Os02g0260500
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os02g0260500 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 69.91 | 0.393 | 7.58 | 1.77 | 0.561 | -0.745 | -0.0646 | 1.98 | 0.402 | 17.4 | 12.65 | 1032 | -- | -- |
| 73.16 | 0.398 | 7.63 | 1.36 | 0.534 | -0.658 | -0.0811 | -- | 0.297 | 17.1 | 12.67 | 1180 | -- | -- |
| 69.91 | 0.389 | 7.58 | 1.78 | 0.548 | -0.74 | -- | 1.97 | 0.404 | 17.3 | 12.46 | 1085 | -- | -- |
| 73.17 | 0.398 | 7.63 | 1.37 | 0.535 | -0.711 | -- | -- | 0.299 | 17.2 | 13.94 | 1146 | -- | -- |
| 84.74 | 0.429 | 7.57 | 1.78 | -- | -0.83 | -- | 1.87 | 0.41 | -- | 13.82 | 1194 | -- | -- |
| 80.85 | 0.422 | 7.66 | 1.16 | 0.578 | -- | -0.277 | -- | 0.176 | 16.6 | -- | -- | -- | -- |
| 81.05 | 0.422 | 7.66 | 1.16 | 0.577 | -- | -- | -- | 0.174 | 16.7 | -- | -- | -- | -- |
| 87.68 | 0.436 | 7.62 | 1.38 | -- | -0.805 | -- | -- | 0.305 | -- | 8.596 | 1221 | -- | -- |
| 115.92 | 0.501 | 7.68 | -- | 0.609 | -0.201 | -- | -- | 0.0703 | 16.8 | 9.347 | 420 | -- | -- |
| 98.73 | 0.464 | 7.65 | 1.14 | -- | -- | -- | -- | 0.159 | -- | -- | -- | -- | -- |
| 116.41 | 0.505 | 7.69 | -- | 0.556 | -- | -- | -- | 0.0454 | 16.7 | -- | -- | -- | -- |
| 129.19 | 0.529 | 7.7 | -- | -- | 0.408 | -- | -- | -0.0211 | -- | 17.9 | 82 | -- | -- |
| 132.79 | 0.538 | 7.68 | -- | -- | -- | -- | -- | 0.0333 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 63.51 | temperature | 10.0 | 10 | > th | dose dependent | rect. | 12 | 10 |
| 5 | 64.27 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 5 | 18 |
| 6 | 64.78 | temperature | 10.0 | 30 | > th | dose dependent | rect. | 12 | 18 |
| 14 | 65.58 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 9 | 11 |
| 17 | 65.80 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 1 | 16 |
| 20 | 65.90 | temperature | 20.0 | 270 | > th | dose dependent | rect. | 1 | 17 |
| 27 | 66.19 | temperature | 20.0 | 30 | > th | dose independent | rect. | 12 | 10 |
| 49 | 66.64 | temperature | 15.0 | 30 | > th | dose dependent | rect. | 12 | 8 |
| 53 | 66.72 | temperature | 15.0 | 30 | > th | dose independent | rect. | 12 | 18 |
| 57 | 66.81 | atmosphere | 1010.0 | 30 | < th | dose independent | rect. | 12 | 18 |
| 61 | 66.83 | radiation | 40.0 | 4320 | < th | dose dependent | rect. | 18 | 10 |
| 65 | 66.86 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 5 | 6 |
| 72 | 66.96 | atmosphere | 995.0 | 30 | > th | dose independent | rect. | 12 | 18 |
| 75 | 66.99 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 5 | 8 |
| 77 | 67.00 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 5 | 10 |
| 83 | 67.04 | temperature | 20.0 | 720 | > th | dose dependent | rect. | 1 | 12 |
| 96 | 67.18 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 1 | 12 |
| 99 | 67.24 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 7 | 6 |
| 102 | 67.24 | atmosphere | 995.0 | 1440 | > th | dose independent | rect. | 7 | 6 |
| 103 | 67.24 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 13 | 18 |
| 107 | 67.28 | precipitation | 0.1 | 30 | < th | dose independent | rect. | 12 | 18 |
| 108 | 67.28 | precipitation | 0.1 | 30 | < th | dose dependent | rect. | 12 | 18 |
| 109 | 67.31 | temperature | 10.0 | 30 | > th | dose independent | rect. | 6 | 6 |
| 111 | 67.31 | atmosphere | 995.0 | 30 | > th | dose independent | rect. | 6 | 6 |
