Os02g0279600
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os02g0279600 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 32.53 | 0.268 | 10.1 | -0.294 | 0.223 | 0.361 | -0.311 | 0.894 | -0.105 | 22.9 | 61 | 4693 | -- | -- |
| 33.54 | 0.27 | 10.2 | -0.336 | 0.22 | 0.401 | -0.307 | -- | -0.118 | 22.6 | 64 | 4746 | -- | -- |
| 32.93 | 0.267 | 10.1 | -0.284 | 0.224 | 0.374 | -- | 0.873 | -0.107 | 22.8 | 61 | 4701 | -- | -- |
| 33.91 | 0.271 | 10.2 | -0.326 | 0.221 | 0.416 | -- | -- | -0.132 | 22.6 | 63.57 | 4752 | -- | -- |
| 35.94 | 0.279 | 10.1 | -0.277 | -- | 0.415 | -- | 0.787 | -0.117 | -- | 61.02 | 4573 | -- | -- |
| 36.43 | 0.283 | 10.1 | -0.323 | 0.221 | -- | -0.352 | -- | -0.0514 | 23.1 | -- | -- | -- | -- |
| 36.96 | 0.285 | 10.1 | -0.309 | 0.223 | -- | -- | -- | -0.0502 | 23.1 | -- | -- | -- | -- |
| 36.65 | 0.282 | 10.1 | -0.312 | -- | 0.452 | -- | -- | -0.136 | -- | 62.18 | 4564 | -- | -- |
| 36.7 | 0.282 | 10.1 | -- | 0.224 | 0.397 | -- | -- | -0.0936 | 22.5 | 64 | 4750 | -- | -- |
| 40.06 | 0.296 | 10.1 | -0.303 | -- | -- | -- | -- | -0.0483 | -- | -- | -- | -- | -- |
| 39.47 | 0.294 | 10.1 | -- | 0.22 | -- | -- | -- | -0.0158 | 23 | -- | -- | -- | -- |
| 39.21 | 0.292 | 10.1 | -- | -- | 0.441 | -- | -- | -0.106 | -- | 63 | 4515 | -- | -- |
| 42.49 | 0.304 | 10.1 | -- | -- | -- | -- | -- | -0.0147 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 32.13 | humidity | 70 | 4320 | < th | dose independent | rect. | 18 | 1 |
| 3 | 32.19 | humidity | 60 | 4320 | < th | dose independent | rect. | 12 | 1 |
| 15 | 32.24 | humidity | 70 | 4320 | < th | dose dependent | rect. | 16 | 4 |
| 27 | 32.26 | humidity | 60 | 4320 | > th | dose independent | rect. | 12 | 1 |
| 31 | 32.36 | humidity | 70 | 4320 | > th | dose independent | rect. | 18 | 2 |
| 33 | 32.36 | humidity | 70 | 4320 | > th | dose independent | rect. | 18 | 10 |
| 60 | 32.49 | humidity | 60 | 4320 | < th | dose dependent | sin | 13 | NA |
| 74 | 32.50 | humidity | 60 | 4320 | > th | dose independent | sin | 14 | NA |
| 75 | 32.50 | humidity | 60 | 4320 | < th | dose independent | sin | 14 | NA |
| 90 | 32.53 | humidity | 60 | 4320 | > th | dose independent | rect. | 11 | 8 |
| 107 | 32.54 | humidity | 60 | 4320 | < th | dose independent | rect. | 12 | 7 |
| 163 | 32.56 | humidity | 60 | 4320 | > th | dose independent | rect. | 17 | 21 |
| 200 | 32.59 | humidity | 60 | 4320 | > th | dose independent | rect. | 16 | 3 |
| 206 | 32.60 | humidity | 60 | 4320 | > th | dose independent | rect. | 16 | 12 |
| 209 | 32.60 | humidity | 60 | 4320 | > th | dose independent | rect. | 16 | 16 |
| 246 | 32.64 | humidity | 60 | 4320 | < th | dose independent | rect. | 17 | 21 |
| 311 | 32.70 | humidity | 60 | 4320 | > th | dose independent | no | NA | NA |
| 500 | 32.77 | humidity | 60 | 4320 | > th | dose independent | rect. | 7 | 7 |
| 502 | 32.77 | humidity | 60 | 4320 | > th | dose independent | rect. | 3 | 11 |
| 513 | 32.78 | humidity | 50 | 4320 | > th | dose independent | rect. | 15 | 1 |
| 590 | 32.82 | humidity | 60 | 4320 | < th | dose independent | no | NA | NA |
| 856 | 32.92 | humidity | 70 | 4320 | < th | dose dependent | rect. | 10 | 10 |