Os02g0507600
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os02g0507600 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 170.14 | 0.613 | 9.31 | 0.197 | 1.34 | 0.936 | -0.977 | -2.47 | -0.461 | 6.98 | 12.72 | 1344 | -- | -- |
| 180.28 | 0.625 | 9.29 | 0.476 | 1.34 | 0.935 | -0.861 | -- | -0.406 | 6.96 | 11.87 | 1362 | -- | -- |
| 172.58 | 0.612 | 9.31 | 0.189 | 1.34 | 0.944 | -- | -2.36 | -0.46 | 7.01 | 12.81 | 1344 | -- | -- |
| 179.08 | 0.623 | 9.3 | 0.595 | 1.42 | 0.831 | -- | -- | -0.332 | 6.77 | 2.59 | 1391 | -- | -- |
| 261.56 | 0.753 | 9.31 | 0.275 | -- | 0.835 | -- | -2.06 | -0.364 | -- | 13.38 | 1425 | -- | -- |
| 202.37 | 0.667 | 9.2 | 0.749 | 1.29 | -- | -0.879 | -- | -0.0835 | 6.57 | -- | -- | -- | -- |
| 204.3 | 0.669 | 9.2 | 0.736 | 1.29 | -- | -- | -- | -0.0807 | 6.61 | -- | -- | -- | -- |
| 256.46 | 0.746 | 9.28 | 0.623 | -- | 1.25 | -- | -- | -0.29 | -- | 2.578 | 1457 | -- | -- |
| 182.54 | 0.629 | 9.3 | -- | 1.45 | 1.48 | -- | -- | -0.36 | 7.29 | 2.041 | 1373 | -- | -- |
| 290.87 | 0.797 | 9.23 | 0.767 | -- | -- | -- | -- | -0.0545 | -- | -- | -- | -- | -- |
| 218.6 | 0.692 | 9.22 | -- | 1.3 | -- | -- | -- | -0.163 | 6.58 | -- | -- | -- | -- |
| 263.46 | 0.756 | 9.29 | -- | -- | 1.54 | -- | -- | -0.373 | -- | 2.118 | 1469 | -- | -- |
| 306.4 | 0.817 | 9.25 | -- | -- | -- | -- | -- | -0.14 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 164.03 | radiation | 10.0 | 1440 | < th | dose dependent | rect. | 9 | 5 |
| 2 | 164.46 | radiation | 10.0 | 1440 | < th | dose dependent | rect. | 9 | 8 |
| 6 | 165.17 | radiation | 20.0 | 1440 | < th | dose dependent | rect. | 11 | 2 |
| 7 | 165.18 | radiation | 10.0 | 1440 | > th | dose independent | rect. | 10 | 3 |
| 12 | 166.50 | radiation | 10.0 | 1440 | > th | dose independent | rect. | 8 | 5 |
| 31 | 167.74 | radiation | 10.0 | 1440 | < th | dose dependent | rect. | 9 | 19 |
| 48 | 168.02 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 11 | 1 |
| 49 | 168.02 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 11 | 1 |
| 64 | 168.76 | radiation | 10.0 | 1440 | < th | dose dependent | sin | 22 | NA |
| 85 | 169.10 | precipitation | 0.1 | 270 | > th | dose independent | rect. | 2 | 2 |
| 103 | 169.27 | precipitation | 0.1 | 270 | > th | dose dependent | rect. | 2 | 2 |
| 105 | 169.36 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 8 | 8 |
| 110 | 169.48 | radiation | 10.0 | 1440 | < th | dose dependent | rect. | 13 | 1 |
| 120 | 169.70 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 11 | 6 |
| 175 | 170.52 | radiation | 20.0 | 1440 | < th | dose independent | rect. | 11 | 2 |
| 218 | 170.82 | radiation | 10.0 | 1440 | > th | dose independent | sin | 4 | NA |
| 243 | 170.94 | humidity | 90.0 | 720 | > th | dose dependent | rect. | 20 | 1 |
| 296 | 171.60 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 15 | 1 |
| 325 | 171.99 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 9 | 3 |
| 367 | 172.27 | humidity | 90.0 | 720 | > th | dose dependent | rect. | 20 | 3 |
| 373 | 172.36 | radiation | 20.0 | 1440 | < th | dose dependent | rect. | 2 | 15 |
| 386 | 172.44 | radiation | 20.0 | 1440 | < th | dose dependent | rect. | 11 | 23 |
| 555 | 173.17 | radiation | 20.0 | 1440 | < th | dose dependent | no | NA | NA |
| 631 | 173.51 | radiation | 20.0 | 1440 | < th | dose independent | rect. | 11 | 22 |
| 656 | 173.60 | radiation | 20.0 | 1440 | < th | dose independent | rect. | 11 | 5 |
| 677 | 173.66 | radiation | 10.0 | 1440 | > th | dose independent | rect. | 11 | 23 |
| 680 | 173.68 | radiation | 20.0 | 1440 | < th | dose dependent | rect. | 15 | 23 |
| 681 | 173.69 | radiation | 10.0 | 1440 | > th | dose independent | no | NA | NA |
| 752 | 173.74 | wind | 1.0 | 14400 | < th | dose dependent | rect. | 2 | 1 |
| 809 | 173.96 | radiation | 20.0 | 1440 | < th | dose independent | rect. | 11 | 8 |
| 819 | 174.00 | radiation | 20.0 | 1440 | < th | dose independent | rect. | 11 | 19 |
| 840 | 174.03 | wind | 1.0 | 14400 | < th | dose independent | rect. | 2 | 1 |
| 872 | 174.16 | radiation | 10.0 | 1440 | < th | dose independent | rect. | 13 | 1 |
| 904 | 174.28 | atmosphere | 995.0 | 43200 | > th | dose independent | rect. | 14 | 3 |
| 927 | 174.31 | atmosphere | 995.0 | 43200 | > th | dose independent | rect. | 15 | 1 |
| 965 | 174.35 | atmosphere | 995.0 | 43200 | < th | dose independent | rect. | 14 | 4 |