| 112 | 67.31 | atmosphere | 1015.0 | 30 | < th | dose independent | rect. | 6 | 6 |
| 116 | 67.32 | precipitation | 0.1 | 30 | < th | dose independent | rect. | 6 | 6 |
| 117 | 67.32 | precipitation | 0.1 | 30 | < th | dose dependent | rect. | 6 | 6 |
| 122 | 67.36 | wind | 1.0 | 30 | > th | dose independent | rect. | 6 | 6 |
| 142 | 67.49 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 9 | 21 |
| 154 | 67.55 | atmosphere | 995.0 | 10 | > th | dose independent | rect. | 12 | 10 |
| 165 | 67.62 | atmosphere | 1010.0 | 10 | < th | dose independent | rect. | 12 | 10 |
| 166 | 67.63 | wind | 1.0 | 30 | > th | dose independent | rect. | 12 | 10 |
| 171 | 67.72 | radiation | 1.0 | 10 | > th | dose independent | rect. | 6 | 6 |
| 175 | 67.74 | radiation | 40.0 | 4320 | < th | dose dependent | rect. | 18 | 8 |
| 177 | 67.76 | wind | 9.0 | 30 | < th | dose independent | rect. | 12 | 18 |
| 182 | 67.78 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 7 | 2 |
| 187 | 67.81 | precipitation | 0.1 | 10 | < th | dose independent | rect. | 12 | 10 |
| 188 | 67.81 | precipitation | 0.1 | 10 | < th | dose dependent | rect. | 12 | 10 |
| 189 | 67.83 | temperature | 10.0 | 10 | > th | dose independent | rect. | 12 | 10 |
| 192 | 67.83 | temperature | 10.0 | 10 | > th | dose independent | rect. | 22 | 14 |
| 193 | 67.83 | atmosphere | 995.0 | 10 | > th | dose independent | rect. | 22 | 14 |
| 195 | 67.84 | wind | 9.0 | 30 | < th | dose independent | rect. | 6 | 6 |
| 198 | 67.87 | temperature | 20.0 | 270 | > th | dose dependent | sin | 0 | NA |
| 210 | 67.92 | temperature | 30.0 | 30 | < th | dose dependent | rect. | 6 | 21 |
| 213 | 67.95 | temperature | 20.0 | 30 | > th | dose independent | rect. | 12 | 8 |
| 222 | 67.97 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 10 | 19 |
| 227 | 67.99 | temperature | 30.0 | 270 | < th | dose independent | rect. | 5 | 19 |
| 238 | 68.04 | humidity | 50.0 | 30 | > th | dose independent | rect. | 6 | 6 |
| 240 | 68.05 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 13 | 10 |
| 243 | 68.05 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 23 | 14 |
| 246 | 68.05 | atmosphere | 995.0 | 1440 | > th | dose independent | rect. | 23 | 14 |
| 270 | 68.15 | temperature | 15.0 | 720 | > th | dose dependent | rect. | 18 | 19 |
| 272 | 68.16 | temperature | 20.0 | 720 | > th | dose dependent | sin | 5 | NA |
| 274 | 68.17 | precipitation | 0.1 | 30 | < th | dose independent | rect. | 22 | 14 |
| 276 | 68.17 | precipitation | 0.1 | 30 | < th | dose dependent | rect. | 22 | 14 |
| 315 | 68.37 | temperature | 30.0 | 270 | < th | dose dependent | sin | 22 | NA |
| 320 | 68.38 | wind | 1.0 | 30 | > th | dose dependent | rect. | 12 | 10 |
| 323 | 68.40 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 24 | 5 |
| 324 | 68.40 | wind | 9.0 | 30 | < th | dose independent | rect. | 12 | 10 |
| 325 | 68.40 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 24 | 5 |
| 334 | 68.44 | wind | 9.0 | 10 | < th | dose independent | rect. | 22 | 14 |
| 342 | 68.46 | wind | 9.0 | 270 | < th | dose independent | rect. | 5 | 19 |
| 343 | 68.46 | temperature | 30.0 | 720 | < th | dose dependent | rect. | 21 | 19 |
| 345 | 68.48 | humidity | 50.0 | 30 | > th | dose independent | rect. | 22 | 14 |
| 354 | 68.53 | atmosphere | 1010.0 | 270 | < th | dose independent | rect. | 24 | 5 |
