Os02g0257300
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Rhodanese-like domain containing protein.
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Os02g0257300 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Rhodanese-like domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 188.62 | 0.645 | 13.4 | -3.47 | 0.344 | 1.4 | 0.358 | 0.999 | -2.08 | 8.47 | 25.44 | 18970 | -- | -- |
| 185.84 | 0.635 | 13.4 | -3.59 | 0.343 | 1.51 | 0.367 | -- | -2.22 | 8.49 | 28.7 | 19061 | -- | -- |
| 187.13 | 0.637 | 13.3 | -3.41 | 0.348 | 1.48 | -- | 0.795 | -2.13 | 8.61 | 28.2 | 19066 | -- | -- |
| 186.18 | 0.635 | 13.4 | -3.58 | 0.344 | 1.51 | -- | -- | -2.22 | 8.92 | 28.7 | 19028 | -- | -- |
| 192.95 | 0.647 | 13.4 | -3.37 | -- | 1.4 | -- | 0.648 | -2.13 | -- | 28.3 | 19005 | -- | -- |
| 243.81 | 0.732 | 13.3 | -2.95 | 0.325 | -- | 0.513 | -- | -1.54 | 7.81 | -- | -- | -- | -- |
| 244.37 | 0.732 | 13.3 | -2.93 | 0.326 | -- | -- | -- | -1.54 | 8.48 | -- | -- | -- | -- |
| 192.89 | 0.647 | 13.4 | -3.57 | -- | 1.47 | -- | -- | -2.21 | -- | 28.7 | 18958 | -- | -- |
| 366.6 | 0.892 | 13.1 | -- | 0.309 | -1.65 | -- | -- | -0.711 | 8.36 | 6.135 | 47520 | -- | -- |
| 250.31 | 0.739 | 13.3 | -2.93 | -- | -- | -- | -- | -1.53 | -- | -- | -- | -- | -- |
| 470.72 | 1.01 | 13.2 | -- | 0.319 | -- | -- | -- | -1.21 | 9.17 | -- | -- | -- | -- |
| 313.35 | 0.824 | 13.3 | -- | -- | -1.54 | -- | -- | -1.57 | -- | 35.47 | 47520 | -- | -- |
| 476.61 | 1.02 | 13.2 | -- | -- | -- | -- | -- | -1.21 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 188.16 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 14 | 6 |
| 6 | 188.89 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 15 | 3 |
| 7 | 188.89 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 15 | 3 |
| 8 | 188.90 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 15 | 3 |
| 102 | 191.71 | precipitation | 0.1 | 43200 | > th | dose dependent | sin | 20 | NA |
| 107 | 191.87 | temperature | 25.0 | 14400 | < th | dose independent | rect. | 6 | 1 |
| 121 | 192.12 | temperature | 25.0 | 14400 | > th | dose dependent | rect. | 7 | 1 |
| 132 | 192.46 | temperature | 25.0 | 14400 | > th | dose independent | rect. | 6 | 1 |
| 142 | 192.73 | temperature | 25.0 | 14400 | > th | dose dependent | rect. | 20 | 1 |
| 167 | 193.22 | wind | 1.0 | 43200 | < th | dose independent | rect. | 3 | 1 |
| 195 | 193.62 | wind | 1.0 | 43200 | > th | dose independent | rect. | 3 | 1 |
| 199 | 193.72 | wind | 1.0 | 43200 | < th | dose dependent | rect. | 3 | 1 |
| 204 | 193.80 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 16 | 1 |
| 234 | 194.19 | radiation | 40.0 | 14400 | > th | dose independent | rect. | 13 | 1 |
| 260 | 194.52 | radiation | 40.0 | 14400 | < th | dose independent | rect. | 13 | 1 |
| 295 | 194.99 | temperature | 25.0 | 14400 | > th | dose dependent | rect. | 20 | 14 |
| 313 | 195.19 | wind | 1.0 | 43200 | < th | dose dependent | rect. | 1 | 4 |
| 329 | 195.38 | radiation | 40.0 | 14400 | > th | dose dependent | rect. | 12 | 1 |
| 337 | 195.50 | wind | 1.0 | 43200 | < th | dose independent | rect. | 1 | 3 |
