Os02g0460200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os02g0460200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = rect.)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 207.1 | 0.676 | 13.5 | 3.34 | 1.26 | -1.73 | -2.31 | -6.01 | 1.93 | 9.89 | 14.98 | 263 | 17.1 | 7.85 |
| 222.6 | 0.695 | 13.5 | 3.49 | 1.42 | -1.66 | 0.428 | -- | 1.91 | 10 | 15.2 | 274 | 17.2 | 7.09 |
| 211.34 | 0.677 | 13.5 | 3.34 | 1.7 | -1.32 | -- | -3.86 | 1.97 | 9.93 | 18.46 | 205 | 17.8 | 7.75 |
| 221.81 | 0.694 | 13.5 | 3.55 | 1.47 | -1.66 | -- | -- | 1.98 | 9.91 | 16.21 | 277 | 17.4 | 7 |
| 230.74 | 0.707 | 13.5 | 3.8 | -- | -2.62 | -- | -0.771 | 2.02 | -- | 3.957 | 285 | 15.8 | 9.52 |
| 249.14 | 0.74 | 13.5 | 3.45 | 2.38 | -- | 0.695 | -- | 1.92 | 10.2 | -- | -- | -- | -- |
| 251.07 | 0.742 | 13.5 | 3.47 | 2.38 | -- | -- | -- | 1.92 | 10.2 | -- | -- | -- | -- |
| 228.44 | 0.704 | 13.5 | 3.72 | -- | -2.82 | -- | -- | 2.04 | -- | 1.264 | 362 | 15.3 | 9.08 |
| 554.67 | 1.1 | 13.5 | -- | 1.85 | -1.05 | -- | -- | 1.64 | 9.82 | 15.76 | 201 | 18.2 | 6.65 |
| 595.19 | 1.14 | 13.5 | 3.44 | -- | -- | -- | -- | 1.91 | -- | -- | -- | -- | -- |
| 568.95 | 1.12 | 13.5 | -- | 2.36 | -- | -- | -- | 1.53 | 10.1 | -- | -- | -- | -- |
| 551.97 | 1.09 | 13.6 | -- | -- | -2.67 | -- | -- | 1.57 | -- | -45.4 | 393 | 15.1 | 8.12 |
| 907.05 | 1.41 | 13.6 | -- | -- | -- | -- | -- | 1.53 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 207.43 | temperature | 15.0 | 270 | > th | dose dependent | rect. | 17 | 8 |
| 5 | 211.47 | atmosphere | 995.0 | 10 | > th | dose dependent | rect. | 14 | 17 |
| 9 | 212.36 | atmosphere | 995.0 | 90 | > th | dose dependent | rect. | 13 | 18 |
| 13 | 213.29 | temperature | 20.0 | 270 | > th | dose independent | rect. | 16 | 9 |
| 23 | 214.89 | atmosphere | 1000.0 | 270 | > th | dose independent | rect. | 12 | 17 |
| 39 | 215.93 | temperature | 15.0 | 270 | > th | dose dependent | rect. | 17 | 18 |
| 48 | 216.46 | atmosphere | 995.0 | 14400 | < th | dose independent | rect. | 17 | 2 |
| 51 | 216.52 | atmosphere | 1005.0 | 14400 | < th | dose independent | rect. | 22 | 1 |
| 52 | 216.53 | atmosphere | 995.0 | 14400 | < th | dose dependent | rect. | 17 | 2 |
| 75 | 216.87 | atmosphere | 995.0 | 14400 | > th | dose independent | rect. | 17 | 1 |
| 76 | 216.88 | wind | 9.0 | 43200 | > th | dose independent | rect. | 17 | 4 |
| 80 | 217.06 | atmosphere | 995.0 | 14400 | > th | dose independent | rect. | 16 | 3 |
| 98 | 217.26 | temperature | 25.0 | 270 | > th | dose dependent | rect. | 19 | 13 |
| 99 | 217.29 | atmosphere | 1005.0 | 14400 | > th | dose independent | rect. | 11 | 1 |
| 109 | 217.56 | temperature | 25.0 | 270 | > th | dose independent | rect. | 18 | 5 |
| 110 | 217.58 | temperature | 25.0 | 270 | > th | dose independent | rect. | 18 | 14 |
| 111 | 217.60 | atmosphere | 1000.0 | 10 | > th | dose independent | rect. | 14 | 17 |
| 113 | 217.74 | wind | 9.0 | 14400 | > th | dose dependent | rect. | 13 | 2 |
| 116 | 217.79 | wind | 9.0 | 43200 | < th | dose independent | rect. | 17 | 4 |
| 132 | 217.98 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 17 | 2 |
| 135 | 218.05 | atmosphere | 1015.0 | 270 | < th | dose dependent | rect. | 17 | 6 |
| 146 | 218.29 | temperature | 25.0 | 270 | > th | dose independent | rect. | 19 | 3 |
| 147 | 218.30 | wind | 9.0 | 43200 | > th | dose dependent | rect. | 16 | 6 |
| 162 | 218.62 | wind | 7.0 | 14400 | < th | dose independent | rect. | 19 | 7 |
