BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os02g0556600 Os02g0556600|AK066206
(469 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G35470.2 | chr1:13051636-13054922 REVERSE LENGTH=468 495 e-140
AT4G09340.1 | chr4:5925015-5927597 REVERSE LENGTH=448 452 e-127
AT4G09310.1 | chr4:5902949-5905240 FORWARD LENGTH=398 254 1e-67
AT4G09200.1 | chr4:5859380-5861671 FORWARD LENGTH=398 254 1e-67
AT4G09250.1 | chr4:5876687-5878978 FORWARD LENGTH=350 222 3e-58
AT1G06060.1 | chr1:1833071-1834516 FORWARD LENGTH=214 76 4e-14
AT1G61150.1 | chr1:22542928-22544355 FORWARD LENGTH=244 73 3e-13
AT2G22010.2 | chr2:9363946-9368828 REVERSE LENGTH=1284 54 2e-07
AT4G09300.1 | chr4:5899008-5900689 FORWARD LENGTH=225 52 7e-07
AT1G11110.1 | chr1:3710364-3712108 FORWARD LENGTH=278 50 4e-06
>AT1G35470.2 | chr1:13051636-13054922 REVERSE LENGTH=468
Length = 467
Score = 495 bits (1274), Expect = e-140, Method: Compositional matrix adjust.
Identities = 236/407 (57%), Positives = 303/407 (74%), Gaps = 5/407 (1%)
Query: 55 LNTTNSSGLFAVVSTDRMSVRYLGVNQHGHDVGVVQANRPAPTRRAVYYFEMGVKNAGQK 114
LNT NS+G F VVS D++SV+Y N HGHDVGVVQAN+PAP + YYFE+ VK++G K
Sbjct: 53 LNTINSAGGFLVVSPDKLSVKYTNTNLHGHDVGVVQANKPAPIKCLTYYFEIFVKDSGIK 112
Query: 115 GQTSIGFTTENFKMRRQPGWESNSCGYHGDDGYLYRGPGKSESFGPKFTSGDTIGAGINY 174
GQ +IGFT E+FKMRRQPGWE NSCGYHGDDGYLYRG GK E FGPKFT D +G GINY
Sbjct: 113 GQIAIGFTKESFKMRRQPGWEVNSCGYHGDDGYLYRGQGKGEPFGPKFTKDDAVGGGINY 172
Query: 175 FSQEFFFTKNGSLVGSFQKEIKGPLYPTIAVHSQDEEVTVNFGKEPFCFDIEGYIFEEKM 234
SQEFFFTKNG++VG K+I+G L+PT+AVHSQ+EEV VNFGK+ F FDI+GY E+
Sbjct: 173 ASQEFFFTKNGTIVGKIPKDIRGHLFPTVAVHSQNEEVLVNFGKKKFAFDIKGYEASERN 232
Query: 235 KQQSVSDKLDLQPDISHWIVRSYLLHYGYQDTLNSFDMASETDPPSNH---QNGYGEPPE 291
KQQ +K+ + P+I + +V++YLLHYGY++TL++F++A++ P H +N E
Sbjct: 233 KQQLAIEKISIPPNIGYGLVKTYLLHYGYEETLDAFNLATKNTVPPIHIDQENAIDEDDS 292
Query: 292 MYGLSHRKLLRQLIMSGDIDSAFKKLGEWYPQVIKDETSIICFLLHSQRFIEFIGAGQLE 351
Y L RK LRQL+ +G+ID+A +L + YPQ+++D+ S++CFLLH Q+FIE + G+LE
Sbjct: 293 SYALKQRKNLRQLVRNGEIDTALAELQKLYPQIVQDDKSVVCFLLHCQKFIELVRVGKLE 352
Query: 352 DAVKYARSNLANFLTHKAFDGLLKESVALLAYEKPAESCIGYLLDSPQREFVADAVNAAV 411
+ V Y R LA F+ F ++++ ALLAYEKP ES + Y L+ QRE VADAVNAA+
Sbjct: 353 EGVNYGRLELAKFVGLTGFQDIVEDCFALLAYEKPEESSVWYFLEDSQRELVADAVNAAI 412
Query: 412 LSTNPNMKDPE-SC-LYSCLEKLLRQLTVCSFERRAFSGDQGDAFLL 456
LSTNPN KD + SC L S LEKLLRQLTVC ERR+ +GDQG+ F L
Sbjct: 413 LSTNPNKKDVQRSCHLQSHLEKLLRQLTVCCLERRSLNGDQGETFRL 459
>AT4G09340.1 | chr4:5925015-5927597 REVERSE LENGTH=448
Length = 447
Score = 452 bits (1162), Expect = e-127, Method: Compositional matrix adjust.
