Os02g0513800
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Ovarian tumour, otubain domain containing protein.
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Os02g0513800 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Ovarian tumour, otubain domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 307.25 | 0.824 | 4.1 | -2.46 | 0.314 | -1.82 | -2.11 | 1.02 | -0.192 | 13.3 | 0.05075 | 766 | -- | -- |
| 307.61 | 0.817 | 4.1 | -2.4 | 0.329 | -1.73 | -2.44 | -- | -0.176 | 14.3 | 0.05 | 765 | -- | -- |
| 322.45 | 0.836 | 4.11 | -2.56 | 0.0629 | -1.76 | -- | 2.37 | -0.223 | 12.7 | 0.119 | 682 | -- | -- |
| 328.37 | 0.844 | 4.13 | -2.53 | 0.453 | -2.32 | -- | -- | -0.236 | 9.8 | 0.06501 | 789 | -- | -- |
| 322.6 | 0.837 | 4.11 | -2.54 | -- | -1.78 | -- | 2.33 | -0.214 | -- | 0.09586 | 683 | -- | -- |
| 330.63 | 0.852 | 4.1 | -2.27 | 1.46 | -- | -2.18 | -- | -0.114 | 16.8 | -- | -- | -- | -- |
| 341.41 | 0.865 | 4.11 | -2.28 | 1.47 | -- | -- | -- | -0.125 | 17.2 | -- | -- | -- | -- |
| 332.44 | 0.849 | 4.12 | -2.48 | -- | -1.8 | -- | -- | -0.212 | -- | 0.06 | 688 | -- | -- |
| 474.61 | 1.01 | 4.09 | -- | 0.84 | -0.981 | -- | -- | 0.0223 | 19.8 | 10 | 442 | -- | -- |
| 453.77 | 0.995 | 4.1 | -2.33 | -- | -- | -- | -- | -0.162 | -- | -- | -- | -- | -- |
| 478.59 | 1.02 | 4.06 | -- | 1.51 | -- | -- | -- | 0.129 | 17.2 | -- | -- | -- | -- |
| 483.72 | 1.02 | 4.07 | -- | -- | -1.69 | -- | -- | 0.0114 | -- | 10 | 655 | -- | -- |
| 597.27 | 1.14 | 4.04 | -- | -- | -- | -- | -- | 0.0968 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 298.54 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 11 | 16 |
| 7 | 300.11 | temperature | 25.0 | 720 | > th | dose independent | rect. | 14 | 5 |
| 9 | 300.29 | wind | 1.0 | 10 | > th | dose independent | sin | 15 | NA |
| 18 | 300.82 | wind | 1.0 | 10 | > th | dose independent | rect. | 19 | 14 |
| 21 | 300.96 | temperature | 25.0 | 720 | > th | dose independent | rect. | 10 | 10 |
| 29 | 301.44 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 15 | 15 |
| 35 | 301.63 | wind | 3.0 | 270 | > th | dose independent | rect. | 15 | 6 |
| 65 | 302.72 | temperature | 15.0 | 720 | > th | dose dependent | rect. | 15 | 4 |
| 68 | 302.79 | atmosphere | 1000.0 | 270 | > th | dose dependent | rect. | 15 | 6 |
| 90 | 303.35 | temperature | 25.0 | 270 | > th | dose independent | rect. | 12 | 15 |
| 106 | 303.56 | temperature | 20.0 | 720 | > th | dose dependent | rect. | 11 | 8 |
| 109 | 303.75 | temperature | 30.0 | 270 | < th | dose independent | rect. | 16 | 15 |
| 119 | 303.84 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 20 | 19 |
| 132 | 303.93 | humidity | 90.0 | 14400 | < th | dose independent | rect. | 2 | 1 |
| 140 | 303.99 | temperature | 25.0 | 720 | > th | dose independent | sin | 20 | NA |
| 145 | 304.06 | temperature | 15.0 | 270 | > th | dose dependent | sin | 17 | NA |
| 161 | 304.19 | humidity | 90.0 | 14400 | < th | dose independent | rect. | 1 | 3 |
| 172 | 304.28 | humidity | 90.0 | 270 | < th | dose independent | rect. | 15 | 6 |
| 185 | 304.44 | temperature | 25.0 | 720 | < th | dose independent | rect. | 16 | 4 |
| 193 | 304.53 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 21 | 16 |
| 231 | 304.90 | wind | 1.0 | 270 | > th | dose dependent | rect. | 15 | 6 |
| 246 | 304.99 | temperature | 10.0 | 720 | > th | dose dependent | sin | 20 | NA |
| 255 | 305.06 | radiation | 1.0 | 720 | < th | dose dependent | rect. | 16 | 9 |
