Os02g0479300
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : MazG nucleotide pyrophosphohydrolase domain containing protein.
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Os02g0479300 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : MazG nucleotide pyrophosphohydrolase domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 111.85 | 0.497 | 7.31 | -0.727 | 1.23 | -1.05 | -1.87 | -0.385 | -0.262 | 0.618 | 19.26 | 312 | -- | -- |
| 112.16 | 0.493 | 7.32 | -0.758 | 1.23 | -0.965 | -1.9 | -- | -0.267 | 0.616 | 19.22 | 311 | -- | -- |
| 126.3 | 0.523 | 7.3 | -0.685 | 1.25 | -1.03 | -- | -0.687 | -0.273 | 0.548 | 19.3 | 261 | -- | -- |
| 127.54 | 0.526 | 7.31 | -0.665 | 1.22 | -0.895 | -- | -- | -0.257 | 0.598 | 19.26 | 317 | -- | -- |
| 200.55 | 0.66 | 7.31 | -0.836 | -- | -1.09 | -- | 0.323 | -0.333 | -- | 19.8 | 857 | -- | -- |
| 131.29 | 0.537 | 7.29 | -0.436 | 1.16 | -- | -1.73 | -- | -0.128 | 0.354 | -- | -- | -- | -- |
| 144.14 | 0.562 | 7.28 | -0.369 | 1.17 | -- | -- | -- | -0.12 | 0.348 | -- | -- | -- | -- |
| 200.94 | 0.66 | 7.31 | -0.718 | -- | -1.01 | -- | -- | -0.324 | -- | 20.49 | 851 | -- | -- |
| 136.44 | 0.544 | 7.29 | -- | 1.31 | -0.558 | -- | -- | -0.164 | 0.495 | 20.3 | 150 | -- | -- |
| 230.1 | 0.709 | 7.26 | -0.33 | -- | -- | -- | -- | -0.101 | -- | -- | -- | -- | -- |
| 147.73 | 0.569 | 7.27 | -- | 1.16 | -- | -- | -- | -0.0786 | 0.331 | -- | -- | -- | -- |
| 200.41 | 0.659 | 7.32 | -- | -- | -0.878 | -- | -- | -0.352 | -- | 25.07 | 904 | -- | -- |
| 232.97 | 0.712 | 7.25 | -- | -- | -- | -- | -- | -0.0645 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 105.25 | wind | 7.0 | 4320 | > th | dose independent | rect. | 17 | 4 |
| 2 | 105.39 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 17 | 1 |
| 3 | 105.47 | wind | 7.0 | 4320 | > th | dose dependent | rect. | 17 | 4 |
| 5 | 105.52 | wind | 7.0 | 4320 | < th | dose independent | rect. | 17 | 4 |
| 7 | 105.72 | wind | 7.0 | 4320 | > th | dose dependent | rect. | 16 | 6 |
| 14 | 105.90 | wind | 7.0 | 4320 | > th | dose dependent | rect. | 16 | 10 |
| 15 | 105.94 | temperature | 20.0 | 720 | < th | dose independent | rect. | 17 | 8 |
| 25 | 106.30 | temperature | 20.0 | 720 | > th | dose independent | rect. | 15 | 7 |
| 28 | 106.37 | wind | 7.0 | 4320 | > th | dose independent | rect. | 17 | 9 |
| 30 | 106.40 | wind | 7.0 | 4320 | < th | dose independent | rect. | 17 | 9 |
| 34 | 106.48 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 17 | 1 |
| 35 | 106.48 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 17 | 1 |
| 38 | 106.50 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 17 | 1 |
| 62 | 106.94 | temperature | 20.0 | 720 | < th | dose dependent | rect. | 16 | 6 |
| 76 | 107.15 | temperature | 20.0 | 720 | < th | dose dependent | rect. | 8 | 14 |
| 78 | 107.16 | temperature | 20.0 | 720 | < th | dose independent | rect. | 12 | 13 |
