Os02g0556600
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Pherophorin-dz1 protein precursor.
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Os02g0556600 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Pherophorin-dz1 protein precursor.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 18.93 | 0.204 | 10.3 | -0.587 | 0.198 | 0.465 | 0.121 | -0.74 | -0.11 | 3.8 | 21.9 | 1246 | -- | -- |
| 19.4 | 0.205 | 10.3 | -0.384 | 0.268 | 0.427 | 0.135 | -- | -0.0558 | 3.59 | 20.74 | 1860 | -- | -- |
| 18.97 | 0.203 | 10.3 | -0.576 | 0.199 | 0.462 | -- | -0.697 | -0.107 | 3.63 | 22.02 | 1263 | -- | -- |
| 19.43 | 0.205 | 10.3 | -0.392 | 0.272 | 0.434 | -- | -- | -0.0574 | 3.72 | 20.7 | 1864 | -- | -- |
| 21.02 | 0.214 | 10.3 | -0.624 | -- | 0.525 | -- | -0.885 | -0.116 | -- | 22.68 | 1203 | -- | -- |
| 24.68 | 0.233 | 10.3 | -0.234 | 0.256 | -- | 0.095 | -- | 0.04 | 3.2 | -- | -- | -- | -- |
| 24.71 | 0.233 | 10.3 | -0.236 | 0.256 | -- | -- | -- | 0.0395 | 3.16 | -- | -- | -- | -- |
| 21.45 | 0.216 | 10.3 | -0.381 | -- | 0.456 | -- | -- | -0.0551 | -- | 21.68 | 1215 | -- | -- |
| 22.67 | 0.222 | 10.3 | -- | 0.213 | 0.307 | -- | -- | 0.0136 | 3.42 | 22.17 | 1293 | -- | -- |
| 28.45 | 0.249 | 10.3 | -0.225 | -- | -- | -- | -- | 0.0462 | -- | -- | -- | -- | -- |
| 26.19 | 0.239 | 10.3 | -- | 0.252 | -- | -- | -- | 0.0658 | 3.15 | -- | -- | -- | -- |
| 24.9 | 0.232 | 10.3 | -- | -- | 0.362 | -- | -- | 0.0079 | -- | 22.3 | 1203 | -- | -- |
| 29.79 | 0.255 | 10.3 | -- | -- | -- | -- | -- | 0.0712 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 18.79 | temperature | 15 | 270 | > th | dose dependent | rect. | 14 | 18 |
| 5 | 18.85 | temperature | 15 | 10 | > th | dose dependent | rect. | 16 | 16 |
| 26 | 19.10 | temperature | 20 | 1440 | > th | dose dependent | rect. | 16 | 5 |
| 28 | 19.11 | temperature | 20 | 1440 | > th | dose dependent | rect. | 13 | 18 |
| 38 | 19.13 | temperature | 20 | 1440 | > th | dose dependent | rect. | 13 | 9 |
| 51 | 19.14 | temperature | 20 | 1440 | > th | dose dependent | rect. | 2 | 19 |
| 59 | 19.15 | temperature | 20 | 1440 | > th | dose dependent | sin | 17 | NA |
| 67 | 19.15 | wind | 9 | 43200 | > th | dose dependent | rect. | 18 | 13 |
| 139 | 19.19 | temperature | 20 | 1440 | > th | dose dependent | no | NA | NA |
| 161 | 19.19 | temperature | 20 | 1440 | > th | dose dependent | rect. | 19 | 23 |
| 184 | 19.20 | temperature | 20 | 1440 | > th | dose dependent | rect. | 15 | 23 |
| 248 | 19.24 | temperature | 10 | 270 | > th | dose dependent | rect. | 13 | 9 |
| 281 | 19.26 | wind | 9 | 43200 | > th | dose independent | rect. | 18 | 14 |
| 407 | 19.35 | wind | 7 | 43200 | > th | dose independent | rect. | 6 | 1 |
| 504 | 19.40 | wind | 9 | 43200 | < th | dose independent | rect. | 18 | 14 |
| 507 | 19.40 | temperature | 20 | 1440 | > th | dose dependent | rect. | 6 | 1 |
| 646 | 19.46 | temperature | 25 | 1440 | > th | dose dependent | rect. | 11 | 3 |
| 802 | 19.54 | wind | 7 | 43200 | < th | dose independent | rect. | 6 | 1 |