Os02g0277600
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to MFDR (NADP adrenodoxin-like ferredoxin reductase).
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Os02g0277600 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to MFDR (NADP adrenodoxin-like ferredoxin reductase).
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 23.88 | 0.23 | 9.6 | -0.564 | 0.106 | 0.66 | 0.396 | 0.0167 | -0.0584 | 8.3 | 25.07 | 83 | -- | -- |
| 23.87 | 0.228 | 9.6 | -0.564 | 0.111 | 0.658 | 0.396 | -- | -0.0598 | 8.24 | 25.05 | 76 | -- | -- |
| 24.25 | 0.229 | 9.6 | -0.55 | 0.106 | 0.622 | -- | -0.098 | -0.0649 | 6.77 | 24.95 | 80 | -- | -- |
| 24.23 | 0.229 | 9.6 | -0.559 | 0.127 | 0.633 | -- | -- | -0.0714 | 6.66 | 24.73 | 74 | -- | -- |
| 24.94 | 0.233 | 9.6 | -0.537 | -- | 0.631 | -- | -0.111 | -0.0506 | -- | 25.53 | 77 | -- | -- |
| 29.95 | 0.257 | 9.63 | -0.711 | 0.19 | -- | -0.0792 | -- | -0.19 | 4.21 | -- | -- | -- | -- |
| 29.97 | 0.256 | 9.63 | -0.71 | 0.19 | -- | -- | -- | -0.189 | 4.4 | -- | -- | -- | -- |
| 24.96 | 0.233 | 9.6 | -0.557 | -- | 0.633 | -- | -- | -0.0571 | -- | 25.42 | 84 | -- | -- |
| 31.75 | 0.262 | 9.58 | -- | 0.0999 | 0.848 | -- | -- | 0.00936 | 7.89 | 24.66 | 80 | -- | -- |
| 31.91 | 0.264 | 9.63 | -0.703 | -- | -- | -- | -- | -0.184 | -- | -- | -- | -- | -- |
| 43.26 | 0.308 | 9.61 | -- | 0.177 | -- | -- | -- | -0.11 | 4.49 | -- | -- | -- | -- |
| 32.26 | 0.265 | 9.58 | -- | -- | 0.846 | -- | -- | 0.0349 | -- | 25.1 | 116 | -- | -- |
| 44.93 | 0.313 | 9.62 | -- | -- | -- | -- | -- | -0.106 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 22.26 | temperature | 30 | 30 | < th | dose dependent | rect. | 16 | 18 |
| 16 | 22.68 | temperature | 10 | 270 | > th | dose dependent | rect. | 11 | 15 |
| 61 | 23.16 | temperature | 10 | 720 | > th | dose dependent | rect. | 13 | 9 |
| 78 | 23.21 | temperature | 25 | 270 | < th | dose dependent | rect. | 11 | 20 |
| 104 | 23.31 | temperature | 10 | 30 | > th | dose dependent | sin | 13 | NA |
| 105 | 23.31 | temperature | 25 | 720 | < th | dose dependent | rect. | 11 | 13 |
| 111 | 23.32 | temperature | 30 | 10 | < th | dose dependent | sin | 14 | NA |
| 155 | 23.39 | temperature | 30 | 270 | < th | dose dependent | rect. | 14 | 9 |
| 192 | 23.46 | temperature | 10 | 720 | > th | dose dependent | sin | 18 | NA |
| 231 | 23.54 | temperature | 30 | 720 | < th | dose dependent | rect. | 15 | 4 |
| 280 | 23.61 | temperature | 30 | 10 | < th | dose dependent | rect. | 16 | 8 |
| 308 | 23.63 | temperature | 15 | 90 | > th | dose dependent | rect. | 10 | 23 |
| 321 | 23.65 | temperature | 30 | 720 | < th | dose dependent | sin | 18 | NA |
| 386 | 23.72 | temperature | 15 | 10 | > th | dose dependent | rect. | 14 | 15 |
| 419 | 23.75 | temperature | 15 | 10 | > th | dose dependent | rect. | 12 | 17 |
| 462 | 23.80 | temperature | 25 | 90 | < th | dose dependent | rect. | 3 | 23 |
| 526 | 23.86 | temperature | 25 | 10 | < th | dose dependent | rect. | 5 | 23 |
| 562 | 23.90 | temperature | 20 | 270 | > th | dose independent | rect. | 10 | 17 |
| 563 | 23.90 | temperature | 25 | 90 | < th | dose dependent | no | NA | NA |
| 609 | 23.94 | temperature | 25 | 90 | < th | dose dependent | rect. | 1 | 23 |
| 616 | 23.95 | temperature | 25 | 30 | < th | dose dependent | rect. | 9 | 23 |
| 627 | 23.96 | temperature | 25 | 30 | < th | dose dependent | rect. | 7 | 23 |
| 630 | 23.97 | temperature | 20 | 270 | > th | dose independent | rect. | 11 | 15 |
| 638 | 23.97 | temperature | 25 | 30 | < th | dose dependent | rect. | 19 | 23 |
| 639 | 23.97 | temperature | 25 | 30 | < th | dose dependent | rect. | 21 | 23 |
| 654 | 23.99 | temperature | 30 | 10 | < th | dose dependent | rect. | 16 | 10 |
| 660 | 23.99 | temperature | 25 | 30 | < th | dose dependent | rect. | 23 | 23 |
| 697 | 24.02 | temperature | 25 | 10 | < th | dose dependent | rect. | 5 | 21 |
| 797 | 24.11 | temperature | 25 | 720 | < th | dose dependent | rect. | 19 | 1 |
| 871 | 24.18 | temperature | 20 | 10 | > th | dose independent | rect. | 12 | 17 |