Os02g0469200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os02g0469200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 20.76 | 0.214 | 11 | -0.253 | 0.124 | -0.0025 | 0.444 | -1.58 | 0.156 | 21.9 | 12.03 | 555 | -- | -- |
| 21.79 | 0.219 | 11 | 0.0152 | 0.114 | -0.256 | 0.183 | -- | 0.215 | 21.2 | 29.26 | 1755 | -- | -- |
| 21.09 | 0.214 | 11 | -0.228 | 0.128 | -0.0172 | -- | -1.49 | 0.168 | 21 | 12.67 | 251 | -- | -- |
| 21.86 | 0.219 | 11 | 0.00944 | 0.119 | -0.284 | -- | -- | 0.214 | 20.5 | 29.63 | 208 | -- | -- |
| 21.95 | 0.218 | 11 | -0.218 | -- | 0.0164 | -- | -1.42 | 0.166 | -- | 13.15 | 239 | -- | -- |
| 22.39 | 0.222 | 11 | 0.00141 | 0.112 | -- | 0.25 | -- | 0.223 | 22.7 | -- | -- | -- | -- |
| 22.6 | 0.223 | 11 | -0.00762 | 0.116 | -- | -- | -- | 0.223 | 21.7 | -- | -- | -- | -- |
| 22.65 | 0.223 | 11 | 0.00821 | -- | -0.271 | -- | -- | 0.213 | -- | 29.63 | 208 | -- | -- |
| 21.76 | 0.217 | 11 | -- | 0.142 | -0.263 | -- | -- | 0.209 | 20.4 | 29.5 | 158 | -- | -- |
| 23.4 | 0.226 | 11 | -0.00656 | -- | -- | -- | -- | 0.223 | -- | -- | -- | -- | -- |
| 22.6 | 0.222 | 11 | -- | 0.116 | -- | -- | -- | 0.224 | 21.7 | -- | -- | -- | -- |
| 22.58 | 0.222 | 11 | -- | -- | -0.319 | -- | -- | 0.211 | -- | 30.49 | 36 | -- | -- |
| 23.4 | 0.226 | 11 | -- | -- | -- | -- | -- | 0.224 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 20.26 | humidity | 90 | 14400 | > th | dose dependent | rect. | 24 | 2 |
| 2 | 20.28 | wind | 3 | 1440 | < th | dose dependent | rect. | 2 | 1 |
| 3 | 20.29 | atmosphere | 1005 | 270 | > th | dose dependent | rect. | 22 | 8 |
| 5 | 20.30 | humidity | 90 | 14400 | > th | dose dependent | rect. | 23 | 8 |
| 7 | 20.32 | humidity | 90 | 14400 | > th | dose dependent | rect. | 3 | 4 |
| 12 | 20.35 | temperature | 25 | 720 | > th | dose dependent | rect. | 7 | 7 |
| 14 | 20.36 | radiation | 20 | 1440 | < th | dose dependent | rect. | 11 | 1 |
| 22 | 20.38 | humidity | 90 | 14400 | > th | dose dependent | rect. | 5 | 1 |
| 24 | 20.38 | atmosphere | 1005 | 720 | > th | dose dependent | rect. | 21 | 1 |
| 38 | 20.40 | temperature | 20 | 1440 | < th | dose independent | rect. | 5 | 1 |
| 39 | 20.40 | radiation | 20 | 1440 | < th | dose independent | rect. | 11 | 1 |
| 40 | 20.40 | temperature | 20 | 1440 | > th | dose independent | rect. | 5 | 2 |
| 60 | 20.44 | atmosphere | 1005 | 30 | > th | dose dependent | rect. | 23 | 10 |
| 61 | 20.45 | temperature | 20 | 1440 | > th | dose independent | rect. | 2 | 5 |
| 62 | 20.45 | temperature | 25 | 720 | > th | dose independent | rect. | 23 | 8 |
| 63 | 20.45 | temperature | 25 | 720 | > th | dose dependent | sin | 4 | NA |
| 68 | 20.46 | temperature | 20 | 1440 | < th | dose independent | rect. | 2 | 5 |
| 81 | 20.47 | atmosphere | 1005 | 720 | > th | dose dependent | rect. | 19 | 7 |
| 83 | 20.47 | temperature | 25 | 720 | > th | dose dependent | rect. | 23 | 8 |
| 135 | 20.53 | temperature | 15 | 720 | > th | dose dependent | rect. | 3 | 18 |
| 136 | 20.53 | temperature | 10 | 720 | > th | dose dependent | rect. | 3 | 20 |
| 139 | 20.54 | wind | 9 | 1440 | < th | dose independent | rect. | 24 | 10 |
