BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os02g0508100 Os02g0508100|AK121771
(72 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT3G48660.1 | chr3:18029659-18030133 FORWARD LENGTH=90 104 1e-23
AT5G63500.1 | chr5:25423460-25423669 FORWARD LENGTH=70 103 1e-23
AT3G27027.1 | chr3:9971921-9972130 FORWARD LENGTH=70 92 6e-20
AT5G08391.1 | chr5:2699357-2699566 FORWARD LENGTH=70 91 1e-19
AT3G27030.1 | chr3:9972508-9974225 REVERSE LENGTH=143 87 2e-18
AT5G40980.1 | chr5:16414877-16415086 REVERSE LENGTH=70 84 2e-17
AT3G01950.1 | chr3:324026-324238 FORWARD LENGTH=71 77 2e-15
AT5G14110.1 | chr5:4553964-4554176 REVERSE LENGTH=71 76 3e-15
AT5G40970.1 | chr5:16414081-16414290 FORWARD LENGTH=70 76 4e-15
AT3G01940.1 | chr3:322841-323053 REVERSE LENGTH=71 75 5e-15
AT5G50660.1 | chr5:20612575-20612778 FORWARD LENGTH=68 62 4e-11
AT5G50560.1 | chr5:20579233-20579436 FORWARD LENGTH=68 62 4e-11
AT5G40960.1 | chr5:16412745-16412951 REVERSE LENGTH=69 53 3e-08
>AT3G48660.1 | chr3:18029659-18030133 FORWARD LENGTH=90
Length = 89
Score = 104 bits (259), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 49/69 (71%), Positives = 58/69 (84%)
Query: 4 MADWGPVVIATVLFVLLTPGLLFQLPAHGRIVGFGTMHTSGVAVLVHAVIYFALITIFLI 63
MADWGPVV+A +LFVLLTPGLLFQ+PA GR+V FG M TSG ++LVH +I+F LITIF I
Sbjct: 1 MADWGPVVVAVILFVLLTPGLLFQIPARGRVVEFGNMQTSGASILVHTIIFFGLITIFTI 60
Query: 64 AIGVHIYAG 72
AI +HIY G
Sbjct: 61 AIRLHIYTG 69
>AT5G63500.1 | chr5:25423460-25423669 FORWARD LENGTH=70
Length = 69
Score = 103 bits (258), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 49/69 (71%), Positives = 60/69 (86%)
Query: 4 MADWGPVVIATVLFVLLTPGLLFQLPAHGRIVGFGTMHTSGVAVLVHAVIYFALITIFLI 63
MADWGPV+IA +LFV+L+PGLLFQ+PA GR+V FG M TSG ++LVHA+I+F LITIF I
Sbjct: 1 MADWGPVLIAVILFVVLSPGLLFQIPAGGRVVEFGNMQTSGASILVHAIIFFGLITIFTI 60
Query: 64 AIGVHIYAG 72
AI VHIY+G
Sbjct: 61 AINVHIYSG 69
>AT3G27027.1 | chr3:9971921-9972130 FORWARD LENGTH=70
Length = 69
Score = 92.0 bits (227), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 42/66 (63%), Positives = 54/66 (81%)
Query: 5 ADWGPVVIATVLFVLLTPGLLFQLPAHGRIVGFGTMHTSGVAVLVHAVIYFALITIFLIA 64
DWGPV++A LF+LL+PGLLFQLPA R+V FG M TSG+A+LVHA IYF ++TI +IA
Sbjct: 3 TDWGPVIVAVSLFILLSPGLLFQLPARTRVVEFGNMTTSGIAILVHAFIYFCILTILVIA 62
Query: 65 IGVHIY 70
I +HI+
Sbjct: 63 IQIHIH 68
>AT5G08391.1 | chr5:2699357-2699566 FORWARD LENGTH=70
Length = 69
Score = 91.3 bits (225), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 38/69 (55%), Positives = 55/69 (79%)
Query: 4 MADWGPVVIATVLFVLLTPGLLFQLPAHGRIVGFGTMHTSGVAVLVHAVIYFALITIFLI 63
