BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os02g0260700 Os02g0260700|AK100835
(558 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT3G61600.1 | chr3:22795704-22797953 FORWARD LENGTH=562 646 0.0
AT2G46260.1 | chr2:18996111-18998463 FORWARD LENGTH=562 632 0.0
AT4G01160.1 | chr4:494976-497006 REVERSE LENGTH=506 463 e-130
AT2G30600.5 | chr2:13037410-13041475 FORWARD LENGTH=856 53 5e-07
>AT3G61600.1 | chr3:22795704-22797953 FORWARD LENGTH=562
Length = 561
Score = 646 bits (1666), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 325/557 (58%), Positives = 403/557 (72%), Gaps = 27/557 (4%)
Query: 14 MDPDFSXXXXXXPS-FEFAFNSVNFSDRVLRIEVVAGXXXXXXXHAPGSSRDG--GAGSL 70
MDPDF+ F FAFN NFSDR+LRIE++ G P SR G S+
Sbjct: 17 MDPDFTRHGSSSDGDFGFAFNDSNFSDRLLRIEIMGG---------PSDSRSEVEGCTSI 67
Query: 71 SDWARHXXXXXXXXXXXXXSEAVMPDQINCKVEPEECDAYEE--------NQEEPVAXXX 122
+DWARH S + D + C PEE +E E P
Sbjct: 68 ADWARHRKRRREDIKKE--SGVTISDIVAC---PEEQILTDEQPDMDGCPGGENPDDEGG 122
Query: 123 XXXXXXXXXXXXXXXXXXXXXXXVSTPVLRVKNIYISSAILAAKSPFFFKLFSNGMKESD 182
+ V+RVK ++ISS ILAAKSPFF+KLFSNGM+ES+
Sbjct: 123 EAMVEEALSGDEEETSSEPNWGMDCSTVVRVKELHISSPILAAKSPFFYKLFSNGMRESE 182
Query: 183 ERQATLRITDSEENALMELLSFMYSGKLTSTDPTLLLDILMAADKFEVISCMRYCSQLLT 242
+R TLRI SEE ALMELL+FMYS ++ T LLD+LMAADKFEV SCMRYCS+LL
Sbjct: 183 QRHVTLRINASEEAALMELLNFMYSNAVSVTTAPALLDVLMAADKFEVASCMRYCSRLLR 242
Query: 243 SLTMTTESALLYLDLPCSISMAAAVQPLTDAAKEYLSNKYKDLTKFQDEVMNIPLAGIEA 302
++ MT ESALLYL+LP S+ MA AVQPLTDAAK++L+ +YKD+TKF +EVM++PLAGIEA
Sbjct: 243 NMPMTPESALLYLELPSSVLMAKAVQPLTDAAKQFLAARYKDITKFHEEVMSLPLAGIEA 302
Query: 303 ILSSNDLQVASEDAIYDFLIRWARAQYPKSEERREILSSRLLPLVRFSHMTCRKLRKVLI 362
ILSS++LQ+ASEDA+YDF+++WARAQYP EERREIL SRL +RF MTCRKL+KVL
Sbjct: 303 ILSSDELQIASEDAVYDFILKWARAQYPCLEERREILGSRLALSIRFPFMTCRKLKKVLT 362
Query: 363 CTDLDHEQATKCVTEALLYKADAPHRQRALAADVTTC--QKFAERAYKYRPLKVVEFDRP 420
C+D +HE A+K V EAL +KA+APHRQR+LA++ + ++ ERAYKYRP+KVVEF+ P
Sbjct: 363 CSDFEHEIASKLVLEALFFKAEAPHRQRSLASEESASLNRRLIERAYKYRPVKVVEFELP 422
Query: 421 YPQCIAYLDLKREECSRLFPSGRMYSQAFHLAGQGFFLSAHCNMEQQSTFYCFGLFLGMQ 480
PQC+ YLDLKREEC LFPSGR+YSQAFHL GQGFFLSAHCNM+QQS+F+CFGLFLGMQ
Sbjct: 423 RPQCVVYLDLKREECGGLFPSGRVYSQAFHLGGQGFFLSAHCNMDQQSSFHCFGLFLGMQ 482
Query: 481 EKGSMSVTVDYEFAARTRPSGEFVSKYKGNYTFTGGKAVGYRNLFAIPWSTFMADDSLFF 540
EKGS+S VDYEF+AR++P+ +F+SKYKGNYTFTGGKAVGYRNLF +PW++F+A+DS +F