Identities = 218/414 (52%), Positives = 294/414 (71%), Gaps = 4/414 (0%)
Query: 55 LNTTNSSGLFAVVSTDRMSVRYLGVNQHGHDVGVVQANRPAPTRRAVYYFEMGVKNAGQK 114
LNT F V+S D++S++Y GV+QHGHDVGVVQAN+PAP +R YYFE+ VK+AG K
Sbjct: 32 LNTITGLSGFVVISPDKLSLKYTGVSQHGHDVGVVQANKPAPCKRFAYYFEIYVKDAGVK 91
Query: 115 GQTSIGFTTENFKMRRQPGWESNSCGYHGDDGYLYRGPGKSESFGPKFTSGDTIGAGINY 174
G+ SIGFTT +F++ R PGWE N+CGYHG+DG +Y G + E+FGP +T+GDT+G GINY
Sbjct: 92 GRVSIGFTTNSFRIARHPGWELNTCGYHGEDGLIYLGKRQGEAFGPTYTTGDTVGGGINY 151
Query: 175 FSQEFFFTKNGSLVGSFQKEIKGPLYPTIAVHSQDEEVTVNFGKEPFCFDIEGYIFEEKM 234
SQEFFFT NG+LVG+ K IKGPL+PT+AVHSQ+EEVTVNFG+E F FD +GY E+
Sbjct: 152 DSQEFFFTVNGTLVGTVSKYIKGPLFPTVAVHSQNEEVTVNFGQEKFAFDFKGYESSERN 211
Query: 235 KQQSVSDKLDLQPDISHWIVRSYLLHYGYQDTLNSFDMASE-TDPPSNHQNGYGEPPEMY 293
KQQ +K+ + ++S +V++YLLHYGY++T ++ D+A+ T PP N G Y
Sbjct: 212 KQQIAIEKISIPSNMSLGLVKNYLLHYGYEETHHALDLATNSTLPPINGAQENGIDDTSY 271
Query: 294 GLSHRKLLRQLIMSGDIDSAFKKLGEWYPQVIKDETSIICFLLHSQRFIEFIGAGQLEDA 353
L RK+LRQLI G+ID+A KL + YPQ+++++ S +CFLLH Q+FIE + G LE+A
Sbjct: 272 ALHERKILRQLIRKGEIDAALAKLRDSYPQLVQNDKSEVCFLLHCQKFIELVRIGALEEA 331
Query: 354 VKYARSNLANFLTHKAFDGLLKESVALLAYEKPAESCIGYLLDSPQREFVADAVNAAVLS 413
VKY R LA F+ F +L++ ALL YE+P ES +GY L+ QRE VAD VNAA+LS
Sbjct: 332 VKYGRMELAKFIGLTTFQDILEDCFALLVYERPEESNVGYFLEETQREVVADTVNAAILS 391
Query: 414 TNPNMKDPESCLYSCLEKLLRQLTVCSFERRAFSGDQGDAFLLHKEVQSCDRSR 467
T P K+ +S LE LLRQLT C E R+ + QG+AF L++ +++ + R
Sbjct: 392 TKPKGKNQS---HSHLETLLRQLTACCLELRSLNDGQGEAFSLNRLLRTNNWKR 442
>AT4G09310.1 | chr4:5902949-5905240 FORWARD LENGTH=398
Length = 397
Score = 254 bits (648), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 148/396 (37%), Positives = 220/396 (55%), Gaps = 20/396 (5%)
Query: 55 LNTTNSSGLFAVVSTDRMSVRYLGVNQHGHDVGVVQANRPAPTRRAVYYFEMGVKNAGQK 114
L T S F VS D +S +Y G + HD V+Q PAPT YYFE+ + NAG+K
Sbjct: 15 LYTVGGSDEFTFVSPDGLSGQYTGPD---HDGVVLQTENPAPTNCLAYYFEVHIMNAGEK 71
Query: 115 GQTSIGFTTENFKMRRQPGWESNSCGYHGDDGYLYRGPGKSESFGPK----FTSGDTIGA 170
G+ +IGF+ E+ G+ SC Y G+ G + G + K +T+GD +G
Sbjct: 72 GEIAIGFSKEHI---YSEGYTVRSCAYIGNSGLICSQNGDGDRTVAKASDTYTTGDLVGC 128
Query: 171 GINYFSQEFFFTKNGSLVGSFQKEIKGPLYPTIAVHSQDEEVTVNFGKE-PFCFDIEGYI 229
