BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os02g0260500 Os02g0260500|Os02g0260500
(711 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G41620.1 | chr5:16646330-16648776 FORWARD LENGTH=624 208 8e-54
AT1G64180.1 | chr1:23821640-23824193 FORWARD LENGTH=594 169 5e-42
AT3G11590.1 | chr3:3660628-3663537 FORWARD LENGTH=623 103 4e-22
AT2G46250.1 | chr2:18991386-18993201 FORWARD LENGTH=469 94 4e-19
AT3G20350.1 | chr3:7096602-7099372 FORWARD LENGTH=674 72 1e-12
AT1G50660.1 | chr1:18771386-18774385 FORWARD LENGTH=726 69 8e-12
AT5G22310.1 | chr5:7383742-7385345 REVERSE LENGTH=482 52 1e-06
>AT5G41620.1 | chr5:16646330-16648776 FORWARD LENGTH=624
Length = 623
Score = 208 bits (530), Expect = 8e-54, Method: Compositional matrix adjust.
Identities = 128/342 (37%), Positives = 187/342 (54%), Gaps = 20/342 (5%)
Query: 173 SGGFGRHIADSSTNHQKLNQARNCTAQPFSPGSYRSSVGDSSINQAISPARSLDIKGR-F 231
+G R I H + N QP SP SY SS+ ++ N+A++P+ SL+ +GR
Sbjct: 127 AGSLRRQIGQMLIKHHQSIDRNNHALQPVSPASYGSSLEVTTYNKAVTPSSSLEFRGRPS 186
Query: 232 RGADYNLKTSTELLKVLNRIWSLEEQHTADMSAINGLKLELQHAQEHIQELKCERRGYRH 291
R YNLKTSTELLKVLNRIWSLEEQH +++S I LK E+ H++ I+EL ++ RH
Sbjct: 187 REPHYNLKTSTELLKVLNRIWSLEEQHVSNISLIKALKTEVAHSRVRIKELLRYQQADRH 246
Query: 292 DVASLVRQLSEDKLVRKNKDKEKIAADIHXXXXXXXXXXXXXXXXXXXXXKFGKELSEIK 351
++ S+V+QL+E+KL+ KNK+ E++++ + K +ELSE+K
Sbjct: 247 ELDSVVKQLAEEKLLSKNKEVERMSSAVQSVRKALEDERKLRKRSESLHRKMARELSEVK 306
Query: 352 SAFVKAVXXXXXXXXXXXXXXXXCDQFAMGIRDYEEEVRALKQRHVNYEYQ----FDKSV 407
S+ V CD+FA GI+ YEEE+ LK+++++ ++ D+ V
Sbjct: 307 SSLSNCVKELERGSKSNKMMELLCDEFAKGIKSYEEEIHGLKKKNLDKDWAGRGGGDQLV 366
Query: 408 LHVSEAWLDERMQMQNTDVKEDSLKKSTITERLRSEIEAFLLAKRSVSFKNNDNYMHDSR 467
LH++E+WLDERMQM+ + K ++ ++L EIE FL KR+ +N
Sbjct: 367 LHIAESWLDERMQMRLEGGDTLNGKNRSVLDKLEVEIETFLQEKRNEIPRN--------- 417
Query: 468 PNARLRRQSLESVHFNGATSAPQLAEXXXXXSVASDLHCFEL 509
RR SLESV FN SAP S SD +CFEL
Sbjct: 418 -----RRNSLESVPFN-TLSAPPRDVDCEEDSGGSDSNCFEL 453
>AT1G64180.1 | chr1:23821640-23824193 FORWARD LENGTH=594
Length = 593
Score = 169 bits (428), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 165/541 (30%), Positives = 239/541 (44%), Gaps = 93/541 (17%)
Query: 171 KNSGGFGRHIADSSTNHQKLNQARNCTAQPFSPGSYRSSVGDSSINQAISPARSLDIKGR 230
+++G R I H L + + QP SP SY SS L+ +GR
Sbjct: 131 ESAGSIRRQIGQMLMKHHHLTERNDHALQPVSPTSYDSS---------------LEFRGR 175
