Os02g0265700
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Hypothetical protein.
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Os02g0265700 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 9.73 | 0.147 | 12.2 | 0.718 | 0.135 | -0.71 | 0.253 | 0.961 | 0.126 | 0.469 | 21.16 | 177 | -- | -- |
| 10.21 | 0.15 | 12.2 | 0.529 | 0.112 | -0.669 | -0.0872 | -- | 0.0785 | 4.21 | 21.5 | 215 | -- | -- |
| 9.93 | 0.147 | 12.2 | 0.694 | 0.128 | -0.712 | -- | 0.871 | 0.113 | 0.229 | 21.77 | 177 | -- | -- |
| 10.22 | 0.15 | 12.2 | 0.529 | 0.115 | -0.662 | -- | -- | 0.0783 | 3.94 | 21.35 | 172 | -- | -- |
| 10.34 | 0.15 | 12.2 | 0.658 | -- | -0.79 | -- | 0.63 | 0.127 | -- | 21.78 | 56 | -- | -- |
| 17.1 | 0.194 | 12.3 | 0.396 | 0.362 | -- | 0.152 | -- | -0.0321 | 2.88 | -- | -- | -- | -- |
| 17.18 | 0.194 | 12.3 | 0.392 | 0.363 | -- | -- | -- | -0.033 | 2.92 | -- | -- | -- | -- |
| 10.58 | 0.151 | 12.2 | 0.553 | -- | -0.765 | -- | -- | 0.094 | -- | 21.67 | 32 | -- | -- |
| 17.07 | 0.193 | 12.3 | -- | 0.184 | -0.496 | -- | -- | -0.00804 | 3.32 | 22.1 | 88 | -- | -- |
| 24.78 | 0.233 | 12.3 | 0.408 | -- | -- | -- | -- | -0.0236 | -- | -- | -- | -- | -- |
| 21.24 | 0.216 | 12.3 | -- | 0.371 | -- | -- | -- | -0.0767 | 2.92 | -- | -- | -- | -- |
| 18.31 | 0.199 | 12.2 | -- | -- | -0.653 | -- | -- | 0.00762 | -- | 23.1 | 30 | -- | -- |
| 29.17 | 0.252 | 12.3 | -- | -- | -- | -- | -- | -0.0689 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 9.84 | temperature | 20 | 90 | > th | dose dependent | rect. | 24 | 23 |
| 4 | 9.94 | temperature | 20 | 270 | > th | dose dependent | rect. | 3 | 23 |
| 6 | 9.96 | temperature | 20 | 270 | > th | dose dependent | no | NA | NA |
| 11 | 10.00 | temperature | 20 | 10 | > th | dose dependent | rect. | 24 | 23 |
| 22 | 10.08 | temperature | 20 | 270 | > th | dose dependent | rect. | 11 | 23 |
| 23 | 10.09 | temperature | 20 | 270 | > th | dose dependent | rect. | 9 | 23 |
| 49 | 10.30 | temperature | 20 | 720 | > th | dose dependent | rect. | 22 | 19 |
| 66 | 10.35 | temperature | 20 | 270 | > th | dose dependent | rect. | 17 | 23 |
| 95 | 10.46 | temperature | 10 | 30 | > th | dose dependent | no | NA | NA |
| 102 | 10.47 | temperature | 20 | 270 | > th | dose dependent | rect. | 15 | 23 |
| 131 | 10.55 | temperature | 20 | 720 | > th | dose dependent | sin | 3 | NA |
| 187 | 10.66 | temperature | 20 | 90 | > th | dose dependent | sin | 20 | NA |
| 262 | 10.76 | temperature | 30 | 270 | < th | dose dependent | sin | 22 | NA |
| 276 | 10.78 | temperature | 25 | 1440 | > th | dose independent | rect. | 16 | 6 |
| 329 | 10.83 | temperature | 30 | 270 | < th | dose dependent | rect. | 7 | 23 |
| 341 | 10.85 | temperature | 30 | 270 | < th | dose dependent | no | NA | NA |
| 356 | 10.86 | temperature | 30 | 270 | < th | dose dependent | rect. | 2 | 23 |
| 371 | 10.88 | temperature | 25 | 1440 | < th | dose independent | rect. | 16 | 6 |
| 373 | 10.88 | temperature | 30 | 720 | < th | dose dependent | rect. | 3 | 16 |
| 396 | 10.89 | temperature | 30 | 30 | < th | dose dependent | rect. | 19 | 23 |
| 412 | 10.90 | temperature | 30 | 270 | < th | dose dependent | rect. | 4 | 23 |
| 450 | 10.93 | temperature | 30 | 270 | < th | dose dependent | rect. | 19 | 23 |
| 455 | 10.94 | temperature | 30 | 720 | < th | dose dependent | rect. | 3 | 14 |
| 473 | 10.95 | temperature | 30 | 270 | < th | dose dependent | rect. | 17 | 23 |
| 493 | 10.96 | temperature | 30 | 270 | < th | dose dependent | rect. | 22 | 23 |
| 507 | 10.98 | temperature | 30 | 720 | < th | dose dependent | sin | 1 | NA |
| 509 | 10.98 | temperature | 20 | 1440 | > th | dose dependent | rect. | 11 | 13 |
| 523 | 10.99 | temperature | 20 | 1440 | > th | dose dependent | sin | 17 | NA |
| 533 | 10.99 | temperature | 20 | 1440 | > th | dose dependent | rect. | 11 | 18 |
| 550 | 11.00 | temperature | 20 | 1440 | > th | dose dependent | rect. | 15 | 8 |
| 552 | 11.00 | temperature | 20 | 1440 | > th | dose dependent | rect. | 13 | 11 |
| 577 | 11.01 | temperature | 20 | 1440 | > th | dose dependent | rect. | 20 | 1 |
| 604 | 11.02 | temperature | 20 | 1440 | > th | dose dependent | rect. | 13 | 16 |
| 654 | 11.04 | temperature | 30 | 30 | < th | dose dependent | no | NA | NA |
| 683 | 11.04 | temperature | 30 | 30 | < th | dose dependent | rect. | 11 | 23 |
| 684 | 11.04 | temperature | 30 | 30 | < th | dose dependent | rect. | 13 | 23 |
| 690 | 11.05 | temperature | 20 | 1440 | > th | dose dependent | rect. | 17 | 5 |
| 737 | 11.06 | temperature | 30 | 270 | < th | dose dependent | rect. | 10 | 23 |
| 755 | 11.07 | temperature | 30 | 720 | < th | dose dependent | rect. | 23 | 21 |
| 765 | 11.07 | temperature | 30 | 30 | < th | dose dependent | rect. | 17 | 23 |
| 792 | 11.08 | temperature | 30 | 30 | < th | dose dependent | rect. | 15 | 23 |
| 823 | 11.09 | temperature | 30 | 270 | < th | dose dependent | rect. | 15 | 23 |
| 870 | 11.11 | temperature | 30 | 720 | < th | dose dependent | rect. | 21 | 20 |
| 903 | 11.12 | temperature | 30 | 720 | < th | dose dependent | rect. | 19 | 21 |
| 982 | 11.15 | temperature | 25 | 1440 | > th | dose dependent | rect. | 11 | 7 |