Sbjct: 483 EKGSVSFGVDYEFSARSKPAEDFISKYKGNYTFTGGKAVGYRNLFGVPWTSFIAEDSQYF 542
Query: 541 LDGVLHLRAELTIKQPT 557
++G+LHLRAELTIK+ T
Sbjct: 543 INGILHLRAELTIKRST 559
>AT2G46260.1 | chr2:18996111-18998463 FORWARD LENGTH=562
Length = 561
Score = 632 bits (1630), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 319/554 (57%), Positives = 398/554 (71%), Gaps = 21/554 (3%)
Query: 14 MDPDFSXXXXXXPS-FEFAFNSVNFSDRVLRIEVVAGXXXXXXXHAPGSSRDGGAG--SL 70
MD +FS F FAFN NFSDR+LRIE++ G P SR G S+
Sbjct: 16 MDSNFSRHGSSSEGDFGFAFNDSNFSDRLLRIEILGG---------PSDSRSDAEGCTSI 66
Query: 71 SDWARHXXXXXXXXXXXXXSEAVMPDQINCKVEPEECDAYEENQEEPVAXXXXXXXXXXX 130
+DWARH + + D + C E D + + ++
Sbjct: 67 ADWARHRKRRREDNKKD--NGVAISDIVACAEEQILTDNNQPDMDDAPGGDNLDDEGEAM 124
Query: 131 XXXXXXXXXXXXXX----XVSTPVLRVKNIYISSAILAAKSPFFFKLFSNGMKESDERQA 186
+ V+RVK ++ISS ILAAKSPFF+KLFSNGM+ES++R
Sbjct: 125 VEEALSGDDDASSEPNWGIDCSTVVRVKELHISSPILAAKSPFFYKLFSNGMRESEQRHV 184
Query: 187 TLRITDSEENALMELLSFMYSGKLTSTDPTLLLDILMAADKFEVISCMRYCSQLLTSLTM 246
TLRI+ EE ALMELL+FMYS L+ T LLD+LMAADKFEV SCMRYCS+LL ++ M
Sbjct: 185 TLRISAQEEGALMELLNFMYSNSLSVTTAPALLDVLMAADKFEVASCMRYCSRLLRNMPM 244
Query: 247 TTESALLYLDLPCSISMAAAVQPLTDAAKEYLSNKYKDLTKFQDEVMNIPLAGIEAILSS 306
T +SALLYL+LP S+ MA AVQPLTDAAK++L+++YKD+TKF DEVM +PLAGIEAILSS
Sbjct: 245 TPDSALLYLELPSSVLMAEAVQPLTDAAKQFLASRYKDITKFHDEVMALPLAGIEAILSS 304
Query: 307 NDLQVASEDAIYDFLIRWARAQYPKSEERREILSSRLLPLVRFSHMTCRKLRKVLICTDL 366
+DLQ+ASEDA+YDF+++WAR QY E+RREIL SRL +RF +MTCRKL+KVL C+D
Sbjct: 305 DDLQIASEDAVYDFVLKWARGQYSSLEDRREILGSRLALYIRFPYMTCRKLKKVLTCSDF 364
Query: 367 DHEQATKCVTEALLYKADAPHRQRALAADVTTC--QKFAERAYKYRPLKVVEFDRPYPQC 424
+HE A+K V EAL +KA+APHRQR LAA+ + ++F ERAYKYRP+KVVEF+ P PQC
Sbjct: 365 EHEVASKQVLEALFFKAEAPHRQRILAAEGSDSMNRRFIERAYKYRPVKVVEFELPRPQC 424
Query: 425 IAYLDLKREECSRLFPSGRMYSQAFHLAGQGFFLSAHCNMEQQSTFYCFGLFLGMQEKGS 484
+ YLDLKREEC+ LFPSGR+YSQAFHL GQGFFLSAHCNM+QQS+F+CFGLFLGMQEKG+
Sbjct: 425 VVYLDLKREECAGLFPSGRVYSQAFHLGGQGFFLSAHCNMDQQSSFHCFGLFLGMQEKGA 484
Query: 485 MSVTVDYEFAARTRPSG-EFVSKYKGNYTFTGGKAVGYRNLFAIPWSTFMADDSLFFLDG 543
+S VDYEFAAR + + E+VSKYKGNYTFTGGKAVGYRNLF IPW++F+A+DS F++G
Sbjct: 485 VSFGVDYEFAARDKSTKEEYVSKYKGNYTFTGGKAVGYRNLFGIPWTSFIAEDSQHFING 544
Query: 544 VLHLRAELTIKQPT 557
+LHLRAELTIK+ +
Sbjct: 545 ILHLRAELTIKRSS 558
>AT4G01160.1 | chr4:494976-497006 REVERSE LENGTH=506
Length = 505
Score = 463 bits (1192), Expect = e-130, Method: Compositional matrix adjust.
