Os02g0527200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os02g0527200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 354.13 | 0.884 | 3.43 | -0.414 | 1.98 | -1.84 | 0.294 | 0.794 | -0.341 | 3.06 | 0.3575 | 281 | -- | -- |
| 354.64 | 0.877 | 3.43 | -0.405 | 2 | -1.86 | 1.14 | -- | -0.348 | 3.06 | 0.328 | 282 | -- | -- |
| 354.15 | 0.876 | 3.43 | -0.422 | 1.97 | -1.83 | -- | 1.01 | -0.342 | 3.08 | 0.34 | 282 | -- | -- |
| 359.4 | 0.883 | 3.43 | -0.406 | 1.96 | -1.81 | -- | -- | -0.337 | 3.13 | 0.36 | 284 | -- | -- |
| 372.92 | 0.904 | 3.42 | -0.265 | -- | -0.405 | -- | 0.924 | -0.276 | -- | 0.34 | 282 | -- | -- |
| 374.54 | 0.907 | 3.4 | -0.196 | 0.563 | -- | -0.697 | -- | -0.262 | 9.91 | -- | -- | -- | -- |
| 376.35 | 0.908 | 3.4 | -0.225 | 0.571 | -- | -- | -- | -0.264 | 9.66 | -- | -- | -- | -- |
| 377.29 | 0.905 | 3.42 | -0.241 | -- | -0.414 | -- | -- | -0.26 | -- | 0.6562 | 49 | -- | -- |
| 363.64 | 0.888 | 3.43 | -- | 1.83 | -1.68 | -- | -- | -0.3 | 3.22 | 0.3614 | 286 | -- | -- |
| 395.66 | 0.929 | 3.42 | -0.229 | -- | -- | -- | -- | -0.263 | -- | -- | -- | -- | -- |
| 377.68 | 0.909 | 3.4 | -- | 0.571 | -- | -- | -- | -0.239 | 9.69 | -- | -- | -- | -- |
| 378.86 | 0.907 | 3.41 | -- | -- | -0.415 | -- | -- | -0.246 | -- | 0.6711 | 46 | -- | -- |
| 397.04 | 0.93 | 3.41 | -- | -- | -- | -- | -- | -0.238 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 351.21 | wind | 1.0 | 270 | > th | dose dependent | rect. | 12 | 9 |
| 3 | 351.38 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 5 | 15 |
| 5 | 351.56 | humidity | 70.0 | 30 | > th | dose dependent | rect. | 11 | 20 |
| 11 | 351.74 | humidity | 70.0 | 270 | > th | dose dependent | rect. | 8 | 20 |
| 15 | 352.01 | humidity | 50.0 | 270 | > th | dose dependent | rect. | 8 | 20 |
| 26 | 352.35 | precipitation | 0.1 | 10 | < th | dose independent | rect. | 21 | 10 |
| 27 | 352.35 | precipitation | 0.1 | 10 | < th | dose dependent | rect. | 21 | 10 |
| 29 | 352.58 | wind | 1.0 | 30 | > th | dose dependent | rect. | 14 | 19 |
| 34 | 352.88 | humidity | 60.0 | 14400 | < th | dose independent | rect. | 18 | 2 |
| 51 | 353.11 | humidity | 70.0 | 14400 | < th | dose dependent | rect. | 19 | 12 |
| 54 | 353.17 | humidity | 70.0 | 14400 | < th | dose dependent | rect. | 19 | 3 |
| 63 | 353.19 | radiation | 1.0 | 270 | > th | dose independent | rect. | 12 | 21 |
| 67 | 353.26 | humidity | 50.0 | 14400 | < th | dose dependent | rect. | 16 | 2 |
| 84 | 353.27 | radiation | 1.0 | 270 | < th | dose dependent | sin | 13 | NA |
| 88 | 353.37 | temperature | 10.0 | 10 | > th | dose dependent | rect. | 7 | 14 |
| 92 | 353.51 | wind | 3.0 | 270 | > th | dose independent | rect. | 12 | 9 |
| 97 | 353.60 | humidity | 60.0 | 14400 | > th | dose independent | rect. | 18 | 2 |
| 101 | 353.67 | humidity | 60.0 | 14400 | > th | dose independent | rect. | 18 | 8 |
