Os02g0276200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Isochorismatase hydrolase family protein.
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Os02g0276200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Isochorismatase hydrolase family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 462.73 | 1.01 | 4.15 | -3.63 | 1.11 | 1.8 | 0.839 | -12.8 | -1.05 | 6.39 | 24.97 | 1449 | -- | -- |
| 524.93 | 1.07 | 3.78 | -0.933 | 1.13 | 1.18 | 0.931 | -- | -0.502 | 6.37 | -33.93 | 39381 | -- | -- |
| 464.32 | 1 | 4.15 | -3.58 | 1.12 | 1.79 | -- | -12.7 | -1.05 | 6.52 | 24.93 | 1458 | -- | -- |
| 511.66 | 1.05 | 3.79 | -0.505 | 1.08 | 1.43 | -- | -- | -0.479 | 6.54 | -80.89 | 8630 | -- | -- |
| 525.35 | 1.07 | 4.16 | -3.43 | -- | 1.86 | -- | -12.2 | -1.07 | -- | 24.4 | 1385 | -- | -- |
| 542.66 | 1.09 | 3.68 | 0.224 | 1.07 | -- | 0.835 | -- | -0.048 | 6.34 | -- | -- | -- | -- |
| 544.29 | 1.09 | 3.69 | 0.236 | 1.07 | -- | -- | -- | -0.0502 | 6.48 | -- | -- | -- | -- |
| 568.59 | 1.11 | 3.81 | -0.524 | -- | 1.47 | -- | -- | -0.466 | -- | -67.77 | 8567 | -- | -- |
| 516.36 | 1.06 | 3.75 | -- | 1.05 | 1.11 | -- | -- | -0.338 | 6.66 | -74.94 | 8498 | -- | -- |
| 604.35 | 1.15 | 3.71 | 0.263 | -- | -- | -- | -- | -0.0278 | -- | -- | -- | -- | -- |
| 545.76 | 1.09 | 3.69 | -- | 1.08 | -- | -- | -- | -0.0764 | 6.47 | -- | -- | -- | -- |
| 573.56 | 1.12 | 3.78 | -- | -- | 1.16 | -- | -- | -0.334 | -- | -81.61 | 8548 | -- | -- |
| 606.17 | 1.15 | 3.71 | -- | -- | -- | -- | -- | -0.0569 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 457.15 | temperature | 25.0 | 1440 | > th | dose dependent | rect. | 13 | 20 |
| 5 | 458.55 | temperature | 25.0 | 1440 | > th | dose dependent | rect. | 13 | 11 |
| 23 | 459.09 | temperature | 25.0 | 1440 | > th | dose dependent | sin | 16 | NA |
| 38 | 459.70 | temperature | 25.0 | 4320 | > th | dose independent | rect. | 3 | 9 |
| 46 | 459.87 | temperature | 25.0 | 4320 | > th | dose independent | rect. | 5 | 7 |
| 48 | 459.94 | temperature | 25.0 | 4320 | < th | dose independent | rect. | 3 | 9 |
| 63 | 460.30 | temperature | 25.0 | 4320 | > th | dose dependent | rect. | 6 | 9 |
| 84 | 460.54 | temperature | 25.0 | 1440 | > th | dose dependent | rect. | 17 | 2 |
| 92 | 460.66 | temperature | 25.0 | 4320 | > th | dose dependent | rect. | 13 | 1 |
| 139 | 461.31 | temperature | 25.0 | 4320 | > th | dose dependent | sin | 4 | NA |
| 192 | 462.26 | temperature | 25.0 | 43200 | > th | dose independent | rect. | 10 | 1 |
| 194 | 462.28 | temperature | 25.0 | 43200 | < th | dose independent | rect. | 10 | 1 |
| 205 | 462.39 | temperature | 25.0 | 1440 | > th | dose dependent | rect. | 5 | 17 |
| 265 | 462.73 | temperature | 25.0 | 1440 | > th | dose dependent | rect. | 17 | 23 |
| 268 | 462.75 | temperature | 25.0 | 1440 | > th | dose dependent | no | NA | NA |
| 411 | 463.93 | temperature | 25.0 | 4320 | > th | dose independent | sin | 5 | NA |
| 508 | 465.20 | temperature | 25.0 | 4320 | < th | dose independent | sin | 5 | NA |
| 552 | 465.74 | temperature | 20.0 | 4320 | > th | dose dependent | rect. | 7 | 1 |
| 568 | 465.88 | temperature | 20.0 | 4320 | > th | dose dependent | rect. | 6 | 3 |
| 707 | 466.99 | temperature | 20.0 | 14400 | > th | dose independent | rect. | 24 | 1 |
| 722 | 467.04 | temperature | 20.0 | 14400 | > th | dose independent | rect. | 24 | 7 |
| 725 | 467.05 | temperature | 20.0 | 14400 | > th | dose independent | rect. | 24 | 3 |
| 729 | 467.07 | temperature | 20.0 | 14400 | < th | dose independent | rect. | 24 | 7 |
| 747 | 467.16 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 8 | 2 |
| 749 | 467.16 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 8 | 2 |
| 760 | 467.23 | temperature | 20.0 | 14400 | < th | dose independent | rect. | 4 | 3 |
| 762 | 467.25 | temperature | 20.0 | 14400 | < th | dose independent | rect. | 24 | 3 |
| 840 | 467.59 | temperature | 25.0 | 43200 | < th | dose independent | sin | 23 | NA |
| 863 | 467.68 | temperature | 25.0 | 43200 | > th | dose independent | sin | 0 | NA |
| 902 | 467.83 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 8 | 2 |
| 904 | 467.83 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 8 | 2 |
| 919 | 467.87 | temperature | 20.0 | 14400 | > th | dose dependent | rect. | 13 | 20 |