| 355 | 68.54 | temperature | 10.0 | 270 | > th | dose independent | rect. | 24 | 5 |
| 357 | 68.54 | temperature | 30.0 | 270 | < th | dose independent | rect. | 24 | 5 |
| 358 | 68.54 | humidity | 50.0 | 270 | > th | dose independent | rect. | 24 | 5 |
| 361 | 68.54 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 24 | 5 |
| 363 | 68.54 | radiation | 20.0 | 270 | < th | dose independent | rect. | 24 | 5 |
| 366 | 68.54 | temperature | 10.0 | 270 | > th | dose independent | rect. | 5 | 19 |
| 369 | 68.55 | wind | 9.0 | 270 | < th | dose independent | rect. | 24 | 5 |
| 371 | 68.55 | radiation | 20.0 | 270 | < th | dose dependent | rect. | 24 | 5 |
| 378 | 68.55 | atmosphere | 1015.0 | 30 | < th | dose dependent | rect. | 12 | 18 |
| 380 | 68.56 | radiation | 1.0 | 270 | < th | dose independent | rect. | 24 | 5 |
| 399 | 68.60 | temperature | 30.0 | 10 | < th | dose independent | rect. | 6 | 21 |
| 458 | 68.72 | temperature | 30.0 | 270 | < th | dose independent | rect. | 5 | 7 |
| 459 | 68.72 | humidity | 50.0 | 30 | > th | dose independent | rect. | 12 | 18 |
| 460 | 68.72 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 5 | 19 |
| 462 | 68.72 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 5 | 19 |
| 463 | 68.73 | radiation | 1.0 | 4320 | > th | dose independent | rect. | 18 | 11 |
| 464 | 68.73 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 1 | 4 |
| 487 | 68.78 | wind | 7.0 | 270 | < th | dose independent | rect. | 15 | 10 |
| 491 | 68.79 | wind | 1.0 | 270 | > th | dose independent | rect. | 5 | 19 |
| 496 | 68.80 | wind | 1.0 | 270 | > th | dose independent | rect. | 1 | 3 |
| 503 | 68.81 | temperature | 20.0 | 30 | > th | dose dependent | rect. | 12 | 6 |
| 518 | 68.85 | temperature | 30.0 | 10 | < th | dose independent | rect. | 6 | 19 |
| 533 | 68.89 | temperature | 30.0 | 30 | < th | dose independent | rect. | 6 | 6 |
| 580 | 68.96 | humidity | 50.0 | 270 | > th | dose dependent | rect. | 24 | 5 |
| 593 | 68.99 | temperature | 30.0 | 720 | < th | dose dependent | rect. | 20 | 14 |
| 594 | 68.99 | temperature | 10.0 | 30 | > th | dose dependent | rect. | 3 | 15 |
| 602 | 69.01 | wind | 1.0 | 270 | > th | dose independent | rect. | 4 | 21 |
| 661 | 69.13 | temperature | 10.0 | 30 | > th | dose dependent | rect. | 3 | 19 |
| 666 | 69.15 | atmosphere | 1010.0 | 270 | < th | dose independent | rect. | 10 | 10 |
| 691 | 69.17 | temperature | 10.0 | 30 | > th | dose dependent | rect. | 1 | 21 |
| 701 | 69.18 | temperature | 10.0 | 30 | > th | dose dependent | rect. | 3 | 17 |
| 724 | 69.22 | radiation | 1.0 | 4320 | > th | dose independent | rect. | 18 | 1 |
| 748 | 69.24 | radiation | 1.0 | 4320 | < th | dose independent | rect. | 18 | 11 |
| 776 | 69.28 | wind | 1.0 | 270 | > th | dose independent | rect. | 24 | 5 |
| 789 | 69.30 | wind | 1.0 | 30 | > th | dose independent | rect. | 22 | 14 |
| 853 | 69.39 | temperature | 30.0 | 10 | < th | dose independent | rect. | 22 | 14 |
| 887 | 69.44 | wind | 5.0 | 90 | < th | dose independent | rect. | 6 | 21 |
| 904 | 69.45 | atmosphere | 1015.0 | 270 | < th | dose dependent | rect. | 24 | 5 |
| 913 | 69.46 | atmosphere | 995.0 | 30 | > th | dose dependent | rect. | 18 | 9 |
| 978 | 69.55 | humidity | 50.0 | 270 | > th | dose independent | rect. | 5 | 19 |
| 986 | 69.56 | temperature | 30.0 | 720 | < th | dose dependent | sin | 8 | NA |