| 104 | 353.69 | wind | 1.0 | 10 | > th | dose independent | rect. | 1 | 10 |
| 109 | 353.78 | humidity | 60.0 | 14400 | > th | dose independent | rect. | 18 | 5 |
| 117 | 353.82 | humidity | 60.0 | 14400 | > th | dose independent | rect. | 18 | 12 |
| 128 | 353.83 | radiation | 1.0 | 270 | > th | dose independent | rect. | 14 | 18 |
| 153 | 354.12 | radiation | 1.0 | 270 | < th | dose dependent | rect. | 19 | 20 |
| 155 | 354.21 | radiation | 1.0 | 270 | > th | dose independent | sin | 13 | NA |
| 158 | 354.23 | humidity | 70.0 | 90 | > th | dose independent | rect. | 10 | 7 |
| 160 | 354.25 | radiation | 1.0 | 270 | < th | dose dependent | rect. | 7 | 21 |
| 171 | 354.37 | wind | 1.0 | 30 | > th | dose independent | rect. | 14 | 21 |
| 174 | 354.38 | humidity | 70.0 | 90 | > th | dose independent | rect. | 10 | 20 |
| 185 | 354.58 | humidity | 50.0 | 14400 | > th | dose independent | rect. | 17 | 16 |
| 195 | 354.70 | radiation | 1.0 | 270 | < th | dose independent | sin | 13 | NA |
| 198 | 354.72 | wind | 5.0 | 90 | > th | dose independent | rect. | 3 | 4 |
| 202 | 354.75 | radiation | 10.0 | 90 | < th | dose dependent | rect. | 20 | 11 |
| 205 | 354.78 | radiation | 20.0 | 10 | < th | dose dependent | rect. | 21 | 10 |
| 206 | 354.80 | temperature | 20.0 | 10 | > th | dose independent | rect. | 7 | 14 |
| 226 | 354.91 | wind | 1.0 | 30 | > th | dose dependent | rect. | 14 | 9 |
| 227 | 354.92 | humidity | 50.0 | 14400 | < th | dose independent | rect. | 16 | 1 |
| 229 | 354.92 | wind | 1.0 | 30 | > th | dose dependent | rect. | 14 | 21 |
| 235 | 354.95 | temperature | 15.0 | 90 | > th | dose independent | rect. | 6 | 15 |
| 242 | 355.00 | humidity | 70.0 | 270 | > th | dose independent | rect. | 8 | 20 |
| 278 | 355.27 | atmosphere | 1000.0 | 90 | > th | dose independent | rect. | 21 | 9 |
| 279 | 355.27 | humidity | 50.0 | 270 | > th | dose dependent | rect. | 8 | 7 |
| 284 | 355.33 | precipitation | 0.1 | 90 | > th | dose dependent | rect. | 24 | 11 |
| 288 | 355.35 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 13 | 8 |
| 293 | 355.37 | atmosphere | 995.0 | 1440 | > th | dose dependent | rect. | 14 | 1 |
| 301 | 355.43 | atmosphere | 1015.0 | 1440 | < th | dose dependent | rect. | 15 | 1 |
| 302 | 355.44 | precipitation | 0.1 | 10 | > th | dose independent | rect. | 1 | 5 |
| 306 | 355.44 | precipitation | 0.1 | 10 | > th | dose dependent | rect. | 1 | 5 |
| 335 | 355.54 | humidity | 50.0 | 14400 | < th | dose independent | rect. | 16 | 17 |
| 347 | 355.60 | atmosphere | 1000.0 | 90 | < th | dose independent | rect. | 24 | 3 |
| 363 | 355.67 | precipitation | 0.1 | 10 | > th | dose independent | rect. | 3 | 3 |
| 369 | 355.67 | precipitation | 0.1 | 10 | > th | dose dependent | rect. | 3 | 3 |
| 379 | 355.69 | precipitation | 0.1 | 90 | > th | dose dependent | rect. | 3 | 8 |
