Os02g0480900
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Like-Sm ribonucleoprotein-related, core domain containing protein.
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Os02g0480900 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Like-Sm ribonucleoprotein-related, core domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 11.1 | 0.157 | 11.8 | 0.349 | 0.324 | 0.233 | -0.162 | 0.2 | 0.302 | 4.98 | 56 | 8 | -- | -- |
| 11.16 | 0.157 | 11.8 | 0.354 | 0.326 | 0.236 | -0.0691 | -- | 0.303 | 4.99 | 56 | 8 | -- | -- |
| 11.12 | 0.156 | 11.8 | 0.351 | 0.329 | 0.224 | -- | 0.138 | 0.302 | 4.9 | 56 | 8 | -- | -- |
| 11.17 | 0.157 | 11.8 | 0.354 | 0.329 | 0.229 | -- | -- | 0.303 | 4.91 | 56 | 6 | -- | -- |
| 13.89 | 0.174 | 11.8 | 0.404 | -- | 0.47 | -- | 0.0861 | 0.323 | -- | 59.6 | 192 | -- | -- |
| 12.11 | 0.163 | 11.8 | 0.355 | 0.458 | -- | 0.0799 | -- | 0.295 | 4.1 | -- | -- | -- | -- |
| 12.12 | 0.163 | 11.8 | 0.354 | 0.459 | -- | -- | -- | 0.294 | 4.13 | -- | -- | -- | -- |
| 13.75 | 0.173 | 11.8 | 0.332 | -- | 0.411 | -- | -- | 0.335 | -- | 66.57 | 202 | -- | -- |
| 14.48 | 0.178 | 11.8 | -- | 0.336 | 0.229 | -- | -- | 0.263 | 4.88 | 56 | 6 | -- | -- |
| 23.56 | 0.227 | 11.8 | 0.373 | -- | -- | -- | -- | 0.307 | -- | -- | -- | -- | -- |
| 15.43 | 0.184 | 11.8 | -- | 0.466 | -- | -- | -- | 0.255 | 4.11 | -- | -- | -- | -- |
| 16.8 | 0.191 | 11.8 | -- | -- | 0.439 | -- | -- | 0.3 | -- | 71.65 | 215 | -- | -- |
| 27.23 | 0.244 | 11.8 | -- | -- | -- | -- | -- | 0.265 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 10.45 | temperature | 15.0 | 10 | > th | dose dependent | rect. | 6 | 12 |
| 7 | 10.57 | temperature | 25.0 | 30 | > th | dose independent | rect. | 6 | 12 |
| 8 | 10.57 | temperature | 25.0 | 30 | > th | dose independent | rect. | 24 | 18 |
| 12 | 10.71 | humidity | 60.0 | 30 | > th | dose dependent | rect. | 7 | 23 |
| 17 | 10.75 | humidity | 90.0 | 30 | < th | dose independent | rect. | 24 | 18 |
| 31 | 10.83 | temperature | 20.0 | 10 | > th | dose dependent | rect. | 8 | 10 |
| 33 | 10.84 | radiation | 10.0 | 720 | < th | dose independent | rect. | 14 | 14 |
| 38 | 10.86 | humidity | 90.0 | 30 | < th | dose independent | rect. | 6 | 12 |
| 39 | 10.86 | humidity | 90.0 | 720 | < th | dose dependent | rect. | 13 | 3 |
| 42 | 10.88 | radiation | 20.0 | 1440 | > th | dose independent | rect. | 11 | 2 |
| 43 | 10.88 | humidity | 90.0 | 30 | < th | dose independent | rect. | 3 | 15 |
| 46 | 10.88 | temperature | 15.0 | 30 | > th | dose dependent | sin | 1 | NA |
| 58 | 10.89 | temperature | 20.0 | 10 | > th | dose dependent | rect. | 24 | 18 |
| 59 | 10.89 | radiation | 10.0 | 720 | < th | dose dependent | rect. | 10 | 18 |
| 66 | 10.91 | temperature | 25.0 | 30 | < th | dose independent | rect. | 3 | 11 |
| 69 | 10.91 | atmosphere | 995.0 | 30 | > th | dose dependent | rect. | 9 | 14 |
| 75 | 10.92 | temperature | 25.0 | 30 | > th | dose independent | rect. | 6 | 10 |
| 77 | 10.92 | temperature | 25.0 | 90 | < th | dose independent | rect. | 1 | 14 |
| 85 | 10.93 | temperature | 25.0 | 30 | > th | dose independent | rect. | 8 | 10 |
| 95 | 10.93 | radiation | 10.0 | 720 | < th | dose dependent | rect. | 13 | 15 |
| 97 | 10.94 | atmosphere | 1000.0 | 720 | > th | dose independent | rect. | 7 | 6 |
