BLASTP 2.2.23 [Feb-03-2010]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Os02g0523800 Os02g0523800|AK072296
         (295 letters)

Database: rap3 
           52,214 sequences; 17,035,801 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Os02g0523800  Inositol polyphosphate kinase family protein        429   e-120

>Os02g0523800 Inositol polyphosphate kinase family protein
          Length = 295

 Score =  429 bits (1103), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 225/295 (76%), Positives = 225/295 (76%)

Query: 1   MASDLRPPEHQVAGHRASADKLGPLVDGEGLFYKPLQAGERGXXXXXXXXXXXXXXXVPP 60
           MASDLRPPEHQVAGHRASADKLGPLVDGEGLFYKPLQAGERG               VPP
Sbjct: 1   MASDLRPPEHQVAGHRASADKLGPLVDGEGLFYKPLQAGERGEHEAAFYAAFTAHPAVPP 60

Query: 61  RVRGAFFPRFHGTRFLXXXXXXXXXXXXHIVLDDLLAGLPSPCVADVKIGACTWPPRSPD 120
           RVRGAFFPRFHGTRFL            HIVLDDLLAGLPSPCVADVKIGACTWPPRSPD
Sbjct: 61  RVRGAFFPRFHGTRFLPAPASPGGAPYPHIVLDDLLAGLPSPCVADVKIGACTWPPRSPD 120

Query: 121 PYVAKCLAKDRETTSALLGFXXXXXXXXXXXXXXXWRPDRSELKGIDAAGVRRVLRRYVS 180
           PYVAKCLAKDRETTSALLGF               WRPDRSELKGIDAAGVRRVLRRYVS
Sbjct: 121 PYVAKCLAKDRETTSALLGFRVSGVRVVDARGGAVWRPDRSELKGIDAAGVRRVLRRYVS 180

Query: 181 TXXXXXXXXXXXXXVYGGEGGVLAQLRELKAWFEEQTLYHFYSASILFGYDXXXXXXXXX 240
           T             VYGGEGGVLAQLRELKAWFEEQTLYHFYSASILFGYD         
Sbjct: 181 TGGGDGLDCALAAAVYGGEGGVLAQLRELKAWFEEQTLYHFYSASILFGYDANAAAAAAP 240

Query: 241 XXXXXXVRVKLVDFAHVDDGDGVIDHNFLGGLCSLIKFIGDIVAEVTEKASSDHS 295
                 VRVKLVDFAHVDDGDGVIDHNFLGGLCSLIKFIGDIVAEVTEKASSDHS
Sbjct: 241 GGGSGGVRVKLVDFAHVDDGDGVIDHNFLGGLCSLIKFIGDIVAEVTEKASSDHS 295



  Database: rap3
    Posted date:  Nov 19, 2010  6:03 PM
  Number of letters in database: 17,035,801
  Number of sequences in database:  52,214
  
Lambda     K      H
   0.323    0.142    0.446 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 8,651,693
Number of extensions: 284298
Number of successful extensions: 478
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 478
Number of HSP's successfully gapped: 1
Length of query: 295
Length of database: 17,035,801
Length adjustment: 100
Effective length of query: 195
Effective length of database: 11,814,401
Effective search space: 2303808195
Effective search space used: 2303808195
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 156 (64.7 bits)