| 382 | 355.70 | atmosphere | 1000.0 | 10 | > th | dose independent | rect. | 21 | 10 |
| 384 | 355.70 | temperature | 10.0 | 30 | > th | dose dependent | rect. | 14 | 21 |
| 391 | 355.73 | precipitation | 0.1 | 90 | > th | dose dependent | rect. | 24 | 5 |
| 402 | 355.77 | radiation | 1.0 | 270 | < th | dose independent | rect. | 8 | 20 |
| 408 | 355.80 | humidity | 60.0 | 30 | > th | dose dependent | rect. | 11 | 14 |
| 411 | 355.81 | radiation | 1.0 | 30 | > th | dose independent | rect. | 18 | 17 |
| 443 | 355.87 | wind | 3.0 | 30 | > th | dose independent | rect. | 14 | 9 |
| 457 | 355.95 | atmosphere | 1000.0 | 90 | < th | dose dependent | rect. | 24 | 3 |
| 533 | 356.08 | wind | 7.0 | 10 | < th | dose independent | rect. | 21 | 10 |
| 534 | 356.08 | precipitation | 0.1 | 90 | > th | dose dependent | rect. | 3 | 2 |
| 538 | 356.10 | humidity | 50.0 | 10 | > th | dose dependent | rect. | 21 | 10 |
| 544 | 356.12 | precipitation | 0.1 | 10 | > th | dose dependent | sin | 4 | NA |
| 557 | 356.13 | radiation | 20.0 | 14400 | > th | dose dependent | rect. | 7 | 1 |
| 564 | 356.15 | humidity | 90.0 | 270 | < th | dose independent | rect. | 13 | 7 |
| 565 | 356.16 | precipitation | 0.1 | 90 | > th | dose independent | rect. | 4 | 1 |
| 588 | 356.18 | radiation | 1.0 | 90 | < th | dose independent | rect. | 20 | 21 |
| 593 | 356.20 | wind | 9.0 | 30 | < th | dose dependent | rect. | 11 | 14 |
| 614 | 356.22 | wind | 7.0 | 90 | < th | dose independent | rect. | 20 | 10 |
| 654 | 356.26 | radiation | 20.0 | 14400 | < th | dose independent | rect. | 17 | 15 |
| 685 | 356.30 | precipitation | 0.1 | 90 | > th | dose independent | rect. | 1 | 10 |
| 710 | 356.32 | wind | 5.0 | 90 | > th | dose dependent | rect. | 3 | 4 |
| 719 | 356.34 | radiation | 20.0 | 14400 | < th | dose independent | rect. | 5 | 3 |
| 734 | 356.36 | radiation | 20.0 | 14400 | < th | dose independent | rect. | 22 | 10 |
| 736 | 356.36 | radiation | 20.0 | 14400 | < th | dose independent | rect. | 20 | 12 |
| 779 | 356.41 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 9 | 18 |
| 788 | 356.43 | wind | 9.0 | 270 | < th | dose dependent | rect. | 9 | 13 |
| 792 | 356.45 | radiation | 20.0 | 14400 | > th | dose independent | rect. | 6 | 2 |
| 829 | 356.49 | wind | 1.0 | 30 | > th | dose dependent | rect. | 14 | 14 |
| 838 | 356.52 | radiation | 10.0 | 90 | < th | dose independent | rect. | 20 | 11 |
| 863 | 356.54 | precipitation | 0.1 | 10 | > th | dose independent | sin | 4 | NA |
| 869 | 356.55 | wind | 1.0 | 10 | > th | dose independent | rect. | 7 | 14 |
| 877 | 356.58 | precipitation | 0.1 | 90 | > th | dose independent | rect. | 3 | 8 |
| 905 | 356.65 | precipitation | 0.1 | 10 | < th | dose independent | sin | 3 | NA |
| 908 | 356.65 | precipitation | 0.1 | 10 | < th | dose dependent | sin | 3 | NA |
| 997 | 356.76 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 5 | 14 |