| 88 | 107.29 | temperature | 20.0 | 720 | < th | dose dependent | rect. | 11 | 11 |
| 196 | 108.40 | temperature | 20.0 | 720 | < th | dose independent | sin | 17 | NA |
| 204 | 108.44 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 15 | 3 |
| 205 | 108.45 | temperature | 20.0 | 270 | > th | dose independent | rect. | 16 | 14 |
| 217 | 108.54 | atmosphere | 1000.0 | 14400 | > th | dose independent | rect. | 11 | 3 |
| 219 | 108.56 | atmosphere | 1000.0 | 14400 | < th | dose independent | rect. | 11 | 3 |
| 233 | 108.64 | temperature | 20.0 | 720 | > th | dose independent | sin | 17 | NA |
| 234 | 108.64 | atmosphere | 1000.0 | 14400 | > th | dose independent | rect. | 11 | 1 |
| 257 | 108.70 | atmosphere | 1000.0 | 14400 | < th | dose dependent | rect. | 11 | 2 |
| 259 | 108.71 | atmosphere | 1000.0 | 14400 | > th | dose independent | rect. | 7 | 7 |
| 261 | 108.71 | atmosphere | 1000.0 | 14400 | < th | dose independent | rect. | 7 | 8 |
| 269 | 108.72 | atmosphere | 1000.0 | 14400 | < th | dose independent | rect. | 4 | 11 |
| 275 | 108.74 | atmosphere | 1000.0 | 14400 | > th | dose independent | rect. | 4 | 11 |
| 291 | 108.77 | radiation | 1.0 | 14400 | < th | dose dependent | rect. | 23 | 5 |
| 292 | 108.78 | atmosphere | 1000.0 | 14400 | < th | dose dependent | rect. | 11 | 4 |
| 300 | 108.82 | atmosphere | 1000.0 | 14400 | < th | dose independent | rect. | 4 | 1 |
| 314 | 108.86 | temperature | 20.0 | 720 | > th | dose independent | rect. | 17 | 10 |
| 315 | 108.86 | atmosphere | 1000.0 | 14400 | < th | dose dependent | rect. | 14 | 1 |
| 345 | 108.95 | atmosphere | 1000.0 | 14400 | < th | dose dependent | rect. | 7 | 8 |
| 378 | 109.02 | atmosphere | 1000.0 | 14400 | > th | dose independent | rect. | 7 | 1 |
| 387 | 109.03 | atmosphere | 1000.0 | 14400 | < th | dose independent | rect. | 4 | 4 |
| 397 | 109.05 | atmosphere | 1000.0 | 14400 | < th | dose independent | rect. | 7 | 1 |
| 411 | 109.06 | atmosphere | 1000.0 | 14400 | < th | dose dependent | rect. | 7 | 1 |
| 412 | 109.07 | atmosphere | 1000.0 | 14400 | > th | dose independent | rect. | 4 | 4 |
| 479 | 109.17 | atmosphere | 1000.0 | 14400 | > th | dose independent | rect. | 4 | 1 |
| 541 | 109.26 | atmosphere | 995.0 | 14400 | < th | dose independent | rect. | 18 | 1 |
| 548 | 109.26 | atmosphere | 995.0 | 14400 | < th | dose dependent | rect. | 18 | 1 |
| 558 | 109.28 | atmosphere | 1000.0 | 14400 | < th | dose independent | sin | 3 | NA |
| 578 | 109.31 | atmosphere | 1000.0 | 14400 | > th | dose independent | sin | 4 | NA |
| 619 | 109.38 | temperature | 20.0 | 720 | > th | dose independent | rect. | 10 | 17 |
| 637 | 109.40 | atmosphere | 1000.0 | 14400 | < th | dose dependent | sin | 1 | NA |
| 769 | 109.58 | wind | 7.0 | 4320 | > th | dose dependent | sin | 14 | NA |
| 830 | 109.66 | atmosphere | 995.0 | 14400 | > th | dose independent | rect. | 16 | 2 |