| 374 | 195.80 | wind | 1.0 | 43200 | > th | dose independent | rect. | 1 | 3 |
| 384 | 195.83 | humidity | 80.0 | 14400 | > th | dose independent | rect. | 14 | 16 |
| 411 | 195.99 | humidity | 80.0 | 14400 | < th | dose independent | rect. | 16 | 11 |
| 415 | 196.01 | temperature | 25.0 | 14400 | > th | dose independent | rect. | 21 | 1 |
| 435 | 196.11 | wind | 1.0 | 43200 | > th | dose dependent | rect. | 7 | 2 |
| 439 | 196.12 | humidity | 80.0 | 14400 | < th | dose independent | rect. | 14 | 16 |
| 498 | 196.38 | humidity | 80.0 | 14400 | > th | dose independent | rect. | 17 | 6 |
| 528 | 196.50 | temperature | 30.0 | 14400 | > th | dose independent | rect. | 18 | 16 |
| 544 | 196.56 | temperature | 30.0 | 14400 | < th | dose independent | rect. | 18 | 16 |
| 546 | 196.57 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 19 | 2 |
| 547 | 196.57 | temperature | 30.0 | 14400 | < th | dose independent | rect. | 2 | 8 |
| 562 | 196.61 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 19 | 2 |
| 566 | 196.61 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 19 | 2 |
| 570 | 196.62 | temperature | 30.0 | 14400 | < th | dose independent | rect. | 21 | 13 |
| 581 | 196.65 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 19 | 23 |
| 593 | 196.70 | humidity | 80.0 | 14400 | > th | dose independent | sin | 15 | NA |
| 604 | 196.74 | temperature | 25.0 | 14400 | > th | dose independent | rect. | 20 | 4 |
| 606 | 196.75 | precipitation | 0.1 | 43200 | > th | dose dependent | no | NA | NA |
| 609 | 196.76 | humidity | 80.0 | 14400 | < th | dose dependent | rect. | 18 | 8 |
| 614 | 196.82 | temperature | 25.0 | 14400 | < th | dose independent | rect. | 21 | 1 |
| 617 | 196.83 | humidity | 90.0 | 14400 | < th | dose dependent | rect. | 20 | 1 |
| 624 | 196.87 | temperature | 25.0 | 14400 | < th | dose independent | rect. | 21 | 3 |
| 629 | 196.89 | humidity | 80.0 | 14400 | < th | dose independent | sin | 15 | NA |
| 643 | 196.96 | temperature | 25.0 | 14400 | > th | dose dependent | sin | 9 | NA |
| 667 | 197.11 | humidity | 80.0 | 14400 | < th | dose independent | rect. | 18 | 4 |
| 674 | 197.14 | temperature | 30.0 | 14400 | > th | dose independent | rect. | 8 | 2 |
| 691 | 197.16 | radiation | 1.0 | 14400 | > th | dose dependent | rect. | 13 | 1 |
| 698 | 197.19 | wind | 9.0 | 43200 | < th | dose dependent | rect. | 7 | 2 |
| 793 | 197.49 | temperature | 30.0 | 14400 | < th | dose independent | rect. | 13 | 1 |
| 904 | 197.85 | temperature | 30.0 | 14400 | < th | dose independent | sin | 8 | NA |
| 944 | 198.03 | temperature | 30.0 | 14400 | > th | dose independent | sin | 8 | NA |
| 972 | 198.12 | precipitation | 0.1 | 43200 | > th | dose independent | sin | 21 | NA |
| 975 | 198.13 | precipitation | 0.1 | 43200 | < th | dose independent | sin | 21 | NA |
| 978 | 198.13 | precipitation | 0.1 | 43200 | < th | dose dependent | sin | 21 | NA |
| 983 | 198.15 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 19 | 5 |
| 997 | 198.21 | radiation | 10.0 | 14400 | > th | dose independent | rect. | 13 | 4 |