GI+ SQEFFFTKNG++VG+ ++ + P+YPTI +HSQ+E VTVNFG + F FD E +
Sbjct: 129 GIDSVSQEFFFTKNGTIVGTIPRQFRRPVYPTIVLHSQNEAVTVNFGGQIAFSFDFEHFE 188
Query: 230 FEEKMKQQSVSDKLDLQPDISHWIVRSYLLHYGYQDTLNSFDMASETDPPSNHQNGYGEP 289
++K++ +K+ + ISH +V++YLL YGY+D+ +F++A+ +N + E
Sbjct: 189 ESLRVKKEREIEKISMSRSISHGLVKTYLLRYGYEDSFRAFNLAASRHTVIAQENSFDE- 247
Query: 290 PEMYGLSHRKLLRQLIMSGDIDSAFKKLGEWYPQVIKDETSIICFLLHSQRFIEFIGAGQ 349
Y L RK LR+LIM+ +ID A L + YPQ+I+ + FLL Q+ +E + G
Sbjct: 248 ---YELHQRKKLRELIMTAEIDDAIAALKDRYPQLIEGGSEAY-FLLICQKIVELVRKGA 303
Query: 350 LEDAVKYARSNLANFLTHKAFDGLLKESVALLAYEKPAESCIGYLLDSPQREFVADAVNA 409
+ +A + + +F L + AL E ES YLL Q+ VA AV+
Sbjct: 304 IAEAKSFGNQDFKDFRDSSLLKNLFDDCSALFECETIEESGAAYLLGETQKNIVAAAVSE 363
Query: 410 AVLSTNPNMKDPESCLYSCLEKLLRQL-TVCSFERR 444
A+LSTNP +D +S + LE++LRQ CS R
Sbjct: 364 AILSTNPATRDQQS---ASLERVLRQFEATCSLYAR 396
>AT4G09200.1 | chr4:5859380-5861671 FORWARD LENGTH=398
Length = 397
Score = 254 bits (648), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 148/396 (37%), Positives = 220/396 (55%), Gaps = 20/396 (5%)
Query: 55 LNTTNSSGLFAVVSTDRMSVRYLGVNQHGHDVGVVQANRPAPTRRAVYYFEMGVKNAGQK 114
L T S F VS D +S +Y G + HD V+Q PAPT YYFE+ + NAG+K
Sbjct: 15 LYTVGGSDEFTFVSPDGLSGQYTGPD---HDGVVLQTENPAPTNCLAYYFEVHIMNAGEK 71
Query: 115 GQTSIGFTTENFKMRRQPGWESNSCGYHGDDGYLYRGPGKSESFGPK----FTSGDTIGA 170
G+ +IGF+ E+ G+ SC Y G+ G + G + K +T+GD +G
Sbjct: 72 GEIAIGFSKEHI---YSEGYTVRSCAYIGNSGLICSQNGDGDRTVAKASDTYTTGDLVGC 128
Query: 171 GINYFSQEFFFTKNGSLVGSFQKEIKGPLYPTIAVHSQDEEVTVNFGKE-PFCFDIEGYI 229
GI+ SQEFFFTKNG++VG+ ++ + P+YPTI +HSQ+E VTVNFG + F FD E +
Sbjct: 129 GIDSVSQEFFFTKNGTIVGTIPRQFRRPVYPTIVLHSQNEAVTVNFGGQIAFSFDFEHFE 188
Query: 230 FEEKMKQQSVSDKLDLQPDISHWIVRSYLLHYGYQDTLNSFDMASETDPPSNHQNGYGEP 289
++K++ +K+ + ISH +V++YLL YGY+D+ +F++A+ +N + E
Sbjct: 189 ESLRVKKEREIEKISMSRSISHGLVKTYLLRYGYEDSFRAFNLAASRHTVIAQENSFDE- 247
Query: 290 PEMYGLSHRKLLRQLIMSGDIDSAFKKLGEWYPQVIKDETSIICFLLHSQRFIEFIGAGQ 349
Y L RK LR+LIM+ +ID A L + YPQ+I+ + FLL Q+ +E + G
Sbjct: 248 ---YELHQRKKLRELIMTAEIDDAIAALKDRYPQLIEGGSEAY-FLLICQKIVELVRKGA 303
Query: 350 LEDAVKYARSNLANFLTHKAFDGLLKESVALLAYEKPAESCIGYLLDSPQREFVADAVNA 409
