Os02g0535700
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Protein of unknown function DUF1022 family protein.
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Os02g0535700 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Protein of unknown function DUF1022 family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 35.53 | 0.28 | 10 | 0.0359 | 0.596 | 0.803 | -0.503 | 1.15 | -0.247 | 8.51 | 9.486 | 19 | -- | -- |
| 36.58 | 0.282 | 10 | -0.131 | 0.593 | 0.844 | -0.379 | -- | -0.293 | 8.43 | 13.72 | 18 | -- | -- |
| 36.3 | 0.281 | 10 | -0.0135 | 0.597 | 0.827 | -- | 0.937 | -0.258 | 8.45 | 11.43 | 18 | -- | -- |
| 36.57 | 0.282 | 10 | -0.122 | 0.602 | 0.716 | -- | -- | -0.304 | 8.41 | 19 | 18 | -- | -- |
| 55.54 | 0.349 | 10 | -0.0432 | -- | 0.911 | -- | 0.783 | -0.268 | -- | 13.8 | 11 | -- | -- |
| 43.47 | 0.309 | 10 | 0.034 | 0.641 | -- | -0.268 | -- | -0.173 | 9.88 | -- | -- | -- | -- |
| 43.74 | 0.31 | 10 | 0.024 | 0.642 | -- | -- | -- | -0.174 | 9.93 | -- | -- | -- | -- |
| 55.65 | 0.349 | 10.1 | -0.138 | -- | 0.778 | -- | -- | -0.297 | -- | 18.5 | 14 | -- | -- |
| 36.97 | 0.283 | 10 | -- | 0.588 | 0.67 | -- | -- | -0.278 | 8.45 | 18.99 | 18 | -- | -- |
| 68.47 | 0.387 | 10 | 0.0166 | -- | -- | -- | -- | -0.174 | -- | -- | -- | -- | -- |
| 43.75 | 0.309 | 10 | -- | 0.642 | -- | -- | -- | -0.176 | 9.93 | -- | -- | -- | -- |
| 56.05 | 0.349 | 10.1 | -- | -- | 0.745 | -- | -- | -0.278 | -- | 18.64 | 2 | -- | -- |
| 68.47 | 0.386 | 10 | -- | -- | -- | -- | -- | -0.175 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 34.51 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 17 | 2 |
| 2 | 34.62 | temperature | 20.0 | 30 | > th | dose dependent | rect. | 7 | 19 |
| 5 | 34.75 | radiation | 1.0 | 43200 | < th | dose dependent | rect. | 20 | 7 |
| 6 | 34.78 | temperature | 25.0 | 4320 | > th | dose dependent | rect. | 6 | 1 |
| 8 | 34.86 | temperature | 25.0 | 4320 | > th | dose dependent | rect. | 3 | 4 |
| 13 | 34.97 | temperature | 20.0 | 10 | > th | dose dependent | rect. | 7 | 22 |
| 24 | 35.08 | temperature | 20.0 | 30 | > th | dose dependent | rect. | 7 | 15 |
| 26 | 35.10 | temperature | 20.0 | 30 | > th | dose dependent | rect. | 19 | 23 |
| 34 | 35.23 | temperature | 25.0 | 90 | > th | dose dependent | sin | 10 | NA |
| 35 | 35.24 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 17 | 4 |
| 38 | 35.31 | temperature | 20.0 | 30 | > th | dose dependent | rect. | 4 | 22 |
| 62 | 35.48 | temperature | 20.0 | 10 | > th | dose dependent | rect. | 13 | 23 |
| 73 | 35.57 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 17 | 1 |
| 75 | 35.57 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 20 | 1 |
| 76 | 35.57 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 17 | 1 |
| 78 | 35.58 | temperature | 10.0 | 10 | > th | dose dependent | no | NA | NA |
| 86 | 35.61 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 17 | 1 |
| 88 | 35.61 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 23 | 19 |
| 98 | 35.66 | temperature | 25.0 | 4320 | > th | dose independent | rect. | 6 | 1 |
| 100 | 35.67 | temperature | 25.0 | 720 | > th | dose dependent | sin | 7 | NA |
| 103 | 35.67 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 17 | 10 |
| 105 | 35.67 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 20 | 22 |
| 107 | 35.69 | temperature | 25.0 | 720 | > th | dose dependent | rect. | 21 | 14 |
| 117 | 35.73 | temperature | 30.0 | 4320 | < th | dose independent | rect. | 9 | 1 |
| 122 | 35.76 | temperature | 25.0 | 4320 | < th | dose independent | rect. | 6 | 1 |
| 129 | 35.79 | humidity | 50.0 | 14400 | > th | dose independent | rect. | 16 | 19 |
| 136 | 35.81 | temperature | 20.0 | 30 | > th | dose dependent | rect. | 23 | 23 |
| 137 | 35.82 | temperature | 30.0 | 4320 | > th | dose independent | rect. | 9 | 3 |
| 157 | 35.84 | temperature | 30.0 | 4320 | > th | dose independent | rect. | 11 | 1 |
| 161 | 35.84 | wind | 9.0 | 14400 | > th | dose dependent | rect. | 18 | 17 |
| 166 | 35.86 | temperature | 30.0 | 4320 | < th | dose independent | rect. | 2 | 8 |
| 174 | 35.86 | temperature | 30.0 | 4320 | < th | dose independent | rect. | 21 | 13 |
| 181 | 35.87 | temperature | 30.0 | 4320 | < th | dose independent | rect. | 4 | 7 |
| 200 | 35.87 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 4 | 14 |
