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Os02g0508100

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Conserved hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 10.2 (0.037) R2 : 0.376
β1 : -1.57 (0.135) R2dD : 0.195 R2D : 0.00272
β2 : -- (--) R2dC : -- R2C : --
β3 : -1.54 (0.148) R2dE : 0.201 R2E : -0.0361
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.9 (0.0831) R2dN8 : 0.291 R2N8 : 0.00685
σ : 0.682
deviance : 214.43
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C
peak time of C : --
E
wheather : humidity
threshold : 80.86
memory length : 1299
response mode : > th
dose dependency : dose independent
G
type of G : rect.
peak or start time of G : 7.55
open length of G : 9.7

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Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = humidity, response mode = > th, dose dependency = dose independent, type of G = rect.)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
194.17 0.655 10.2 -1.79 0.699 -2.66 -1.56 2.72 -0.91 13.9 80 1314 0.267 15.7
198.84 0.657 10.1 -1.62 0.723 -2.52 -1.22 -- -0.905 13.6 80.37 1296 0.267 16.1
202.01 0.662 10.1 -1.79 0.663 -2.59 -- 2 -0.885 13.1 80.02 1326 0.113 16.3
203.61 0.665 10.1 -1.62 0.754 -2.55 -- -- -0.868 13.1 80.46 1291 0.0333 16.6
216.46 0.685 10.2 -1.86 -- -2.47 -- 3.15 -0.933 -- 80.25 1431 0.8 15.9
259.01 0.754 10.1 -1.31 0.417 -- -1.17 -- -0.617 12.3 -- -- -- --
263.42 0.76 10.1 -1.36 0.451 -- -- -- -0.627 10.8 -- -- -- --
214.43 0.682 10.2 -1.57 -- -1.54 -- -- -0.9 -- 80.86 1299 7.55 9.7
259.85 0.751 10.1 -- 1.13 -2.28 -- -- -0.601 12.4 83.17 1033 0.85 17.9
276.02 0.776 10.1 -1.37 -- -- -- -- -0.629 -- -- -- -- --
312.26 0.827 10 -- 0.462 -- -- -- -0.475 11 -- -- -- --
256.35 0.746 10.1 -- -- -2 -- -- -0.694 -- 84.09 848 9.12 11.2
325.55 0.842 10.1 -- -- -- -- -- -0.477 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 201.66 humidity 70 720 > th dose dependent rect. 9 14
2 202.06 humidity 80 1440 > th dose independent rect. 1 15
4 202.27 humidity 80 1440 < th dose independent rect. 8 7
9 202.43 humidity 80 1440 > th dose independent rect. 5 11
13 202.58 humidity 80 1440 < th dose independent rect. 1 14
20 202.79 humidity 80 1440 < th dose independent rect. 5 10
21 202.81 humidity 80 720 > th dose independent rect. 9 12
59 203.73 humidity 70 720 > th dose dependent sin 20 NA
87 204.52 humidity 80 720 > th dose independent sin 21 NA
89 204.59 humidity 80 1440 > th dose independent rect. 11 3
91 204.71 humidity 80 1440 < th dose independent sin 3 NA
100 204.96 humidity 80 1440 > th dose independent sin 3 NA
128 205.46 humidity 80 1440 < th dose independent rect. 11 3
152 205.95 radiation 10 1440 > th dose independent rect. 11 1
157 206.03 humidity 70 1440 > th dose dependent rect. 11 3
164 206.15 radiation 10 1440 < th dose dependent rect. 9 9
167 206.17 radiation 10 1440 < th dose dependent rect. 9 11
171 206.20 radiation 10 1440 < th dose dependent rect. 9 15
172 206.20 radiation 10 1440 < th dose dependent rect. 9 18
261 207.40 radiation 10 1440 < th dose dependent sin 19 NA
316 208.08 radiation 10 1440 < th dose dependent rect. 13 4
428 209.60 humidity 90 1440 < th dose dependent rect. 1 15
487 210.38 humidity 90 1440 < th dose dependent rect. 9 6
528 210.77 humidity 70 720 > th dose dependent rect. 9 21
537 210.86 humidity 90 1440 < th dose dependent rect. 11 2
625 211.55 humidity 50 1440 > th dose dependent rect. 9 6
667 211.96 humidity 50 1440 > th dose dependent rect. 11 2
677 212.03 humidity 90 1440 < th dose dependent sin 3 NA
690 212.17 humidity 70 720 > th dose dependent rect. 5 21
791 212.73 humidity 70 720 > th dose dependent rect. 1 22
818 212.86 humidity 70 30 > th dose dependent rect. 5 23
847 213.06 humidity 80 720 < th dose independent sin 21 NA
928 213.48 humidity 70 720 > th dose dependent rect. 17 23
949 213.62 humidity 50 1440 > th dose dependent rect. 1 15
956 213.66 humidity 70 720 > th dose dependent no NA NA