+ +A + + +F L + AL E ES YLL Q+ VA AV+
Sbjct: 304 IAEAKSFGNQDFKDFRDSSLLKNLFDDCSALFECETIEESGAAYLLGETQKNIVAAAVSE 363
Query: 410 AVLSTNPNMKDPESCLYSCLEKLLRQL-TVCSFERR 444
A+LSTNP +D +S + LE++LRQ CS R
Sbjct: 364 AILSTNPATRDQQS---ASLERVLRQFEATCSLYAR 396
>AT4G09250.1 | chr4:5876687-5878978 FORWARD LENGTH=350
Length = 349
Score = 222 bits (566), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 141/396 (35%), Positives = 203/396 (51%), Gaps = 68/396 (17%)
Query: 55 LNTTNSSGLFAVVSTDRMSVRYLGVNQHGHDVGVVQANRPAPTRRAVYYFEMGVKNAGQK 114
L T S F VS D +S +Y G + HD V+Q PAPT YYFE+ + NAG+K
Sbjct: 15 LYTVGGSDEFTFVSPDGLSGQYTGPD---HDGVVLQTENPAPTNCLAYYFEVHIMNAGEK 71
Query: 115 GQTSIGFTTENFKMRRQPGWESNSCGYHGDDGYLYRGPGKSESFGPK----FTSGDTIGA 170
G+ +IGF+ E+ G+ SC Y G+ G + G + K +T+GD +G
Sbjct: 72 GEIAIGFSKEHIY---SEGYTVRSCAYIGNSGLICSQNGDGDRTVAKASDTYTTGDLVGC 128
Query: 171 GINYFSQEFFFTKNGSLVGSFQKEIKGPLYPTIAVHSQDEEVTVNFGKE-PFCFDIEGYI 229
GI+ SQEFFFTKNG++VG+ ++ + P+YPTI +HSQ+E VTVNFG + F FD E +
Sbjct: 129 GIDSVSQEFFFTKNGTIVGTIPRQFRRPVYPTIVLHSQNEAVTVNFGGQIAFSFDFEHFE 188
Query: 230 FEEKMKQQSVSDKLDLQPDISHWIVRSYLLHYGYQDTLNSFDMASETDPPSNHQNGYGEP 289
++K++ +K+ + ISH +V++YLL YGY+D+ +F++A+ +N + E
Sbjct: 189 ESLRVKKEREIEKISMSRSISHGLVKTYLLRYGYEDSFRAFNLAASRHTVIAQENSFDE- 247
Query: 290 PEMYGLSHRKLLRQLIMSGDIDSAFKKLGEWYPQVIKDETSIICFLLHSQRFIEFIGAGQ 349
Y L RK LR+LIM+ +ID A L + YPQ+I+D C L IE
Sbjct: 248 ---YELHQRKKLRELIMTAEIDDAIAALKDRYPQLIED-----CSALFECETIE------ 293
Query: 350 LEDAVKYARSNLANFLTHKAFDGLLKESVALLAYEKPAESCIGYLLDSPQREFVADAVNA 409
ES YLL Q+ VA AV+
Sbjct: 294 --------------------------------------ESGAAYLLGETQKNIVAAAVSE 315
Query: 410 AVLSTNPNMKDPESCLYSCLEKLLRQL-TVCSFERR 444
A+LSTNP +D +S + LE++LRQ CS R
Sbjct: 316 AILSTNPATRDQQS---ASLERVLRQFEATCSLYAR 348
>AT1G06060.1 | chr1:1833071-1834516 FORWARD LENGTH=214
Length = 213
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 65/208 (31%), Positives = 108/208 (51%), Gaps = 26/208 (12%)
Query: 251 HWIVRSYLLHYGYQDTLNSFDMASETDPPSNHQNGYGEPP-EMYGLSHRKLLRQLIMSGD 309
H IV SYLLH + +T +S +AS T G +P + + RK + I+
Sbjct: 17 HSIVMSYLLHNCFNETADS--LASST--------GVKQPAIDRDNMERRKQIIHFILERK 66
