Os02g0523800
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Inositol polyphosphate kinase family protein.
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Os02g0523800 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Inositol polyphosphate kinase family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 138.73 | 0.553 | 8.28 | 0.28 | 0.659 | -0.837 | -1.04 | 4.32 | -0.313 | 4.67 | 25.56 | 852 | -- | -- |
| 143.09 | 0.557 | 8.37 | -0.456 | 0.716 | -0.446 | -1.24 | -- | -0.47 | 5.08 | 24.44 | 863 | -- | -- |
| 141.33 | 0.554 | 8.27 | 0.356 | 0.655 | -0.865 | -- | 5.01 | -0.316 | 4.91 | 26 | 849 | -- | -- |
| 146.49 | 0.564 | 8.37 | -0.474 | 0.728 | -0.388 | -- | -- | -0.466 | 5.18 | 24.51 | 894 | -- | -- |
| 156.9 | 0.583 | 8.27 | 0.49 | -- | -1.23 | -- | 5.88 | -0.226 | -- | 24.96 | 601 | -- | -- |
| 147.09 | 0.569 | 8.38 | -0.573 | 0.791 | -- | -1.08 | -- | -0.515 | 5.51 | -- | -- | -- | -- |
| 149.87 | 0.573 | 8.37 | -0.576 | 0.787 | -- | -- | -- | -0.51 | 5.72 | -- | -- | -- | -- |
| 164.71 | 0.598 | 8.33 | -0.243 | -- | -0.991 | -- | -- | -0.316 | -- | 17.19 | 220 | -- | -- |
| 152.15 | 0.574 | 8.35 | -- | 0.716 | -0.505 | -- | -- | -0.401 | 5.06 | 24.15 | 897 | -- | -- |
| 182 | 0.63 | 8.39 | -0.551 | -- | -- | -- | -- | -0.491 | -- | -- | -- | -- | -- |
| 158.61 | 0.589 | 8.36 | -- | 0.778 | -- | -- | -- | -0.445 | 5.76 | -- | -- | -- | -- |
| 167.21 | 0.602 | 8.34 | -- | -- | -1.04 | -- | -- | -0.297 | -- | 17.5 | 230 | -- | -- |
| 190.01 | 0.643 | 8.37 | -- | -- | -- | -- | -- | -0.43 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 129.14 | temperature | 25 | 270 | < th | dose independent | rect. | 13 | 18 |
| 12 | 130.86 | temperature | 25 | 270 | < th | dose independent | rect. | 13 | 8 |
| 13 | 130.92 | temperature | 25 | 90 | > th | dose independent | rect. | 11 | 16 |
| 22 | 131.45 | radiation | 40 | 1440 | < th | dose dependent | rect. | 21 | 8 |
| 34 | 132.19 | temperature | 25 | 270 | > th | dose independent | rect. | 11 | 14 |
| 37 | 132.38 | temperature | 25 | 10 | > th | dose independent | rect. | 11 | 15 |
| 43 | 132.71 | temperature | 25 | 270 | > th | dose dependent | rect. | 22 | 2 |
| 55 | 132.90 | temperature | 25 | 270 | > th | dose independent | rect. | 22 | 2 |
| 56 | 132.90 | temperature | 25 | 720 | > th | dose dependent | rect. | 15 | 2 |
| 57 | 132.92 | temperature | 25 | 720 | > th | dose independent | rect. | 15 | 3 |
| 66 | 133.23 | temperature | 25 | 270 | > th | dose independent | rect. | 13 | 12 |
| 71 | 133.30 | temperature | 20 | 270 | > th | dose dependent | rect. | 20 | 6 |
| 72 | 133.33 | temperature | 25 | 270 | > th | dose independent | sin | 15 | NA |
| 74 | 133.33 | temperature | 20 | 90 | > th | dose dependent | rect. | 22 | 5 |
| 82 | 133.47 | temperature | 10 | 30 | > th | dose dependent | rect. | 11 | 16 |
| 84 | 133.51 | temperature | 25 | 270 | > th | dose independent | rect. | 20 | 5 |
| 87 | 133.53 | temperature | 30 | 270 | < th | dose dependent | rect. | 14 | 17 |
| 95 | 133.58 | temperature | 30 | 90 | < th | dose dependent | rect. | 16 | 17 |
| 100 | 133.62 | temperature | 25 | 270 | < th | dose independent | sin | 16 | NA |
| 127 | 133.89 | radiation | 40 | 4320 | < th | dose dependent | rect. | 23 | 6 |
| 140 | 134.08 | radiation | 1 | 90 | > th | dose independent | rect. | 9 | 10 |
| 169 | 134.18 | wind | 1 | 4320 | < th | dose dependent | rect. | 7 | 1 |
| 177 | 134.25 | radiation | 1 | 90 | > th | dose independent | sin | 22 | NA |
| 189 | 134.36 | temperature | 25 | 270 | > th | dose independent | rect. | 16 | 9 |
