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Os02g0260700

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Similar to GAMYB-binding protein (Fragment).


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 10.3 (0.014) R2 : 0.685
β1 : 0.833 (0.0512) R2dD : 0.19 R2D : 0.0636
β2 : 0.758 (0.0344) R2dC : 0.335 R2C : 0.298
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.512 (0.0298) R2dN8 : 0.273 R2N8 : 0.148
σ : 0.263
deviance : 31.46
__
_____
C
peak time of C : 2.73
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = humidity, response mode = < th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
27.37 0.246 10.3 0.893 0.784 -0.596 0.0619 0.384 0.546 2.78 79 1383 -- --
27.49 0.244 10.3 0.862 0.788 -0.574 0.0789 -- 0.539 2.77 78.98 1382 -- --
27.38 0.244 10.3 0.892 0.784 -0.594 -- 0.392 0.546 2.79 79 1382 -- --
27.51 0.244 10.3 0.86 0.787 -0.57 -- -- 0.538 2.78 79 1382 -- --
41.5 0.302 10.3 0.905 -- -0.458 -- -0.0323 0.514 -- 79 1382 -- --
31.46 0.263 10.3 0.833 0.758 -- -0.00128 -- 0.512 2.73 -- -- -- --
31.46 0.263 10.3 0.833 0.758 -- -- -- 0.512 2.73 -- -- -- --
41.51 0.301 10.3 0.906 -- -0.458 -- -- 0.514 -- 79 1382 -- --
45.38 0.314 10.3 -- 0.848 -0.537 -- -- 0.485 2.45 82 2528 -- --
64.88 0.376 10.3 0.865 -- -- -- -- 0.531 -- -- -- -- --
49.75 0.33 10.3 -- 0.774 -- -- -- 0.419 2.74 -- -- -- --
59.89 0.362 10.3 -- -- -0.467 -- -- 0.43 -- 82 2528 -- --
84.63 0.429 10.3 -- -- -- -- -- 0.435 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 26.54 humidity 50.0 720 > th dose dependent rect. 17 2
4 26.81 wind 1.0 14400 < th dose independent rect. 1 2
7 26.95 humidity 50.0 720 > th dose dependent rect. 17 4
8 26.97 wind 1.0 14400 > th dose independent rect. 1 2
14 27.17 radiation 1.0 720 < th dose dependent rect. 24 19
15 27.19 precipitation 0.1 14400 > th dose independent rect. 14 4
16 27.20 precipitation 0.1 14400 < th dose independent rect. 14 4
17 27.20 precipitation 0.1 14400 < th dose dependent rect. 14 4
18 27.23 humidity 80.0 1440 > th dose independent rect. 10 4
23 27.26 humidity 80.0 1440 > th dose dependent rect. 10 4
24 27.26 precipitation 0.1 14400 > th dose dependent rect. 13 5
25 27.27 wind 1.0 43200 < th dose independent rect. 5 2
27 27.27 humidity 80.0 1440 > th dose independent rect. 9 13
30 27.27 precipitation 0.1 14400 > th dose dependent rect. 12 7
34 27.28 precipitation 0.1 14400 < th dose independent rect. 12 6
35 27.28 humidity 80.0 1440 > th dose independent rect. 10 11
42 27.28 precipitation 0.1 14400 < th dose dependent rect. 12 6
46 27.30 humidity 80.0 1440 < th dose independent rect. 10 4
53 27.30 humidity 70.0 1440 > th dose dependent rect. 11 1
59 27.31 humidity 80.0 1440 < th dose independent rect. 8 14
65 27.32 humidity 80.0 1440 < th dose independent rect. 10 11
79 27.33 humidity 70.0 1440 > th dose dependent rect. 9 12
80 27.34 humidity 80.0 720 < th dose independent rect. 12 3
90 27.36 wind 1.0 14400 < th dose independent rect. 1 5
100 27.37 precipitation 0.1 720 < th dose independent rect. 5 19
103 27.37 precipitation 0.1 720 < th dose dependent rect. 5 19
116 27.39 humidity 80.0 720 > th dose independent rect. 8 20
118 27.39 radiation 1.0 720 < th dose dependent rect. 24 17
133 27.42 wind 1.0 43200 < th dose independent rect. 5 4
143 27.43 humidity 60.0 14400 > th dose independent rect. 16 17
151 27.43 humidity 50.0 720 > th dose dependent rect. 17 10
158 27.44 humidity 90.0 30 < th dose independent rect. 12 23
167 27.46 humidity 80.0 1440 > th dose independent sin 21 NA
183 27.47 humidity 80.0 1440 < th dose independent sin 21 NA
184 27.47 humidity 70.0 720 > th dose independent rect. 17 2
198 27.48 humidity 50.0 720 > th dose dependent rect. 15 13