M+DWGPV++ +LFV+LTPGLLFQLP + V FG TS V+V+VH+++YF+L+ +FL+
Sbjct: 1 MSDWGPVLVTVILFVMLTPGLLFQLPGRQKYVEFGNFQTSAVSVIVHSLLYFSLVCVFLL 60
Query: 64 AIGVHIYAG 72
A+ +HIY G
Sbjct: 61 ALKIHIYIG 69
>AT3G27030.1 | chr3:9972508-9974225 REVERSE LENGTH=143
Length = 142
Score = 86.7 bits (213), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 40/66 (60%), Positives = 51/66 (77%)
Query: 4 MADWGPVVIATVLFVLLTPGLLFQLPAHGRIVGFGTMHTSGVAVLVHAVIYFALITIFLI 63
M DWGPV +A LFVLLTPGLL Q+P GR+V FGT TSG++V+VH +IYF L+ I L+
Sbjct: 1 MPDWGPVFVAVTLFVLLTPGLLIQVPGRGRVVEFGTFQTSGLSVIVHTLIYFTLVCILLL 60
Query: 64 AIGVHI 69
A+ +HI
Sbjct: 61 ALQIHI 66
Score = 83.2 bits (204), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 37/72 (51%), Positives = 53/72 (73%)
Query: 1 GEAMADWGPVVIATVLFVLLTPGLLFQLPAHGRIVGFGTMHTSGVAVLVHAVIYFALITI 60
+MADW PV++ VLFV+L+PGLLF LP + R V FG + T+G A+ VH +I+FA+ TI
Sbjct: 71 STSMADWAPVLVGVVLFVILSPGLLFSLPGNNRTVDFGGLKTNGKAIAVHTLIFFAIYTI 130
Query: 61 FLIAIGVHIYAG 72
++A+ +HIY G
Sbjct: 131 LILALNLHIYTG 142
>AT5G40980.1 | chr5:16414877-16415086 REVERSE LENGTH=70
Length = 69
Score = 83.6 bits (205), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 35/55 (63%), Positives = 47/55 (85%)
Query: 5 ADWGPVVIATVLFVLLTPGLLFQLPAHGRIVGFGTMHTSGVAVLVHAVIYFALIT 59
ADWGPV++A LF+LL+PGLLFQLPA R++ FG M TSG+++LVHA+IYF ++T
Sbjct: 3 ADWGPVIVAVALFILLSPGLLFQLPARTRVMEFGNMSTSGISILVHAIIYFCILT 57
>AT3G01950.1 | chr3:324026-324238 FORWARD LENGTH=71
Length = 70
Score = 76.6 bits (187), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 33/66 (50%), Positives = 51/66 (77%)
Query: 6 DWGPVVIATVLFVLLTPGLLFQLPAHGRIVGFGTMHTSGVAVLVHAVIYFALITIFLIAI 65
DWGPV+++ + F++L+PG+LFQLP + V FG TSG ++++H +++FA ITI LIA+
Sbjct: 4 DWGPVLMSVIFFIVLSPGVLFQLPGKSKAVEFGGFQTSGPSIVIHTLLFFAFITISLIAL 63
Query: 66 GVHIYA 71
+HIYA
Sbjct: 64 HIHIYA 69
>AT5G14110.1 | chr5:4553964-4554176 REVERSE LENGTH=71
Length = 70
Score = 76.3 bits (186), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 33/65 (50%), Positives = 51/65 (78%)
Query: 6 DWGPVVIATVLFVLLTPGLLFQLPAHGRIVGFGTMHTSGVAVLVHAVIYFALITIFLIAI 65
+WGPV+++ LF++LTPG+LFQLP ++V FG TSG A+++H +I+FA IT+ +IA+
Sbjct: 4 NWGPVLMSVFLFIVLTPGVLFQLPGKTKVVEFGGFQTSGAAIVIHTLIFFACITVSIIAL 63
Query: 66 GVHIY 70
+HIY
Sbjct: 64 HIHIY 68
>AT5G40970.1 | chr5:16414081-16414290 FORWARD LENGTH=70
Length = 69
Score = 75.9 bits (185), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 36/69 (52%), Positives = 49/69 (71%)
Query: 4 MADWGPVVIATVLFVLLTPGLLFQLPAHGRIVGFGTMHTSGVAVLVHAVIYFALITIFLI 63
