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Os02g0437200

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Similar to SNAP-34.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 11.6 (0.0229) R2 : 0.296
β1 : -- (--) R2dD : -- R2D : --
β2 : 0.77 (0.0559) R2dC : 0.294 R2C : 0.295
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.0357 (0.0483) R2dN8 : 0.00109 R2N8 : 0.00147
σ : 0.433
deviance : 85.69
__
_____
C
peak time of C : 1.99
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = precipitation, response mode = < th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
71.39 0.397 11.6 -0.514 0.78 -7.33 -0.256 19 0.0252 2.14 0.0682 94 -- --
75.55 0.405 11.5 -0.523 0.839 -2.3 -0.512 -- -0.0616 2.36 0.5463 86 -- --
71.63 0.394 11.6 -0.508 0.779 -7.42 -- 19.4 0.0271 2.09 0.2367 93 -- --
74.4 0.402 11.6 -0.382 0.79 -2.04 -- -- 0.0219 2.18 0.5 86 -- --
107.91 0.484 11.6 -0.47 -- -7.21 -- 18.7 0.0451 -- 0.4052 86 -- --
82.64 0.426 11.6 -0.333 0.778 -- -0.27 -- -0.00228 2.06 -- -- -- --
82.91 0.426 11.6 -0.325 0.777 -- -- -- -0.000516 2 -- -- -- --
110.55 0.49 11.6 -0.363 -- -2.07 -- -- 0.0344 -- 0.2445 86 -- --
78.51 0.413 11.5 -- 0.773 -1.91 -- -- 0.0578 2.15 0.01014 86 -- --
119.19 0.51 11.6 -0.293 -- -- -- -- 0.0177 -- -- -- -- --
85.69 0.433 11.6 -- 0.77 -- -- -- 0.0357 1.99 -- -- -- --
114.04 0.497 11.5 -- -- -1.92 -- -- 0.0722 -- 0.3551 86 -- --
121.45 0.514 11.5 -- -- -- -- -- 0.0501 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 68.10 radiation 10.0 4320 < th dose dependent rect. 24 5
2 68.67 radiation 10.0 4320 < th dose dependent rect. 21 8
6 69.01 radiation 40.0 14400 < th dose dependent rect. 24 5
8 69.18 radiation 40.0 14400 < th dose dependent rect. 21 8
11 69.48 humidity 70.0 30 > th dose dependent rect. 5 15
14 69.61 temperature 20.0 14400 > th dose independent rect. 21 2
16 69.64 temperature 20.0 14400 < th dose independent rect. 21 2
20 69.74 radiation 10.0 270 < th dose dependent rect. 3 15
22 69.76 radiation 40.0 10 < th dose dependent rect. 5 18
33 69.92 radiation 1.0 4320 < th dose independent rect. 24 5
34 69.93 precipitation 0.1 90 > th dose independent rect. 2 17
44 70.01 temperature 10.0 43200 > th dose independent rect. 10 7
45 70.01 radiation 1.0 4320 < th dose independent rect. 21 8
70 70.24 humidity 70.0 30 > th dose dependent rect. 5 18
81 70.33 radiation 1.0 10 > th dose dependent rect. 13 23
99 70.47 radiation 20.0 1440 < th dose independent rect. 11 1
104 70.49 precipitation 0.1 90 > th dose independent rect. 21 22
117 70.55 radiation 20.0 30 < th dose independent rect. 5 18
149 70.69 temperature 20.0 1440 > th dose independent rect. 21 2
150 70.69 radiation 40.0 10 < th dose dependent rect. 1 23
151 70.70 temperature 20.0 14400 > th dose independent sin 16 NA
182 70.82 radiation 10.0 270 < th dose dependent sin 2 NA
186 70.84 radiation 40.0 90 < th dose dependent rect. 12 23
205 70.89 precipitation 0.1 90 > th dose independent rect. 14 18
216 70.91 temperature 20.0 1440 > th dose independent rect. 20 5
219 70.92 temperature 20.0 1440 < th dose independent rect. 21 2
225 70.95 temperature 20.0 720 > th dose independent rect. 16 15
227 70.96 temperature 20.0 14400 < th dose independent sin 16 NA
259 71.02 radiation 20.0 270 < th dose independent rect. 11 20
267 71.04 radiation 10.0 270 < th dose independent rect. 2 16
272 71.05 temperature 25.0 14400 < th dose dependent rect. 17 1
276 71.06 humidity 80.0 30 > th dose independent rect. 5 15
306 71.14 temperature 20.0 1440 < th dose independent rect. 19 8
311 71.14 atmosphere 995.0 43200 > th dose independent rect. 1 14