| 222 | 35.89 | temperature | 30.0 | 270 | < th | dose independent | rect. | 9 | 9 |
| 236 | 35.91 | humidity | 50.0 | 14400 | < th | dose independent | rect. | 16 | 19 |
| 242 | 35.91 | temperature | 20.0 | 10 | > th | dose dependent | rect. | 15 | 23 |
| 247 | 35.93 | temperature | 30.0 | 4320 | < th | dose independent | rect. | 14 | 2 |
| 259 | 35.96 | temperature | 30.0 | 4320 | > th | dose dependent | rect. | 11 | 1 |
| 262 | 35.97 | temperature | 30.0 | 4320 | > th | dose independent | rect. | 14 | 1 |
| 270 | 35.99 | humidity | 60.0 | 4320 | < th | dose independent | rect. | 12 | 1 |
| 272 | 35.99 | temperature | 30.0 | 720 | > th | dose independent | rect. | 8 | 8 |
| 288 | 35.99 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 13 | 5 |
| 293 | 36.00 | temperature | 25.0 | 720 | > th | dose dependent | rect. | 1 | 8 |
| 296 | 36.01 | temperature | 25.0 | 4320 | > th | dose independent | rect. | 1 | 6 |
| 302 | 36.02 | temperature | 25.0 | 720 | > th | dose dependent | rect. | 20 | 17 |
| 322 | 36.04 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 14 | 4 |
| 323 | 36.04 | temperature | 25.0 | 720 | > th | dose dependent | rect. | 5 | 2 |
| 324 | 36.04 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 14 | 4 |
| 327 | 36.05 | temperature | 30.0 | 720 | < th | dose independent | rect. | 1 | 14 |
| 343 | 36.07 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 14 | 4 |
| 354 | 36.08 | temperature | 20.0 | 10 | > th | dose dependent | rect. | 1 | 23 |
| 355 | 36.09 | temperature | 30.0 | 720 | > th | dose independent | sin | 4 | NA |
| 356 | 36.09 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 16 | 2 |
| 360 | 36.09 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 16 | 2 |
| 363 | 36.09 | temperature | 25.0 | 90 | > th | dose dependent | rect. | 19 | 14 |
| 367 | 36.10 | temperature | 30.0 | 270 | < th | dose independent | rect. | 9 | 21 |
| 387 | 36.11 | wind | 9.0 | 14400 | < th | dose independent | rect. | 18 | 6 |
| 388 | 36.11 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 17 | 6 |
| 389 | 36.11 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 17 | 6 |
| 395 | 36.11 | temperature | 30.0 | 30 | < th | dose dependent | rect. | 21 | 23 |
| 415 | 36.13 | temperature | 25.0 | 4320 | < th | dose independent | rect. | 3 | 4 |
| 416 | 36.13 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 17 | 6 |
| 436 | 36.13 | temperature | 30.0 | 4320 | < th | dose independent | rect. | 14 | 22 |
| 475 | 36.15 | atmosphere | 1000.0 | 43200 | < th | dose independent | rect. | 11 | 2 |
| 477 | 36.15 | temperature | 30.0 | 4320 | > th | dose independent | rect. | 14 | 22 |
| 491 | 36.17 | humidity | 60.0 | 4320 | > th | dose independent | rect. | 12 | 1 |
| 505 | 36.19 | atmosphere | 1000.0 | 43200 | > th | dose independent | rect. | 11 | 2 |
| 531 | 36.20 | wind | 9.0 | 14400 | < th | dose independent | rect. | 18 | 9 |
| 542 | 36.21 | temperature | 30.0 | 1440 | < th | dose independent | sin | 6 | NA |
| 549 | 36.21 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 8 | 10 |
| 554 | 36.21 | wind | 9.0 | 14400 | > th | dose dependent | rect. | 18 | 6 |
| 558 | 36.21 | wind | 9.0 | 14400 | > th | dose dependent | rect. | 18 | 10 |
| 559 | 36.21 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 8 | 10 |
| 574 | 36.23 | wind | 9.0 | 14400 | > th | dose independent | rect. | 18 | 6 |
| 592 | 36.24 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 6 | 12 |
| 601 | 36.24 | temperature | 30.0 | 4320 | > th | dose dependent | sin | 7 | NA |
| 606 | 36.24 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 6 | 12 |
| 611 | 36.24 | temperature | 30.0 | 30 | < th | dose dependent | rect. | 9 | 23 |
| 628 | 36.26 | temperature | 30.0 | 4320 | > th | dose independent | sin | 8 | NA |
| 707 | 36.29 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 6 | 12 |
| 738 | 36.30 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 8 | 10 |
| 894 | 36.34 | radiation | 1.0 | 43200 | < th | dose dependent | rect. | 1 | 1 |
| 955 | 36.35 | temperature | 30.0 | 30 | < th | dose dependent | rect. | 17 | 23 |
| 957 | 36.36 | temperature | 25.0 | 4320 | > th | dose independent | rect. | 19 | 1 |
| 1000 | 36.36 | wind | 5.0 | 14400 | > th | dose dependent | rect. | 20 | 1 |