Query: 231 FRGAD--YNLKTSTELLKVLNRIWSLEEQHTADMSAINGLKLELQHAQEHIQELKCERRG 288
R + N+KTSTELLKVLNRIW LEEQH+A++S I LK EL H++ I++L ++
Sbjct: 176 RRAGEPNNNIKTSTELLKVLNRIWILEEQHSANISLIKSLKTELAHSRARIKDLLRCKQA 235
Query: 289 YRHDVASLVRQLSEDKLVRKNKDKEKIAADIHXXXXXXXXXXXXXXXXXXXXXKFGKELS 348
+ D+ V+QL+E+KL + K+ +++++ + K +ELS
Sbjct: 236 DKRDMDDFVKQLAEEKLSKGTKEHDRLSSAVQ----SLEDERKLRKRSESLYRKLAQELS 291
Query: 349 EIKSAFVKAVXXXXXXXXXXXXXXXXCDQFAMGIRDYEEEVRALKQR-HVNYE--YQFDK 405
E+KS V CD+FA GI+ YE E+ LKQ+ N++ + D
Sbjct: 292 EVKSTLSNCVKEMERGTESKKILERLCDEFAKGIKSYEREIHGLKQKLDKNWKGWDEQDH 351
Query: 406 SVLHVSEAWLDERMQMQNTDVKEDSLKKSTITERLRSEIEAFLLAKRSVSFKNNDNYMHD 465
+L ++E+WLDER+Q N + E+L EIE FL K N N D
Sbjct: 352 MILCIAESWLDERIQSGN----------GSALEKLEFEIETFL--------KTNQNA--D 391
Query: 466 SRPNARLRRQSLESVHFNGATSAP--QLAEXXXXXSVASDLHCFELNMHGSSIQMH---D 520
S AR RR SLESV FN A SAP ++ S S +CFEL HGS + D
Sbjct: 392 SNEIARNRRTSLESVPFN-AMSAPIWEVDREEEEDSGGSGSNCFELKKHGSDVAKPPRGD 450
Query: 521 HT-GPRRSYTGNMDAPKRRTEYSHSVVGESSHMSDVQIYSQCNKARSSSSRPWHATRTQE 579
T P G + P+RR++ S+ V+ Q A SS+ + TR E
Sbjct: 451 ETEKPELIKVGVSERPQRRSQSPSSL--------QVKFEDQMAWAMSSNEK--KKTRANE 500
Query: 580 IDSQASARTVPADEQNEIPCPHISQGYHNGTTSKNNLGAHADCLGQESLDHYSRASLFCD 639
++ P E+ C G + N +G E + + R S
Sbjct: 501 ME--------PETEK----C---------GKETNNVVG--------EMIRTHRRLS---S 528
Query: 640 GTTSGDLCNPHSPSRQLDYPSASLGHDIGECSTGLLVGMKENTLKAKLLQARLEGRHARL 699
T D + PSR+ + P G G+K+NTLK KL +AR R+
Sbjct: 529 ETREIDEASCSYPSRRRESPIRQWNTRTVTPDLGAPRGVKDNTLKTKLSEARTTSSRPRV 588
Query: 700 K 700
+
Sbjct: 589 R 589
>AT3G11590.1 | chr3:3660628-3663537 FORWARD LENGTH=623
Length = 622
Score = 103 bits (257), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 64/231 (27%), Positives = 122/231 (52%), Gaps = 2/231 (0%)
Query: 224 SLDIKGRFRGADYNLKTSTELLKVLNRIWSLEEQHTADMSAINGLKLELQHAQEHIQELK 283
++ +K R + L TS ELLK++NR+W +++ ++ MS ++ L EL+ A+ + +L
Sbjct: 216 TVGVKTRLKDCSNALTTSKELLKIINRMWGQDDRPSSSMSLVSALHSELERARLQVNQLI 275
Query: 284 CERRGYRHDVASLVRQLSEDKLVRKNKDKEKIAADIHXXXXXXXXXXXXXXXXXXXXXKF 343
E + +D++ L+++ +E+K V K+ ++E + A I K
Sbjct: 276 HEHKPENNDISYLMKRFAEEKAVWKSNEQEVVEAAIESVAGELEVERKLRRRFESLNKKL 335
Query: 344 GKELSEIKSAFVKAVXXXXXXXXXXXXXXXXCDQFAMGIRDYEEEVRALKQRHV--NYEY 401
GKEL+E KSA +KAV CD+ A I + + EV LK+ E
Sbjct: 336 GKELAETKSALMKAVKEIENEKRARVMVEKVCDELARDISEDKAEVEELKRESFKVKEEV 395
