Os02g0324300
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Protein of unknown function DUF572 family protein.
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Os02g0324300 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Protein of unknown function DUF572 family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 33.63 | 0.272 | 14.3 | 0.844 | 0.573 | -1.03 | 0.477 | -0.773 | 0.774 | 1.72 | 23.1 | 267 | -- | -- |
| 34.34 | 0.273 | 14.3 | 0.802 | 0.583 | -0.86 | 0.385 | -- | 0.768 | 1.56 | 23.21 | 260 | -- | -- |
| 34.44 | 0.273 | 14.3 | 0.811 | 0.562 | -0.995 | -- | -0.562 | 0.766 | 1.67 | 23.1 | 273 | -- | -- |
| 34.7 | 0.274 | 14.3 | 0.745 | 0.566 | -0.897 | -- | -- | 0.756 | 1.63 | 23.2 | 258 | -- | -- |
| 47.62 | 0.321 | 14.3 | 0.766 | -- | -0.859 | -- | -0.257 | 0.714 | -- | 25.7 | 932 | -- | -- |
| 43.8 | 0.31 | 14.3 | 0.966 | 0.489 | -- | 0.356 | -- | 0.888 | 1.41 | -- | -- | -- | -- |
| 44.31 | 0.312 | 14.3 | 0.954 | 0.488 | -- | -- | -- | 0.886 | 1.36 | -- | -- | -- | -- |
| 47.7 | 0.322 | 14.3 | 0.726 | -- | -0.84 | -- | -- | 0.709 | -- | 26.08 | 937 | -- | -- |
| 44.14 | 0.309 | 14.3 | -- | 0.493 | -0.963 | -- | -- | 0.634 | 1.27 | 19.87 | 13266 | -- | -- |
| 59 | 0.359 | 14.3 | 0.973 | -- | -- | -- | -- | 0.896 | -- | -- | -- | -- | -- |
| 68.3 | 0.387 | 14.3 | -- | 0.505 | -- | -- | -- | 0.78 | 1.43 | -- | -- | -- | -- |
| 55.46 | 0.347 | 14.4 | -- | -- | -0.911 | -- | -- | 0.608 | -- | 19.63 | 47520 | -- | -- |
| 83.99 | 0.428 | 14.3 | -- | -- | -- | -- | -- | 0.788 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 30.84 | wind | 3.0 | 43200 | < th | dose dependent | rect. | 5 | 1 |
| 2 | 31.43 | wind | 1.0 | 43200 | > th | dose independent | rect. | 4 | 4 |
| 3 | 31.47 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 4 | 12 |
| 4 | 31.52 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 4 | 12 |
| 5 | 31.52 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 4 | 12 |
| 6 | 31.56 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 7 | 1 |
| 7 | 31.56 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 7 | 1 |
| 8 | 31.58 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 4 | 6 |
| 9 | 31.59 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 4 | 10 |
| 10 | 31.61 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 4 | 10 |
| 11 | 31.64 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 7 | 1 |
| 12 | 31.64 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 7 | 1 |
| 13 | 31.67 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 4 | 10 |
| 14 | 31.67 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 4 | 10 |
| 15 | 31.70 | wind | 1.0 | 43200 | > th | dose independent | rect. | 5 | 2 |
| 16 | 31.70 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 4 | 12 |
| 18 | 31.76 | wind | 1.0 | 43200 | < th | dose dependent | rect. | 5 | 3 |
| 19 | 31.79 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 4 | 6 |
| 23 | 31.87 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 4 | 6 |
| 24 | 31.87 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 4 | 6 |
| 26 | 31.92 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 4 | 4 |
| 27 | 31.95 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 4 | 4 |
| 32 | 32.05 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 4 | 4 |
| 33 | 32.05 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 4 | 4 |
| 35 | 32.11 | wind | 1.0 | 14400 | < th | dose independent | rect. | 4 | 4 |
| 36 | 32.11 | wind | 1.0 | 14400 | > th | dose independent | rect. | 2 | 6 |
| 39 | 32.18 | wind | 1.0 | 14400 | < th | dose independent | rect. | 2 | 6 |
| 48 | 32.28 | wind | 1.0 | 43200 | > th | dose independent | rect. | 22 | 9 |