Identities = 251/535 (46%), Positives = 344/535 (64%), Gaps = 48/535 (8%)
Query: 28 FEFAFNSVNFSDRVLRIEVVAGXXXXXXXHAPGSSRDGGA--GSLSDWARHXXXXXXXXX 85
F FAFN+VNFSDR+LRIE+ SS +G S+ DWAR
Sbjct: 10 FRFAFNNVNFSDRLLRIEITQ------------SSGEGEVICSSIVDWARDRKRRREDIV 57
Query: 86 XXXXSEAVMPDQINCKVEPEECDAYEENQEEPVAXXXXXXXXXXXXXXXXXXXXXXXXXX 145
+ Q+ +E + E++ E +
Sbjct: 58 NENSNNKT---QVLVTAAEQEPKSGGEDENERLTNN------------------------ 90
Query: 146 VSTPVLRVKNIYISSAILAAKSPFFFKLFSNGMKESDERQATLRITDSEENALMELLSFM 205
+T VL V+ ++ISSAILAAKSPFF+KLFSNGM ES+++Q TL+I SEE A+MELL FM
Sbjct: 91 -NTSVLSVQELHISSAILAAKSPFFYKLFSNGMLESEQKQMTLKIDASEETAVMELLKFM 149
Query: 206 YSGKLTSTDPTLLLDILMAADKFEVISCMRYCSQLLTSLTMTTESALLYLDLPCSISMAA 265
YS L+ T + LLD+LM ADKFEV SCM+YCSQLL + MT ES+LL LDLP S+ MA
Sbjct: 150 YSNSLSVTASSALLDVLMVADKFEVASCMKYCSQLLLKMPMTLESSLLLLDLPSSLLMAD 209
Query: 266 AVQPLTDAAKEYLSNKYKDLTKF-QDEVMNIPLAGIEAILSSNDLQVASEDAIYDFLIRW 324
+V+PLT+AA+++++++YK+++K +E+M +PL GIEAIL+S+ L++ SED +Y+ +++W
Sbjct: 210 SVKPLTNAARQFIASRYKNMSKITMEELMALPLVGIEAILASDGLEIQSEDVVYEVVLKW 269
Query: 325 ARAQYPKSEERREILSSRLLPLVRFSHMTCRKLRKVLICTDLDHEQATKCVTEALLYKAD 384
++ Y E R+E+L S L +RF HMT +L+K+L D A+K V EAL +K +
Sbjct: 270 VKSHYSVLEARQEVLGSHLARYIRFPHMTTDRLKKILTSNDFRPSVASKLVVEALFFKTE 329
Query: 385 APHRQRALAAD---VTTCQKFAERAYKYRPLKVVEFDRPYPQCIAYLDLKREECSRLFPS 441
+ Q L A +T ++FA+RAY +RP+K+VEF P PQCI YLDLKR+EC ++PS
Sbjct: 330 SLAHQHVLLAHEQPASTSRRFAKRAYVHRPIKIVEFAVPRPQCIIYLDLKRKECESIYPS 389
Query: 442 GRMYSQAFHLAGQGFFLSAHCNMEQQSTFYCFGLFLGMQEKG--SMSVTVDYEFAARTRP 499
R+ SQ F L GQGFFLSA CNM+ +CFGLF+GMQE G S SVTVDY+F+ R++P
Sbjct: 390 SRISSQQFTLGGQGFFLSAQCNMDHLCLIHCFGLFIGMQENGSASASVTVDYDFSVRSKP 449
Query: 500 SGEFVSKYKGNYTFTGGKAVGYRNLFAIPWSTFMADDSLFFLDGVLHLRAELTIK 554
+ EFV K+KG YTFT GKAVG RNL IPW F A + +F++ VLHLRA+L+I+
Sbjct: 450 TMEFVGKFKGIYTFTRGKAVGCRNLLGIPWDIFTAKNCPYFINDVLHLRADLSIR 504
>AT2G30600.5 | chr2:13037410-13041475 FORWARD LENGTH=856
Length = 855
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 31/85 (36%), Positives = 48/85 (56%), Gaps = 6/85 (7%)
Query: 161 AILAAKSPFFFKLFSNGMKESDERQATLRITDSEENALMELLSFMYSGKLTSTDP----T 216
IL+ S F K+F+NGM ES +T+ +TD A +++FMYSG+L D T
Sbjct: 369 VILSLWSVAFAKMFTNGMSES--HSSTIYLTDVSPEAFKAMMNFMYSGELNMEDTVNFGT 426
Query: 217 LLLDILMAADKFEVISCMRYCSQLL 241
L+ +L AD+F V+ + C ++L
Sbjct: 427 ELIHLLFLADRFGVVPLHQECCKML 451
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.321 0.134 0.393
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 10,173,657
Number of extensions: 381982
Number of successful extensions: 749
Number of sequences better than 1.0e-05: 4
Number of HSP's gapped: 745
Number of HSP's successfully gapped: 5
Length of query: 558
Length of database: 11,106,569
Length adjustment: 104
Effective length of query: 454
Effective length of database: 8,255,305
Effective search space: 3747908470
Effective search space used: 3747908470
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 114 (48.5 bits)