Os02g0542400
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
FiT-DB / Search/ Help/ Sample detail
|
Os02g0542400 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Conserved hypothetical protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = sin)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 160.9 | 0.596 | 8.9 | 0.757 | 1.9 | 1.59 | -0.508 | -1.74 | -0.249 | 16.9 | 24.1 | 611 | 23.3 | -- |
| 164.73 | 0.598 | 8.91 | 0.634 | 1.84 | 1.95 | -0.51 | -- | -0.217 | 16.9 | 24.01 | 575 | 22.4 | -- |
| 161.44 | 0.592 | 8.9 | 0.751 | 1.89 | 1.62 | -- | -1.75 | -0.258 | 16.9 | 24.1 | 611 | 23 | -- |
| 164.62 | 0.598 | 8.92 | 0.568 | 1.9 | 2.04 | -- | -- | -0.295 | 16.9 | 23.98 | 513 | 21.8 | -- |
| 188.1 | 0.639 | 8.89 | 0.486 | -- | 2.44 | -- | -1.11 | -0.409 | -- | 76.72 | 789 | 20.2 | -- |
| 194.69 | 0.654 | 8.96 | 0.239 | 1.94 | -- | -0.899 | -- | -0.521 | 16.2 | -- | -- | -- | -- |
| 196.95 | 0.657 | 8.97 | 0.23 | 1.94 | -- | -- | -- | -0.526 | 16.2 | -- | -- | -- | -- |
| 189.97 | 0.642 | 8.92 | 0.409 | -- | 2.47 | -- | -- | -0.425 | -- | 75.31 | 829 | 20.5 | -- |
| 172.29 | 0.611 | 8.94 | -- | 1.9 | 1.75 | -- | -- | -0.379 | 16.8 | 23.92 | 510 | 21.9 | -- |
| 399.92 | 0.934 | 8.96 | 0.152 | -- | -- | -- | -- | -0.578 | -- | -- | -- | -- | -- |
| 198.34 | 0.659 | 8.97 | -- | 1.93 | -- | -- | -- | -0.552 | 16.2 | -- | -- | -- | -- |
| 193.87 | 0.648 | 8.94 | -- | -- | 2.32 | -- | -- | -0.494 | -- | 89.57 | 807 | 20.3 | -- |
| 400.53 | 0.934 | 8.96 | -- | -- | -- | -- | -- | -0.595 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 152.38 | temperature | 15 | 270 | > th | dose dependent | rect. | 1 | 9 |
| 5 | 153.96 | temperature | 20 | 720 | < th | dose independent | rect. | 5 | 2 |
| 6 | 154.26 | temperature | 25 | 720 | < th | dose dependent | rect. | 4 | 4 |
| 8 | 154.56 | temperature | 25 | 720 | < th | dose dependent | rect. | 5 | 2 |
| 41 | 157.67 | temperature | 25 | 270 | < th | dose dependent | rect. | 5 | 8 |
| 45 | 157.87 | temperature | 25 | 270 | < th | dose dependent | rect. | 7 | 1 |
| 50 | 158.07 | temperature | 20 | 720 | > th | dose independent | rect. | 2 | 9 |
| 157 | 161.58 | temperature | 20 | 270 | > th | dose independent | rect. | 4 | 15 |
| 165 | 161.77 | temperature | 15 | 720 | > th | dose dependent | rect. | 1 | 5 |
| 246 | 163.24 | temperature | 25 | 720 | < th | dose dependent | sin | 6 | NA |
| 252 | 163.29 | temperature | 20 | 720 | > th | dose independent | rect. | 2 | 4 |
| 311 | 164.10 | temperature | 20 | 10 | > th | dose independent | rect. | 22 | 6 |
| 396 | 165.16 | humidity | 80 | 720 | > th | dose independent | rect. | 20 | 1 |
| 429 | 165.60 | temperature | 20 | 270 | > th | dose independent | rect. | 20 | 6 |
| 440 | 165.68 | temperature | 20 | 270 | > th | dose independent | rect. | 21 | 4 |
| 464 | 165.90 | temperature | 20 | 720 | < th | dose independent | sin | 6 | NA |
| 516 | 166.32 | humidity | 80 | 720 | > th | dose independent | rect. | 19 | 4 |
| 523 | 166.39 | humidity | 70 | 720 | > th | dose dependent | rect. | 20 | 1 |
| 529 | 166.45 | temperature | 20 | 720 | > th | dose independent | sin | 5 | NA |
| 561 | 166.81 | temperature | 15 | 720 | > th | dose dependent | sin | 7 | NA |
| 565 | 166.84 | temperature | 20 | 10 | > th | dose dependent | rect. | 4 | 8 |
| 636 | 167.38 | humidity | 70 | 720 | > th | dose dependent | rect. | 19 | 4 |
| 686 | 167.78 | temperature | 30 | 14400 | < th | dose independent | rect. | 16 | 2 |
| 692 | 167.82 | temperature | 30 | 14400 | > th | dose independent | rect. | 16 | 3 |
| 709 | 167.83 | temperature | 30 | 14400 | < th | dose independent | rect. | 16 | 12 |
| 721 | 167.86 | temperature | 30 | 14400 | < th | dose independent | rect. | 16 | 8 |
| 734 | 167.91 | radiation | 1 | 720 | < th | dose dependent | rect. | 5 | 4 |
| 737 | 167.94 | temperature | 30 | 14400 | > th | dose independent | rect. | 12 | 1 |
| 742 | 167.98 | temperature | 30 | 14400 | < th | dose independent | rect. | 12 | 1 |
| 748 | 168.02 | temperature | 30 | 14400 | > th | dose independent | sin | 13 | NA |
| 767 | 168.05 | temperature | 30 | 14400 | < th | dose independent | sin | 13 | NA |
| 820 | 168.20 | temperature | 30 | 14400 | > th | dose independent | rect. | 11 | 8 |
| 857 | 168.23 | temperature | 30 | 14400 | < th | dose independent | rect. | 11 | 8 |
| 862 | 168.23 | temperature | 30 | 14400 | < th | dose independent | rect. | 11 | 16 |
| 948 | 168.46 | temperature | 25 | 90 | < th | dose independent | rect. | 7 | 6 |
| 951 | 168.48 | temperature | 25 | 270 | < th | dose dependent | rect. | 9 | 1 |