| 106 | 10.94 | humidity | 90.0 | 720 | < th | dose dependent | rect. | 15 | 1 |
| 112 | 10.94 | temperature | 30.0 | 30 | < th | dose dependent | rect. | 3 | 16 |
| 114 | 10.94 | humidity | 60.0 | 10 | > th | dose dependent | rect. | 1 | 23 |
| 117 | 10.95 | atmosphere | 1005.0 | 30 | > th | dose independent | rect. | 10 | 13 |
| 119 | 10.95 | radiation | 10.0 | 720 | < th | dose independent | rect. | 11 | 17 |
| 131 | 10.96 | temperature | 25.0 | 30 | > th | dose independent | sin | 1 | NA |
| 133 | 10.96 | temperature | 25.0 | 30 | < th | dose independent | rect. | 3 | 9 |
| 142 | 10.96 | temperature | 30.0 | 30 | < th | dose dependent | rect. | 3 | 12 |
| 153 | 10.97 | atmosphere | 995.0 | 720 | > th | dose dependent | rect. | 7 | 5 |
| 159 | 10.97 | radiation | 10.0 | 720 | < th | dose dependent | rect. | 14 | 13 |
| 165 | 10.98 | humidity | 90.0 | 90 | < th | dose independent | rect. | 23 | 22 |
| 166 | 10.98 | humidity | 90.0 | 30 | < th | dose independent | rect. | 19 | 23 |
| 195 | 10.99 | temperature | 30.0 | 90 | < th | dose dependent | rect. | 1 | 14 |
| 198 | 10.99 | temperature | 30.0 | 90 | < th | dose dependent | rect. | 1 | 18 |
| 199 | 10.99 | temperature | 30.0 | 30 | < th | dose dependent | rect. | 3 | 20 |
| 204 | 11.00 | radiation | 1.0 | 30 | > th | dose independent | rect. | 6 | 12 |
| 207 | 11.00 | temperature | 25.0 | 30 | > th | dose independent | rect. | 19 | 23 |
| 209 | 11.00 | radiation | 10.0 | 720 | < th | dose dependent | rect. | 16 | 3 |
| 213 | 11.00 | temperature | 30.0 | 90 | < th | dose dependent | rect. | 1 | 12 |
| 216 | 11.00 | temperature | 30.0 | 30 | < th | dose dependent | rect. | 1 | 22 |
| 217 | 11.00 | humidity | 60.0 | 90 | > th | dose dependent | rect. | 1 | 22 |
| 218 | 11.00 | humidity | 60.0 | 10 | > th | dose dependent | rect. | 10 | 22 |
| 220 | 11.00 | radiation | 40.0 | 30 | < th | dose dependent | rect. | 7 | 23 |
| 230 | 11.01 | temperature | 30.0 | 30 | < th | dose dependent | sin | 1 | NA |
| 236 | 11.01 | humidity | 60.0 | 10 | > th | dose dependent | rect. | 16 | 21 |
| 248 | 11.02 | humidity | 90.0 | 90 | > th | dose independent | rect. | 24 | 22 |
| 257 | 11.02 | atmosphere | 1015.0 | 90 | < th | dose dependent | rect. | 8 | 9 |
| 258 | 11.02 | atmosphere | 995.0 | 270 | > th | dose dependent | rect. | 9 | 11 |
| 260 | 11.02 | atmosphere | 995.0 | 270 | > th | dose dependent | rect. | 7 | 12 |
| 271 | 11.03 | temperature | 25.0 | 30 | < th | dose independent | sin | 3 | NA |
| 273 | 11.03 | radiation | 10.0 | 720 | < th | dose independent | rect. | 15 | 4 |
| 285 | 11.03 | precipitation | 0.1 | 720 | < th | dose independent | rect. | 13 | 18 |
| 290 | 11.03 | radiation | 10.0 | 720 | < th | dose dependent | sin | 16 | NA |
| 295 | 11.03 | atmosphere | 1015.0 | 10 | < th | dose dependent | rect. | 8 | 10 |
| 305 | 11.03 | precipitation | 0.1 | 720 | < th | dose dependent | rect. | 13 | 18 |
| 306 | 11.03 | humidity | 70.0 | 30 | > th | dose dependent | rect. | 11 | 19 |
| 316 | 11.04 | humidity | 60.0 | 720 | > th | dose independent | rect. | 24 | 13 |
| 336 | 11.04 | temperature | 20.0 | 10 | > th | dose dependent | rect. | 2 | 16 |
| 341 | 11.04 | humidity | 60.0 | 10 | > th | dose dependent | rect. | 14 | 23 |
| 364 | 11.05 | humidity | 90.0 | 30 | < th | dose independent | rect. | 8 | 23 |