Query: 310 IDSAFKKLGEWYPQVIKDETSIICFLLHSQRFIEFIGAGQLEDAVKYARSNLANFLTHKA 369
AF+ L E Q + ++ + F L F+E I AG +A+K+ ++ LA F K
Sbjct: 67 ALKAFE-LTEQLAQDLLEKNKDLQFDLLCLHFVELICAGNCTEALKFGKTRLAPFGKVKK 125
Query: 370 FDGLLKESVALLAYEKPAESCIGYLLDSPQREFVADAVNAAVL--STNPNMKDPESCLYS 427
+ L++ +ALLAYE P +S + +LL S R+ VAD +N +L + +P+ Y+
Sbjct: 126 YVEKLEDVMALLAYEDPEKSPMFHLLSSEYRQQVADNLNRTILEHTNHPS--------YT 177
Query: 428 CLEKLLRQLTVCSFERRAFSGDQG-DAF 454
+E++++Q+TV R+ + + G DAF
Sbjct: 178 PMERIIQQVTVV---RQYLTEENGKDAF 202
>AT1G61150.1 | chr1:22542928-22544355 FORWARD LENGTH=244
Length = 243
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 51/182 (28%), Positives = 97/182 (53%), Gaps = 14/182 (7%)
Query: 253 IVRSYLLHYGYQDTLNSFDMASETDPPSNHQNGYGEPPEMYGLSHRKLLRQLIMSGDIDS 312
+V ++L+ GY + F S T P + + ++ R +++ + +G+++
Sbjct: 47 LVMNFLVTEGYVEAAEKFQRESGTKPEID----------LATITDRMAVKKAVQNGNVED 96
Query: 313 AFKKLGEWYPQVIKDETSIICFLLHSQRFIEFIGAGQLEDAVKYARSNLA-NFLTHKAFD 371
A +K+ + P+++ D + F L QR IE I G+ E+A+++A+ LA ++AF
Sbjct: 97 AIEKVNDLNPEIL-DTNPELFFHLQQQRLIELIRQGKTEEALEFAQEELAPRGEENQAFL 155
Query: 372 GLLKESVALLAYEKPAESCIGYLLDSPQREFVADAVNAAVLSTNPNMKDPESCLYSCLEK 431
L+++VALL ++ + + LLD R A VNAA+L++ + KDP+ L S L+
Sbjct: 156 EELEKTVALLVFDDASTCPVKELLDLSHRLKTASEVNAAILTSQSHEKDPK--LPSLLKM 213
Query: 432 LL 433
L+
Sbjct: 214 LI 215
>AT2G22010.2 | chr2:9363946-9368828 REVERSE LENGTH=1284
Length = 1283
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/117 (29%), Positives = 58/117 (49%), Gaps = 19/117 (16%)
Query: 130 RQPGWESNSCGY-------HGDDGYLYRGP------GKSESFGPKFTSGDTIGAGINYFS 176
+Q GW + +C + DD Y + G ++E +G + +GD IG I+
Sbjct: 161 QQLGWATLACPFTDQKGVGDADDSYAFDGRRVSKWNKEAEPYGQSWVAGDVIGCCIDLNC 220
Query: 177 QEFFFTKNGSLVGSFQKEIK--GP---LYPTIAVHSQDEEVTVNFGKEPFCFDIEGY 228
E +F +NG +G+ I+ GP YP I++ SQ E +NFG PF + ++G+
Sbjct: 221 DEIYFYRNGVSLGAAFTGIRKLGPGFGYYPAISL-SQGERCELNFGAYPFKYPVDGF 276
>AT4G09300.1 | chr4:5899008-5900689 FORWARD LENGTH=225
Length = 224
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 49/185 (26%), Positives = 83/185 (44%), Gaps = 22/185 (11%)
Query: 253 IVRSYLLHYGYQDTLNSFDMASETDPPSNHQNGYGEPPEMYGLSHRKLLRQLIMSGDIDS 312