| 51 | 32.29 | wind | 1.0 | 14400 | < th | dose dependent | rect. | 2 | 6 |
| 70 | 32.61 | wind | 1.0 | 43200 | < th | dose independent | rect. | 22 | 9 |
| 80 | 32.71 | humidity | 80.0 | 43200 | < th | dose independent | rect. | 6 | 1 |
| 84 | 32.72 | wind | 1.0 | 43200 | < th | dose dependent | rect. | 2 | 11 |
| 88 | 32.74 | wind | 1.0 | 43200 | > th | dose dependent | rect. | 5 | 1 |
| 93 | 32.80 | humidity | 80.0 | 43200 | > th | dose independent | rect. | 6 | 1 |
| 101 | 32.87 | wind | 3.0 | 14400 | < th | dose dependent | rect. | 23 | 2 |
| 123 | 33.03 | wind | 3.0 | 14400 | < th | dose dependent | rect. | 21 | 9 |
| 140 | 33.13 | humidity | 80.0 | 14400 | > th | dose independent | rect. | 13 | 1 |
| 183 | 33.32 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 18 | 2 |
| 225 | 33.46 | temperature | 25.0 | 720 | < th | dose dependent | rect. | 15 | 11 |
| 227 | 33.47 | humidity | 80.0 | 14400 | > th | dose dependent | rect. | 13 | 1 |
| 231 | 33.48 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 7 | 9 |
| 233 | 33.48 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 7 | 9 |
| 238 | 33.49 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 7 | 9 |
| 272 | 33.61 | temperature | 25.0 | 720 | < th | dose dependent | sin | 17 | NA |
| 287 | 33.63 | temperature | 25.0 | 720 | < th | dose dependent | rect. | 11 | 15 |
| 334 | 33.75 | temperature | 25.0 | 270 | < th | dose dependent | rect. | 16 | 17 |
| 339 | 33.77 | temperature | 25.0 | 270 | < th | dose dependent | sin | 11 | NA |
| 342 | 33.78 | wind | 1.0 | 43200 | > th | dose independent | sin | 8 | NA |
| 365 | 33.82 | wind | 1.0 | 14400 | > th | dose dependent | rect. | 23 | 3 |
| 380 | 33.85 | temperature | 25.0 | 270 | < th | dose dependent | rect. | 9 | 22 |
| 403 | 33.91 | wind | 1.0 | 43200 | < th | dose independent | sin | 9 | NA |
| 419 | 33.93 | wind | 1.0 | 14400 | > th | dose dependent | rect. | 22 | 8 |
| 450 | 33.99 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 9 | 1 |
| 507 | 34.09 | humidity | 80.0 | 14400 | < th | dose independent | rect. | 13 | 1 |
| 534 | 34.12 | temperature | 25.0 | 270 | < th | dose dependent | rect. | 16 | 14 |
| 538 | 34.13 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 7 | 7 |
| 540 | 34.13 | wind | 3.0 | 14400 | < th | dose dependent | sin | 9 | NA |
| 548 | 34.14 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 7 | 7 |
| 554 | 34.14 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 7 | 7 |
| 596 | 34.19 | precipitation | 0.1 | 14400 | > th | dose independent | sin | 2 | NA |
| 606 | 34.20 | precipitation | 0.1 | 14400 | < th | dose independent | sin | 2 | NA |
| 611 | 34.20 | precipitation | 0.1 | 14400 | < th | dose dependent | sin | 2 | NA |
| 628 | 34.22 | wind | 1.0 | 14400 | > th | dose dependent | rect. | 22 | 6 |
| 663 | 34.27 | humidity | 60.0 | 14400 | < th | dose dependent | rect. | 12 | 3 |
| 694 | 34.32 | wind | 1.0 | 43200 | < th | dose dependent | rect. | 12 | 1 |
| 790 | 34.43 | humidity | 80.0 | 14400 | > th | dose independent | rect. | 10 | 5 |
| 825 | 34.46 | temperature | 25.0 | 270 | < th | dose dependent | no | NA | NA |
| 891 | 34.54 | humidity | 80.0 | 14400 | > th | dose dependent | rect. | 9 | 6 |
| 901 | 34.55 | wind | 1.0 | 14400 | > th | dose dependent | rect. | 1 | 1 |
| 906 | 34.56 | humidity | 80.0 | 14400 | > th | dose independent | rect. | 10 | 1 |
| 930 | 34.58 | humidity | 60.0 | 14400 | < th | dose dependent | rect. | 12 | 21 |
| 957 | 34.61 | temperature | 25.0 | 720 | < th | dose dependent | rect. | 19 | 2 |
| 986 | 34.63 | humidity | 60.0 | 14400 | < th | dose dependent | rect. | 12 | 8 |