| 412 | 11.06 | temperature | 20.0 | 10 | > th | dose dependent | rect. | 6 | 15 |
| 417 | 11.06 | radiation | 10.0 | 720 | < th | dose dependent | rect. | 24 | 19 |
| 430 | 11.07 | atmosphere | 1005.0 | 720 | > th | dose independent | rect. | 11 | 1 |
| 438 | 11.07 | temperature | 25.0 | 30 | < th | dose independent | rect. | 3 | 19 |
| 468 | 11.07 | radiation | 10.0 | 30 | < th | dose dependent | rect. | 1 | 23 |
| 552 | 11.09 | humidity | 90.0 | 90 | > th | dose independent | rect. | 24 | 18 |
| 556 | 11.09 | radiation | 1.0 | 720 | < th | dose independent | rect. | 24 | 19 |
| 561 | 11.09 | atmosphere | 1000.0 | 720 | > th | dose dependent | rect. | 9 | 3 |
| 576 | 11.09 | radiation | 40.0 | 720 | < th | dose dependent | rect. | 15 | 13 |
| 615 | 11.10 | temperature | 25.0 | 30 | > th | dose independent | rect. | 23 | 22 |
| 619 | 11.10 | radiation | 20.0 | 1440 | < th | dose dependent | rect. | 10 | 4 |
| 625 | 11.10 | atmosphere | 1015.0 | 270 | < th | dose dependent | rect. | 6 | 9 |
| 637 | 11.10 | humidity | 50.0 | 10 | > th | dose dependent | rect. | 10 | 13 |
| 644 | 11.10 | radiation | 20.0 | 30 | < th | dose dependent | rect. | 11 | 19 |
| 653 | 11.10 | humidity | 90.0 | 30 | < th | dose dependent | rect. | 19 | 23 |
| 656 | 11.11 | radiation | 20.0 | 1440 | < th | dose independent | rect. | 11 | 3 |
| 658 | 11.11 | atmosphere | 1005.0 | 90 | > th | dose independent | rect. | 9 | 10 |
| 665 | 11.11 | radiation | 1.0 | 720 | > th | dose independent | rect. | 13 | 18 |
| 671 | 11.11 | humidity | 60.0 | 720 | > th | dose independent | rect. | 16 | 21 |
| 691 | 11.11 | humidity | 50.0 | 720 | > th | dose dependent | rect. | 24 | 19 |
| 693 | 11.11 | humidity | 70.0 | 30 | > th | dose dependent | rect. | 3 | 20 |
| 705 | 11.12 | radiation | 10.0 | 720 | < th | dose independent | sin | 15 | NA |
| 707 | 11.12 | humidity | 80.0 | 720 | < th | dose independent | rect. | 13 | 3 |
| 710 | 11.12 | radiation | 10.0 | 720 | > th | dose independent | rect. | 13 | 3 |
| 735 | 11.12 | atmosphere | 1000.0 | 30 | > th | dose dependent | rect. | 23 | 10 |
| 745 | 11.12 | humidity | 50.0 | 30 | > th | dose dependent | rect. | 16 | 14 |
| 750 | 11.12 | atmosphere | 995.0 | 30 | > th | dose dependent | rect. | 7 | 16 |
| 759 | 11.12 | atmosphere | 995.0 | 30 | > th | dose dependent | rect. | 3 | 20 |
| 778 | 11.13 | temperature | 25.0 | 30 | > th | dose independent | rect. | 24 | 14 |
| 807 | 11.13 | radiation | 20.0 | 1440 | < th | dose dependent | rect. | 11 | 1 |
| 882 | 11.14 | humidity | 60.0 | 10 | > th | dose dependent | no | NA | NA |
| 890 | 11.14 | radiation | 10.0 | 720 | < th | dose dependent | rect. | 10 | 9 |
| 899 | 11.14 | atmosphere | 1010.0 | 30 | < th | dose dependent | rect. | 9 | 16 |
| 920 | 11.15 | radiation | 10.0 | 720 | < th | dose independent | rect. | 14 | 7 |
| 921 | 11.15 | humidity | 90.0 | 90 | < th | dose independent | rect. | 23 | 8 |
| 932 | 11.15 | atmosphere | 995.0 | 720 | > th | dose independent | rect. | 1 | 18 |
| 966 | 11.15 | humidity | 50.0 | 90 | > th | dose dependent | rect. | 1 | 12 |
| 972 | 11.15 | humidity | 60.0 | 10 | > th | dose dependent | rect. | 16 | 16 |
| 979 | 11.15 | humidity | 90.0 | 10 | < th | dose dependent | rect. | 23 | 19 |
| 996 | 11.16 | humidity | 90.0 | 90 | < th | dose independent | sin | 1 | NA |