Query: 402 QFDKSVLHVSEAWLDERMQMQNTDVKEDSLKKSTITERLRSEIEAFLLAKR 452
+ ++ +L +++A +ER+QM+ ++ K +K+ ++LR++++ +L AKR
Sbjct: 396 EKEREMLQLADALREERVQMKLSEAKHQLEEKNAAVDKLRNQLQTYLKAKR 446
>AT2G46250.1 | chr2:18991386-18993201 FORWARD LENGTH=469
Length = 468
Score = 93.6 bits (231), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 67/206 (32%), Positives = 101/206 (49%), Gaps = 45/206 (21%)
Query: 231 FRGADYNLKTSTELLKVLNRIWSLEEQHTADMSAINGLKLELQHAQEHIQEL----KCER 286
+ A Y L +ST+LLKVLNRIWSLEEQ+TA+MS + LK+EL + I+E+ K
Sbjct: 152 VKSASYGLGSSTKLLKVLNRIWSLEEQNTANMSLVRALKMELDECRAEIKEVQQRKKLSD 211
Query: 287 RGYR--------HDV-ASLVRQLSEDKLVRKNKDKEKIAADIHXXXXXXXXXXXXXXXXX 337
R R DV S+ R+L +++ VRK + +H
Sbjct: 212 RPLRKKKEEEEVKDVFRSIKRELDDERKVRKE------SETLH----------------- 248
Query: 338 XXXXKFGKELSEIKSAFVKAVXXXXXXXXXXXXXXXXCDQFAMGIRDYEEEVRAL-KQRH 396
K +EL E K KA+ CD+FA ++DYE++VR + K+
Sbjct: 249 ---RKLTRELCEAKHCLSKALKDLEKETQERVVVENLCDEFAKAVKDYEDKVRRIGKKSP 305
Query: 397 VNYEYQFDKSVLHVSEAWLDERMQMQ 422
V+ DK ++ ++E W D+R+QM+
Sbjct: 306 VS-----DKVIVQIAEVWSDQRLQMK 326
>AT3G20350.1 | chr3:7096602-7099372 FORWARD LENGTH=674
Length = 673
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 48/203 (23%), Positives = 96/203 (47%), Gaps = 2/203 (0%)
Query: 257 QHTADMSAINGLKLELQHAQEHIQELKCERRGYRHDVASLVRQLSEDKLVRKNKDKEKIA 316
Q D+S + ++L+LQ A+ I++L+ E+R + + ++++SE++ ++++ EK+
Sbjct: 208 QQVNDVSLASSIELKLQEARACIKDLESEKRSQKKKLEQFLKKVSEERAAWRSREHEKVR 267
Query: 317 ADIHXXXXXXXXXXXXXXXXXXXXXKFGKELSEIKSAFVKAVXXXXXXXXXXXXXXXXCD 376
A I K EL++ K A + + CD
Sbjct: 268 AIIDDMKADMNQEKKTRQRLEIVNSKLVNELADSKLAVKRYMHDYQQERKARELIEEVCD 327
Query: 377 QFAMGIRDYEEEVRALKQRHVNYEYQFD--KSVLHVSEAWLDERMQMQNTDVKEDSLKKS 434
+ A I + + E+ ALK +N + D + +L ++E W +ER+QM+ D K +K
Sbjct: 328 ELAKEIEEDKAEIEALKSESMNLREEVDDERRMLQMAEVWREERVQMKLIDAKVTLEEKY 387
Query: 435 TITERLRSEIEAFLLAKRSVSFK 457
+ +L ++EAFL ++ + K
Sbjct: 388 SQMNKLVGDMEAFLSSRNTTGVK 410
>AT1G50660.1 | chr1:18771386-18774385 FORWARD LENGTH=726
Length = 725
Score = 68.9 bits (167), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 49/220 (22%), Positives = 108/220 (49%), Gaps = 3/220 (1%)
Query: 238 LKTSTELLKVLNRIWSLEEQHTADMSAINGLKLELQHAQEHIQELKCERRGYRHDVASLV 297
L T E+ ++ + + +++Q A +S ++ L+ EL+ A I++L+ E+R ++ + +
Sbjct: 213 LDTMEEVHQIYSNMKRIDQQVNA-VSLVSSLEAELEEAHARIEDLESEKRSHKKKLEQFL 271
Query: 298 RQLSEDKLVRKNKDKEKIAADIHXXXXXXXXXXXXXXXXXXXXXKFGKELSEIKSAFVKA 357