+V + L+ GY++ F S T P + + ++ R + + I S +++
Sbjct: 30 LVMNLLVAEGYREAAEKFKEESITMPEED----------LASMNERLEVIKAIESRNLED 79
Query: 313 AFKKLGEWYPQVIKDETSIICFLLHSQRFIEFIGAGQLEDAVKYARSNLANFL-THKAFD 371
A +KL P++IK F LH Q IE I + E+AV +A+ LA ++A
Sbjct: 80 AIEKLNALNPEIIK-----TSFHLHQQMLIELIREKKTEEAVAFAQEKLAPLAEENEALQ 134
Query: 372 GLLKESVALLAYEKPAESCIGYLLDSPQREFVADAVNAAVLSTNPNMKDPESCLYSCLEK 431
L+++V +L E L + Q A VN A+ ++ K PE LE+
Sbjct: 135 RELEKTVCILVTEGLPNCPSRELFHNSQWIRTASHVNEAIHTSQTGEKGPE------LER 188
Query: 432 LLRQL 436
LL++L
Sbjct: 189 LLKEL 193
>AT1G11110.1 | chr1:3710364-3712108 FORWARD LENGTH=278
Length = 277
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 63/245 (25%), Positives = 113/245 (46%), Gaps = 34/245 (13%)
Query: 205 VHSQDEEVTVNF-GKEPFCFDIEGYIFEEKMKQQSVSD-------KLDLQPDISHWIVRS 256
V DEE V +E + E ++ +E+ K+ +SD +++ + + +V +
Sbjct: 22 VEEADEENQVEAENEEAQISENEEFVIQEQPKKLIMSDVWEQYLTTAEIRKEDMNRLVMN 81
Query: 257 YLLHYGYQDTLNSFDMASETDPPSNHQNGYGEPPEMYGLSHRKLLRQLIMSGDIDSAFKK 316
+L+ GY + + F S T Q G +S R +++ I SGD++ A +K
Sbjct: 82 FLVVEGYLEAVEKFQKESGT-----KQVGVA------SISDRLAVKRDIESGDLEDAVEK 130
Query: 317 LGEWYPQVIKDETSIICFLLHSQRFIEFIGAG-QLEDAVKYARSNLANFLTHK-AFDGLL 374
L P+++K F L+ QRFIE I G +++ +A L + AF L
Sbjct: 131 LNAINPEILK-----TNFSLNQQRFIERIRIGVTIKETFNFAEKELKPLVEQNLAFLEEL 185
Query: 375 KESVALLAYEKPAE--SCIGYLLDSPQREFVADAVNAAVLSTNPNMKDPESCLYSCLEKL 432
++++A+L + + LLD+ + A VNAA+L++ +K P+ L L
Sbjct: 186 EKTMAILRFRDLPDIPEAERELLDNSRWFKTAAEVNAAILTSQTGLKCPK------LLDL 239
Query: 433 LRQLT 437
L+ LT
Sbjct: 240 LKMLT 244
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.319 0.135 0.409
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 9,967,885
Number of extensions: 442257
Number of successful extensions: 939
Number of sequences better than 1.0e-05: 10
Number of HSP's gapped: 925
Number of HSP's successfully gapped: 11
Length of query: 469
Length of database: 11,106,569
Length adjustment: 102
Effective length of query: 367
Effective length of database: 8,310,137
Effective search space: 3049820279
Effective search space used: 3049820279
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 113 (48.1 bits)