MADW PV++ VLFV+L+PGLLF LP H + FG M T+G A+ VH +I+FA TI ++
Sbjct: 1 MADWAPVLVGVVLFVILSPGLLFSLPGHHHTLQFGGMKTNGKAIAVHTLIFFAAYTILIL 60
Query: 64 AIGVHIYAG 72
A+ +HI G
Sbjct: 61 AVNLHITTG 69
>AT3G01940.1 | chr3:322841-323053 REVERSE LENGTH=71
Length = 70
Score = 75.5 bits (184), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 41/66 (62%), Positives = 56/66 (84%)
Query: 5 ADWGPVVIATVLFVLLTPGLLFQLPAHGRIVGFGTMHTSGVAVLVHAVIYFALITIFLIA 64
ADWGPV +A VLFV+L+PGLLFQLPA R++ G M TSG+++LVHA+++FA+ITI +IA
Sbjct: 4 ADWGPVAVAVVLFVVLSPGLLFQLPARRRVLECGNMTTSGISILVHAILFFAIITILVIA 63
Query: 65 IGVHIY 70
I +HI+
Sbjct: 64 IQIHIH 69
>AT5G50660.1 | chr5:20612575-20612778 FORWARD LENGTH=68
Length = 67
Score = 62.4 bits (150), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 35/62 (56%), Positives = 48/62 (77%)
Query: 4 MADWGPVVIATVLFVLLTPGLLFQLPAHGRIVGFGTMHTSGVAVLVHAVIYFALITIFLI 63
M +W PVV+ATVLFV+L+PGLLFQ+P + V FG M TSG ++L+HA +YF L+T+F +
Sbjct: 1 MTEWLPVVVATVLFVVLSPGLLFQVPGNNNFVDFGKMETSGYSILLHAFLYFGLVTVFTV 60
Query: 64 AI 65
I
Sbjct: 61 VI 62
>AT5G50560.1 | chr5:20579233-20579436 FORWARD LENGTH=68
Length = 67
Score = 62.4 bits (150), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 35/62 (56%), Positives = 48/62 (77%)
Query: 4 MADWGPVVIATVLFVLLTPGLLFQLPAHGRIVGFGTMHTSGVAVLVHAVIYFALITIFLI 63
M +W PVV+ATVLFV+L+PGLLFQ+P + V FG M TSG ++L+HA +YF L+T+F +
Sbjct: 1 MTEWLPVVVATVLFVVLSPGLLFQVPGNNNFVDFGKMETSGYSILLHAFLYFGLVTVFTV 60
Query: 64 AI 65
I
Sbjct: 61 VI 62
>AT5G40960.1 | chr5:16412745-16412951 REVERSE LENGTH=69
Length = 68
Score = 53.1 bits (126), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 28/68 (41%), Positives = 41/68 (60%)
Query: 4 MADWGPVVIATVLFVLLTPGLLFQLPAHGRIVGFGTMHTSGVAVLVHAVIYFALITIFLI 63
M DW +IA+ LF L+PGL+ Q P VGF M T+ ++ VH V+Y + +FL+
Sbjct: 1 MHDWAAPLIASALFAFLSPGLILQFPGKESPVGFMNMKTTVASIFVHTVLYGLFLILFLV 60
Query: 64 AIGVHIYA 71
+ VH+YA
Sbjct: 61 VLNVHVYA 68
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.333 0.149 0.464
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 1,341,869
Number of extensions: 41586
Number of successful extensions: 119
Number of sequences better than 1.0e-05: 13
Number of HSP's gapped: 119
Number of HSP's successfully gapped: 14
Length of query: 72
Length of database: 11,106,569
Length adjustment: 44
Effective length of query: 28
Effective length of database: 9,900,265
Effective search space: 277207420
Effective search space used: 277207420
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (22.0 bits)
S2: 104 (44.7 bits)