: Composition-based stats.
Identities = 34/70 (48%), Positives = 50/70 (71%)
Query: 9 MLLVVGTKLEHIITELAHQVAEKHTAIEGELVVSPSDELFWFHRPKIVLLLIHIVLFQNA 68
++++VGTKLEH++++LA +V E+ T V P D LFWF +P+I+L LI ++FQNA
Sbjct: 310 LVMLVGTKLEHVVSKLALEVKEQQTGTSNGAQVKPRDGLFWFGKPEILLRLIQFIIFQNA 369
Query: 69 FEIAFFFWLL 78
FE+A F W L
Sbjct: 370 FEMATFIWFL 379
>AT2G17480.1 | chr2:7590559-7593768 REVERSE LENGTH=594
Length = 593
Score = 77.4 bits (189), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 32/69 (46%), Positives = 50/69 (72%)
Query: 9 MLLVVGTKLEHIITELAHQVAEKHTAIEGELVVSPSDELFWFHRPKIVLLLIHIVLFQNA 68
++L VGTKL+ I+T +A + ++H ++G +V +DE FWF RP ++L L+H LFQNA
Sbjct: 341 IILAVGTKLQAIMTRMALGITDRHAVVQGMPLVQGNDEYFWFGRPHLILHLMHFALFQNA 400
Query: 69 FEIAFFFWL 77
F+I +FFW+
Sbjct: 401 FQITYFFWI 409
>AT2G17430.1 | chr2:7568018-7570758 FORWARD LENGTH=543
Length = 542
Score = 70.5 bits (171), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 32/69 (46%), Positives = 47/69 (68%)
Query: 9 MLLVVGTKLEHIITELAHQVAEKHTAIEGELVVSPSDELFWFHRPKIVLLLIHIVLFQNA 68
++L VGTKL+ I+ +A ++ E H ++G +V SD FWF P+++L LIH LFQNA
Sbjct: 325 IILAVGTKLQAIMATMALEIVETHAVVQGMPLVQGSDRYFWFDCPQLLLHLIHFALFQNA 384
Query: 69 FEIAFFFWL 77
F+I FFW+
Sbjct: 385 FQITHFFWI 393
>AT5G53760.1 | chr5:21823055-21826289 FORWARD LENGTH=574
Length = 573
Score = 69.3 bits (168), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 33/68 (48%), Positives = 49/68 (72%), Gaps = 1/68 (1%)
Query: 9 MLLVVGTKLEHIITELAHQVAEKHTAIEGELVVSPSDELFWFHRPKIVLLLIHIVLFQNA 68
++L+VG KL+H+I LA + A T + + P DELFWF++P+++L LIH +LFQN+
Sbjct: 323 LVLLVGAKLQHVIATLALENA-GLTEYPSGVKLRPRDELFWFNKPELLLSLIHFILFQNS 381
Query: 69 FEIAFFFW 76
FE+A FFW
Sbjct: 382 FELASFFW 389
>AT1G26700.1 | chr1:9228300-9232237 FORWARD LENGTH=555
Length = 554
Score = 68.6 bits (166), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 33/68 (48%), Positives = 47/68 (69%), Gaps = 1/68 (1%)
Query: 9 MLLVVGTKLEHIITELAHQVAEKHTAIEGELVVSPSDELFWFHRPKIVLLLIHIVLFQNA 68
++L+VG KL+H+I LA + A G + + P DELFWF +P+++L LIH + FQNA
Sbjct: 318 LVLLVGAKLQHVIATLALENASITEYASG-IKLRPRDELFWFKKPELLLSLIHFIQFQNA 376
Query: 69 FEIAFFFW 76
FE+A FFW
Sbjct: 377 FELASFFW 384
>AT3G45290.1 | chr3:16617586-16621352 FORWARD LENGTH=509
Length = 508
Score = 64.3 bits (155), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 28/69 (40%), Positives = 45/69 (65%)
Query: 9 MLLVVGTKLEHIITELAHQVAEKHTAIEGELVVSPSDELFWFHRPKIVLLLIHIVLFQNA 68
++LV+GTKLE I+ ++A + E ++ I G +V +D FWF P+ +L ++H LF N
Sbjct: 312 IVLVIGTKLEMIVAKMAVTIKENNSVIRGTPLVESNDTHFWFSNPRFLLSILHYTLFLNT 371
Query: 69 FEIAFFFWL 77
FE+AF W+
Sbjct: 372 FEMAFIVWI 380
>AT5G65970.1 | chr5:26387509-26390407 REVERSE LENGTH=570
Length = 569
Score = 62.0 bits (149), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 31/69 (44%), Positives = 51/69 (73%)
Query: 9 MLLVVGTKLEHIITELAHQVAEKHTAIEGELVVSPSDELFWFHRPKIVLLLIHIVLFQNA 68
++L V TKL+ I+T +A + E+H ++G +V SD+ FWF+RP+++L L+H LFQNA
Sbjct: 323 IILAVSTKLQAILTRMALGITERHAVVQGIPLVHGSDKYFWFNRPQLLLHLLHFALFQNA 382
Query: 69 FEIAFFFWL 77
F++ +FFW+
Sbjct: 383 FQLTYFFWV 391
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.334 0.146 0.450
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 1,591,897
Number of extensions: 50873
Number of successful extensions: 217
Number of sequences better than 1.0e-05: 15
Number of HSP's gapped: 214
Number of HSP's successfully gapped: 15
Length of query: 82
Length of database: 11,106,569
Length adjustment: 53
Effective length of query: 29
Effective length of database: 9,653,521
Effective search space: 279952109
Effective search space used: 279952109
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 39 (21.6 bits)
S2: 105 (45.1 bits)