| 170 | 20.57 | temperature | 20 | 1440 | < th | dose independent | rect. | 21 | 10 |
| 178 | 20.58 | temperature | 20 | 1440 | < th | dose independent | rect. | 3 | 1 |
| 203 | 20.59 | radiation | 30 | 4320 | < th | dose independent | rect. | 20 | 11 |
| 249 | 20.62 | radiation | 1 | 1440 | < th | dose independent | rect. | 10 | 3 |
| 255 | 20.62 | radiation | 1 | 1440 | < th | dose dependent | rect. | 10 | 3 |
| 263 | 20.62 | temperature | 10 | 720 | > th | dose dependent | rect. | 20 | 20 |
| 276 | 20.63 | temperature | 15 | 720 | > th | dose dependent | rect. | 3 | 14 |
| 295 | 20.64 | temperature | 15 | 720 | > th | dose dependent | sin | 0 | NA |
| 304 | 20.64 | temperature | 15 | 270 | > th | dose dependent | rect. | 11 | 13 |
| 325 | 20.65 | temperature | 15 | 720 | > th | dose dependent | rect. | 22 | 18 |
| 341 | 20.66 | humidity | 90 | 14400 | > th | dose dependent | sin | 9 | NA |
| 379 | 20.67 | temperature | 15 | 30 | > th | dose dependent | rect. | 12 | 14 |
| 423 | 20.69 | radiation | 1 | 1440 | < th | dose independent | rect. | 12 | 2 |
| 431 | 20.69 | radiation | 1 | 1440 | < th | dose dependent | rect. | 12 | 2 |
| 447 | 20.70 | temperature | 20 | 1440 | > th | dose independent | sin | 9 | NA |
| 456 | 20.70 | temperature | 10 | 90 | > th | dose dependent | sin | 15 | NA |
| 460 | 20.70 | radiation | 1 | 1440 | > th | dose dependent | rect. | 11 | 2 |
| 498 | 20.71 | wind | 1 | 1440 | > th | dose dependent | rect. | 2 | 1 |
| 519 | 20.72 | temperature | 20 | 1440 | < th | dose independent | sin | 9 | NA |
| 524 | 20.72 | humidity | 90 | 14400 | > th | dose independent | rect. | 23 | 8 |
| 543 | 20.72 | temperature | 30 | 1440 | < th | dose dependent | rect. | 2 | 8 |
| 587 | 20.73 | temperature | 10 | 1440 | > th | dose dependent | rect. | 2 | 8 |
| 609 | 20.73 | temperature | 30 | 720 | < th | dose dependent | rect. | 6 | 22 |
| 651 | 20.75 | humidity | 90 | 14400 | > th | dose independent | rect. | 3 | 4 |
| 660 | 20.75 | radiation | 40 | 10 | < th | dose independent | rect. | 9 | 14 |
| 663 | 20.75 | temperature | 30 | 90 | < th | dose dependent | sin | 15 | NA |
| 697 | 20.76 | wind | 9 | 1440 | < th | dose independent | rect. | 24 | 8 |
| 707 | 20.76 | temperature | 30 | 1440 | < th | dose dependent | rect. | 5 | 3 |
| 726 | 20.76 | humidity | 90 | 4320 | > th | dose dependent | rect. | 2 | 12 |
| 768 | 20.77 | temperature | 10 | 1440 | > th | dose dependent | rect. | 2 | 1 |
| 770 | 20.77 | temperature | 25 | 1440 | < th | dose dependent | rect. | 6 | 1 |
| 773 | 20.77 | temperature | 10 | 1440 | > th | dose dependent | rect. | 5 | 3 |
| 824 | 20.78 | temperature | 20 | 30 | > th | dose independent | rect. | 18 | 8 |
| 834 | 20.78 | temperature | 25 | 1440 | < th | dose dependent | rect. | 2 | 1 |
| 864 | 20.78 | temperature | 15 | 30 | > th | dose dependent | rect. | 12 | 18 |
| 943 | 20.80 | temperature | 20 | 30 | > th | dose independent | rect. | 20 | 6 |
| 967 | 20.80 | temperature | 15 | 720 | > th | dose dependent | rect. | 11 | 4 |
| 974 | 20.80 | temperature | 15 | 720 | > th | dose dependent | rect. | 9 | 7 |