212 27.49 precipitation 0.1 720 < th dose independent rect. 1 23
217 27.49 precipitation 0.1 720 < th dose dependent rect. 1 23
219 27.50 wind 1.0 43200 > th dose independent rect. 5 2
224 27.50 radiation 1.0 720 < th dose independent rect. 24 19
235 27.51 wind 1.0 43200 < th dose dependent rect. 12 1
243 27.52 humidity 80.0 720 < th dose independent rect. 12 10
253 27.52 precipitation 0.1 43200 > th dose dependent rect. 19 1
284 27.54 precipitation 0.1 720 < th dose independent rect. 3 23
287 27.54 precipitation 0.1 720 < th dose dependent rect. 3 23
300 27.55 humidity 80.0 1440 < th dose independent rect. 17 22
311 27.56 humidity 60.0 14400 < th dose independent rect. 16 18
348 27.58 wind 1.0 43200 < th dose dependent rect. 5 2
354 27.59 wind 1.0 10 > th dose independent rect. 4 1
355 27.59 humidity 70.0 1440 > th dose independent rect. 15 4
394 27.61 precipitation 0.1 720 < th dose independent rect. 3 14
398 27.61 precipitation 0.1 720 < th dose independent rect. 3 21
410 27.61 precipitation 0.1 720 < th dose dependent rect. 3 14
411 27.61 precipitation 0.1 720 < th dose dependent rect. 3 21
420 27.62 humidity 90.0 1440 < th dose dependent rect. 18 3
426 27.63 humidity 80.0 1440 < th dose independent no NA NA
436 27.63 humidity 80.0 1440 > th dose independent rect. 17 23
443 27.64 wind 1.0 43200 > th dose independent rect. 5 8
471 27.65 precipitation 0.1 14400 > th dose dependent sin 21 NA
477 27.65 radiation 10.0 720 < th dose dependent rect. 17 10
486 27.65 humidity 60.0 720 > th dose dependent rect. 9 19
487 27.66 wind 1.0 14400 > th dose independent rect. 1 5
495 27.66 humidity 80.0 1440 < th dose independent rect. 13 23
497 27.66 wind 1.0 10 > th dose dependent rect. 4 1
510 27.67 humidity 70.0 1440 > th dose dependent sin 21 NA
520 27.68 humidity 80.0 1440 > th dose independent no NA NA
521 27.68 wind 1.0 43200 > th dose independent rect. 5 4
541 27.69 precipitation 0.1 720 < th dose independent rect. 19 22
554 27.69 precipitation 0.1 720 < th dose dependent rect. 19 22
556 27.70 humidity 60.0 14400 > th dose independent rect. 16 2
559 27.70 humidity 70.0 1440 > th dose independent rect. 14 16
564 27.70 radiation 10.0 720 < th dose dependent rect. 17 2
577 27.71 humidity 60.0 14400 < th dose independent sin 11 NA
584 27.71 humidity 70.0 1440 > th dose independent rect. 14 12
607 27.72 precipitation 0.1 720 < th dose independent rect. 12 19
612 27.72 humidity 80.0 1440 > th dose independent rect. 13 23
613 27.72 humidity 60.0 14400 < th dose dependent sin 11 NA
615 27.72 wind 1.0 14400 < th dose dependent rect. 1 3
618 27.72 humidity 90.0 720 < th dose dependent rect. 12 12
619 27.72 humidity 90.0 720 > th dose dependent rect. 8 14
621 27.72 precipitation 0.1 720 < th dose dependent rect. 12 19
636 27.73 humidity 90.0 1440 < th dose dependent rect. 10 11
676 27.75 humidity 70.0 1440 > th dose independent rect. 14 19
696 27.76 humidity 50.0 43200 < th dose independent rect. 14 1
719 27.77 radiation 1.0 720 > th dose independent rect. 12 19
720 27.77 humidity 90.0 720 < th dose dependent rect. 12 3
733 27.77 humidity 60.0 14400 < th dose dependent rect. 15 20
754 27.79 humidity 70.0 1440 > th dose independent sin 15 NA
780 27.80 humidity 60.0 14400 > th dose independent sin 11 NA
782 27.80 humidity 60.0 14400 > th dose independent rect. 16 4
808 27.80 radiation 1.0 10 > th dose independent rect. 12 23
838 27.81 precipitation 0.1 720 < th dose independent rect. 12 14
856 27.81 precipitation 0.1 720 < th dose dependent rect. 12 14
860 27.81 humidity 60.0 720 > th dose dependent rect. 24 21
862 27.82 humidity 50.0 43200 > th dose independent rect. 14 1
895 27.83 humidity 80.0 1440 < th dose independent rect. 17 3
951 27.84 radiation 40.0 30 < th dose dependent rect. 11 18