| 199 | 134.40 | radiation | 1 | 270 | > th | dose independent | rect. | 7 | 11 |
| 205 | 134.43 | radiation | 1 | 90 | < th | dose dependent | sin | 22 | NA |
| 213 | 134.49 | temperature | 25 | 720 | > th | dose dependent | rect. | 13 | 12 |
| 228 | 134.58 | temperature | 30 | 270 | < th | dose dependent | rect. | 15 | 5 |
| 235 | 134.60 | radiation | 10 | 1440 | < th | dose independent | rect. | 21 | 8 |
| 236 | 134.60 | temperature | 25 | 10 | < th | dose dependent | rect. | 16 | 4 |
| 239 | 134.61 | temperature | 30 | 90 | < th | dose dependent | rect. | 15 | 8 |
| 293 | 134.82 | wind | 1 | 4320 | < th | dose independent | rect. | 7 | 1 |
| 301 | 134.85 | humidity | 50 | 270 | > th | dose independent | rect. | 3 | 17 |
| 361 | 135.07 | temperature | 25 | 10 | < th | dose dependent | rect. | 13 | 8 |
| 373 | 135.14 | temperature | 30 | 90 | < th | dose dependent | rect. | 13 | 10 |
| 377 | 135.16 | wind | 1 | 30 | > th | dose independent | rect. | 4 | 16 |
| 380 | 135.17 | radiation | 1 | 90 | < th | dose independent | sin | 22 | NA |
| 395 | 135.21 | radiation | 20 | 14400 | < th | dose independent | rect. | 21 | 9 |
| 408 | 135.23 | radiation | 1 | 270 | < th | dose dependent | rect. | 3 | 17 |
| 455 | 135.34 | temperature | 25 | 270 | > th | dose dependent | rect. | 20 | 11 |
| 474 | 135.40 | temperature | 25 | 720 | > th | dose dependent | sin | 15 | NA |
| 481 | 135.43 | wind | 1 | 4320 | > th | dose independent | rect. | 7 | 1 |
| 502 | 135.50 | radiation | 10 | 1440 | < th | dose independent | rect. | 23 | 6 |
| 546 | 135.61 | temperature | 25 | 270 | > th | dose dependent | rect. | 22 | 8 |
| 552 | 135.62 | temperature | 20 | 90 | > th | dose dependent | rect. | 16 | 11 |
| 598 | 135.75 | radiation | 1 | 270 | < th | dose dependent | rect. | 4 | 14 |
| 624 | 135.83 | temperature | 10 | 1440 | > th | dose independent | rect. | 21 | 8 |
| 627 | 135.83 | temperature | 30 | 1440 | < th | dose independent | rect. | 21 | 8 |
| 631 | 135.83 | humidity | 50 | 1440 | > th | dose independent | rect. | 21 | 8 |
| 637 | 135.83 | atmosphere | 995 | 1440 | > th | dose independent | rect. | 21 | 8 |
| 651 | 135.83 | temperature | 10 | 1440 | > th | dose independent | rect. | 5 | 16 |
| 660 | 135.85 | temperature | 20 | 10 | > th | dose dependent | rect. | 16 | 12 |
| 704 | 135.97 | wind | 1 | 43200 | > th | dose independent | rect. | 6 | 2 |
| 713 | 135.99 | radiation | 1 | 270 | < th | dose independent | rect. | 3 | 17 |
| 740 | 136.07 | radiation | 1 | 270 | < th | dose dependent | rect. | 11 | 8 |
| 746 | 136.09 | wind | 1 | 43200 | < th | dose dependent | rect. | 6 | 3 |
| 753 | 136.11 | temperature | 25 | 720 | > th | dose independent | rect. | 11 | 10 |
| 809 | 136.23 | radiation | 20 | 14400 | < th | dose independent | rect. | 23 | 7 |
| 818 | 136.26 | radiation | 1 | 270 | < th | dose independent | rect. | 11 | 8 |
| 845 | 136.30 | humidity | 50 | 90 | > th | dose dependent | rect. | 4 | 16 |
| 852 | 136.31 | radiation | 20 | 4320 | < th | dose independent | rect. | 17 | 12 |
| 865 | 136.34 | radiation | 1 | 270 | < th | dose dependent | rect. | 17 | 1 |
| 877 | 136.35 | temperature | 25 | 270 | < th | dose dependent | rect. | 17 | 1 |
| 882 | 136.37 | wind | 1 | 30 | > th | dose independent | rect. | 4 | 7 |
| 906 | 136.41 | temperature | 25 | 10 | < th | dose independent | rect. | 13 | 13 |
| 931 | 136.47 | wind | 1 | 43200 | < th | dose independent | rect. | 6 | 2 |
| 943 | 136.49 | radiation | 1 | 270 | < th | dose independent | rect. | 17 | 1 |
| 949 | 136.50 | atmosphere | 1005 | 270 | > th | dose independent | rect. | 23 | 2 |