R++SE++ ++++ EK+ A I K EL++ K A +
Sbjct: 272 RKVSEERAAWRSREHEKVRAIIDDMKTDMNREKKTRQRLEIVNHKLVNELADSKLAVKRY 331
Query: 358 VXXXXXXXXXXXXXXXXCDQFAMGIRDYEEEVRALKQRHVNYEYQFD--KSVLHVSEAWL 415
+ CD+ A I + + E+ ALK+ ++ + D + +L ++E W
Sbjct: 332 MQDYEKERKARELIEEVCDELAKEIGEDKAEIEALKRESMSLREEVDDERRMLQMAEVWR 391
Query: 416 DERMQMQNTDVKEDSLKKSTITERLRSEIEAFLLAKRSVS 455
+ER+QM+ D K ++ + +L ++E+FL ++ V+
Sbjct: 392 EERVQMKLIDAKVALEERYSQMNKLVGDLESFLRSRDIVT 431
>AT5G22310.1 | chr5:7383742-7385345 REVERSE LENGTH=482
Length = 481
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 82/351 (23%), Positives = 130/351 (37%), Gaps = 85/351 (24%)
Query: 180 IADSSTNHQKLNQARNCTAQPFSPGSYRSSVGDSSINQAISPARSLDIKGRFRGADYNLK 239
I STN QKLN P Y+ +G +S+ K RF+ L
Sbjct: 152 IRRRSTNPQKLN-----------PIEYKI-IGANSV------------KTRFKNVSDGLT 187
Query: 240 TSTELLKVLNRIWSLEEQH-TADMSAINGLKLELQHAQEHIQELKCERRGYRHDVASLVR 298
TS EL+KVL RI L + H TA I+ L EL A+ ++ L E + L+
Sbjct: 188 TSKELVKVLKRIGELGDDHKTASNRLISALLCELDRARSSLKHLMSELDEEEEEKRRLIE 247
Query: 299 QLSEDKLVRKNKDKEKIAADIHXXXXXXXXXXXXXXXXXXXXXKFGKELSEIKSAFVKAV 358
L E+ +V + + G+EL+E K K
Sbjct: 248 SLQEEAMVERK----------------------LRRRTEKMNRRLGRELTEAKETERKMK 285
Query: 359 XXXXXXXXXXXXXXXXCDQFAMGIRDYEEEVRALKQRHVNYEYQFDKSVLHVSEAWLDER 418
CD+ GI D ++E+ + ++ ++H+++ +ER
Sbjct: 286 EEMKREKRAKDVLEEVCDELTKGIGDDKKEM------------EKEREMMHIADVLREER 333
Query: 419 MQMQNTDVKEDSLKKSTITERLRSEIEAFLLAKRSVSFKNNDNYMHDSRPNARLRRQSLE 478
+QM+ T+ K + K ERL+ E+ L + + ++ +RR LE
Sbjct: 334 VQMKLTEAKFEFEDKYAAVERLKKELRRVLDG-------------EEGKGSSEIRR-ILE 379
Query: 479 SVHFNGATSAPQLAEXXXXXSVASDLHCFELNMH-GSSIQMHDHTGPRRSY 528
+ +G+ + SDL ELNM GS D RR +
Sbjct: 380 VIDGSGSDDDEE-----------SDLKSIELNMESGSKWGYVDSLKDRRRF 419
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.314 0.128 0.372
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 11,386,164
Number of extensions: 429416
Number of successful extensions: 1263
Number of sequences better than 1.0e-05: 7
Number of HSP's gapped: 1246
Number of HSP's successfully gapped: 7
Length of query: 711
Length of database: 11,106,569
Length adjustment: 106
Effective length of query: 605
Effective length of database: 8,200,473
Effective search space: 4961286165
Effective search space used: 4961286165
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 115 (48.9 bits)