| 308 | 305.28 | temperature | 15.0 | 720 | > th | dose dependent | rect. | 8 | 14 |
| 323 | 305.39 | wind | 1.0 | 270 | > th | dose dependent | rect. | 16 | 3 |
| 328 | 305.41 | humidity | 50.0 | 270 | > th | dose independent | rect. | 20 | 18 |
| 359 | 305.62 | humidity | 70.0 | 270 | > th | dose independent | rect. | 16 | 16 |
| 367 | 305.67 | radiation | 1.0 | 720 | > th | dose independent | rect. | 15 | 4 |
| 390 | 305.73 | temperature | 10.0 | 90 | > th | dose dependent | rect. | 21 | 20 |
| 440 | 305.98 | temperature | 10.0 | 10 | > th | dose dependent | rect. | 21 | 19 |
| 450 | 306.03 | atmosphere | 1015.0 | 10 | < th | dose independent | rect. | 21 | 19 |
| 460 | 306.07 | temperature | 30.0 | 270 | < th | dose independent | rect. | 14 | 9 |
| 489 | 306.18 | temperature | 25.0 | 720 | < th | dose independent | rect. | 19 | 1 |
| 507 | 306.24 | atmosphere | 1000.0 | 270 | > th | dose independent | rect. | 23 | 15 |
| 511 | 306.25 | atmosphere | 995.0 | 10 | > th | dose dependent | rect. | 17 | 16 |
| 531 | 306.34 | atmosphere | 995.0 | 90 | > th | dose dependent | rect. | 17 | 16 |
| 548 | 306.43 | wind | 1.0 | 270 | > th | dose independent | rect. | 15 | 16 |
| 565 | 306.50 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 1 | 2 |
| 587 | 306.58 | radiation | 40.0 | 270 | < th | dose independent | rect. | 20 | 18 |
| 592 | 306.60 | humidity | 60.0 | 270 | > th | dose independent | rect. | 7 | 8 |
| 614 | 306.73 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 15 | 5 |
| 615 | 306.73 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 15 | 5 |
| 638 | 306.84 | atmosphere | 1015.0 | 270 | < th | dose dependent | rect. | 15 | 4 |
| 643 | 306.86 | radiation | 1.0 | 720 | < th | dose dependent | rect. | 16 | 5 |
| 649 | 306.87 | temperature | 20.0 | 270 | > th | dose dependent | rect. | 22 | 5 |
| 650 | 306.87 | atmosphere | 995.0 | 270 | > th | dose dependent | rect. | 15 | 16 |
| 652 | 306.88 | radiation | 1.0 | 720 | < th | dose dependent | sin | 16 | NA |
| 697 | 307.00 | radiation | 10.0 | 720 | < th | dose independent | rect. | 20 | 22 |
| 708 | 307.03 | radiation | 40.0 | 270 | < th | dose independent | rect. | 15 | 4 |
| 711 | 307.03 | radiation | 40.0 | 270 | < th | dose independent | rect. | 7 | 8 |
| 722 | 307.06 | temperature | 10.0 | 10 | > th | dose dependent | rect. | 23 | 17 |
| 741 | 307.11 | radiation | 1.0 | 30 | < th | dose dependent | rect. | 4 | 17 |
| 744 | 307.14 | radiation | 1.0 | 720 | < th | dose independent | rect. | 16 | 9 |
| 747 | 307.15 | temperature | 10.0 | 270 | > th | dose independent | rect. | 15 | 5 |
| 748 | 307.15 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 15 | 5 |
| 751 | 307.15 | temperature | 10.0 | 270 | > th | dose independent | rect. | 20 | 19 |
| 782 | 307.23 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 20 | 18 |
| 793 | 307.29 | wind | 9.0 | 270 | < th | dose independent | rect. | 15 | 5 |
| 867 | 307.51 | atmosphere | 1000.0 | 90 | > th | dose independent | rect. | 17 | 16 |
| 890 | 307.59 | humidity | 60.0 | 270 | > th | dose independent | rect. | 15 | 6 |
| 900 | 307.61 | atmosphere | 1000.0 | 270 | > th | dose independent | rect. | 15 | 17 |
| 903 | 307.62 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 24 | 5 |
| 934 | 307.68 | temperature | 30.0 | 720 | < th | dose dependent | rect. | 17 | 4 |
| 969 | 307.79 | wind | 9.0 | 270 | < th | dose independent | rect. | 20 | 18 |
| 973 | 307.80 | radiation | 20.0 | 14400 | < th | dose independent | rect. | 18 | 12 |