322 71.17 atmosphere 995.0 43200 > th dose independent rect. 23 16
325 71.18 temperature 20.0 1440 > th dose independent rect. 6 1
332 71.19 precipitation 0.1 90 < th dose independent sin 1 NA
335 71.19 precipitation 0.1 90 < th dose dependent sin 1 NA
342 71.21 atmosphere 995.0 43200 < th dose independent sin 4 NA
343 71.21 wind 5.0 14400 > th dose independent rect. 7 2
349 71.22 atmosphere 995.0 43200 < th dose dependent rect. 12 13
350 71.22 radiation 40.0 10 < th dose dependent rect. 5 15
351 71.23 atmosphere 995.0 43200 > th dose independent sin 5 NA
360 71.23 atmosphere 995.0 43200 < th dose dependent sin 17 NA
376 71.26 wind 5.0 14400 < th dose independent rect. 7 2
391 71.29 temperature 20.0 720 > th dose independent sin 13 NA
394 71.29 atmosphere 995.0 43200 < th dose independent rect. 2 13
411 71.31 radiation 10.0 4320 < th dose dependent rect. 19 10
412 71.31 atmosphere 995.0 43200 < th dose dependent rect. 11 15
435 71.35 atmosphere 995.0 43200 > th dose independent rect. 19 20
446 71.36 radiation 10.0 270 < th dose dependent rect. 21 23
447 71.37 precipitation 0.1 90 > th dose independent sin 1 NA
450 71.37 atmosphere 1000.0 10 > th dose independent rect. 17 15
460 71.38 humidity 50.0 14400 > th dose independent rect. 18 15
492 71.41 precipitation 0.1 90 > th dose independent no NA NA
493 71.41 precipitation 0.1 90 < th dose independent no NA NA
504 71.41 precipitation 0.1 90 < th dose dependent no NA NA
505 71.41 temperature 25.0 14400 < th dose dependent rect. 12 6
514 71.42 wind 9.0 43200 > th dose dependent rect. 20 11
517 71.43 precipitation 0.1 90 > th dose independent rect. 7 23
519 71.43 radiation 10.0 270 < th dose dependent rect. 24 23
524 71.44 atmosphere 995.0 43200 < th dose independent rect. 18 21
526 71.44 radiation 30.0 270 < th dose dependent rect. 15 16
534 71.45 temperature 25.0 14400 < th dose dependent rect. 13 1
543 71.46 wind 5.0 14400 > th dose dependent rect. 7 2
555 71.47 atmosphere 995.0 43200 < th dose dependent rect. 14 20
561 71.48 radiation 10.0 270 > th dose independent rect. 16 22
577 71.51 wind 9.0 43200 > th dose independent rect. 20 11
592 71.53 wind 9.0 43200 < th dose independent rect. 20 11
610 71.54 radiation 40.0 14400 < th dose dependent rect. 19 10
619 71.55 wind 7.0 43200 > th dose dependent rect. 17 15
622 71.56 radiation 30.0 4320 < th dose independent rect. 7 1
625 71.56 temperature 20.0 14400 > th dose independent rect. 16 17
632 71.57 wind 7.0 43200 > th dose independent rect. 17 15
672 71.61 wind 7.0 43200 < th dose independent rect. 17 15
683 71.61 humidity 50.0 90 > th dose dependent rect. 16 17
702 71.63 humidity 90.0 14400 < th dose independent rect. 17 1
727 71.65 temperature 20.0 1440 < th dose independent rect. 18 13
732 71.65 radiation 20.0 1440 < th dose dependent rect. 11 1
740 71.66 temperature 20.0 1440 < th dose independent sin 13 NA
759 71.67 humidity 90.0 14400 > th dose independent rect. 21 2
782 71.69 temperature 20.0 1440 < th dose independent rect. 6 1
793 71.69 precipitation 0.1 90 > th dose dependent rect. 2 17
808 71.71 wind 9.0 43200 > th dose independent sin 11 NA
856 71.74 temperature 20.0 14400 < th dose independent rect. 16 17
862 71.74 humidity 90.0 10 < th dose dependent rect. 7 10
865 71.75 wind 9.0 43200 < th dose independent sin 11 NA
898 71.76 radiation 1.0 10 > th dose dependent rect. 8 9
901 71.76 humidity 60.0 30 > th dose dependent rect. 5 13
919 71.78 radiation 30.0 4320 < th dose independent rect. 5 3
956 71.79 radiation 20.0 90 < th dose independent rect. 11 23