| 166 | 218.70 | atmosphere | 995.0 | 14400 | > th | dose independent | rect. | 13 | 6 |
| 167 | 218.71 | wind | 9.0 | 14400 | > th | dose independent | rect. | 13 | 1 |
| 174 | 218.78 | wind | 5.0 | 14400 | > th | dose independent | rect. | 20 | 1 |
| 177 | 218.83 | wind | 9.0 | 43200 | > th | dose independent | rect. | 17 | 1 |
| 193 | 219.00 | atmosphere | 1005.0 | 14400 | < th | dose independent | rect. | 11 | 1 |
| 224 | 219.06 | temperature | 15.0 | 10 | > th | dose dependent | rect. | 19 | 19 |
| 226 | 219.09 | wind | 7.0 | 14400 | > th | dose independent | rect. | 18 | 8 |
| 239 | 219.22 | wind | 5.0 | 14400 | < th | dose independent | rect. | 20 | 1 |
| 243 | 219.25 | wind | 5.0 | 14400 | > th | dose dependent | rect. | 19 | 7 |
| 244 | 219.26 | wind | 9.0 | 43200 | > th | dose dependent | rect. | 14 | 7 |
| 251 | 219.30 | temperature | 20.0 | 10 | > th | dose dependent | rect. | 20 | 7 |
| 253 | 219.32 | temperature | 20.0 | 10 | > th | dose independent | rect. | 19 | 19 |
| 259 | 219.37 | temperature | 20.0 | 90 | > th | dose independent | rect. | 19 | 18 |
| 271 | 219.49 | wind | 5.0 | 14400 | > th | dose independent | rect. | 20 | 3 |
| 338 | 219.86 | atmosphere | 1005.0 | 43200 | < th | dose dependent | rect. | 15 | 1 |
| 366 | 220.04 | wind | 1.0 | 4320 | < th | dose independent | rect. | 4 | 1 |
| 376 | 220.12 | wind | 1.0 | 14400 | < th | dose dependent | rect. | 2 | 1 |
| 378 | 220.13 | wind | 7.0 | 14400 | > th | dose dependent | rect. | 19 | 1 |
| 413 | 220.33 | wind | 9.0 | 43200 | < th | dose independent | rect. | 17 | 1 |
| 457 | 220.68 | temperature | 20.0 | 10 | > th | dose independent | rect. | 19 | 7 |
| 506 | 221.09 | atmosphere | 1000.0 | 270 | < th | dose independent | rect. | 16 | 7 |
| 586 | 221.42 | atmosphere | 1000.0 | 270 | < th | dose independent | sin | 17 | NA |
| 600 | 221.46 | atmosphere | 1000.0 | 270 | > th | dose independent | sin | 16 | NA |
| 605 | 221.47 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 20 | 1 |
| 667 | 221.81 | radiation | 10.0 | 14400 | < th | dose dependent | rect. | 19 | 8 |
| 686 | 221.96 | humidity | 60.0 | 14400 | < th | dose dependent | rect. | 18 | 1 |
| 734 | 222.21 | wind | 9.0 | 14400 | < th | dose independent | rect. | 13 | 1 |
| 789 | 222.44 | atmosphere | 1010.0 | 43200 | < th | dose dependent | rect. | 8 | 1 |
| 796 | 222.45 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 17 | 2 |
| 802 | 222.48 | wind | 1.0 | 43200 | < th | dose dependent | rect. | 19 | 2 |
| 837 | 222.67 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 17 | 2 |
| 838 | 222.67 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 17 | 2 |
| 841 | 222.69 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 3 | 1 |
| 866 | 222.76 | atmosphere | 1015.0 | 10 | < th | dose dependent | rect. | 19 | 7 |
| 896 | 222.88 | atmosphere | 1005.0 | 43200 | < th | dose independent | rect. | 5 | 6 |
| 900 | 222.90 | wind | 1.0 | 14400 | < th | dose dependent | rect. | 9 | 2 |
| 908 | 222.93 | temperature | 25.0 | 270 | > th | dose independent | sin | 11 | NA |
| 958 | 223.07 | atmosphere | 1005.0 | 43200 | > th | dose independent | rect. | 22 | 1 |
| 965 | 223.09 | humidity | 60.0 | 14400 | < th | dose independent | rect. | 18 | 1 |
| 967 | 223.10 | atmosphere | 1005.0 | 43200 | < th | dose dependent | sin | 23 | NA |
| 985 | 223.16 | wind | 9.0 | 43200 | > th | dose independent | rect. | 14 | 7 |