Os02g0223700
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os02g0223700 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 45.43 | 0.317 | 14.4 | -0.0744 | 1 | 1.04 | 1.39 | -3.13 | 0.206 | 17.1 | 26.87 | 1183 | -- | -- |
| 46.73 | 0.318 | 14.3 | 0.613 | 0.973 | 0.764 | 1.4 | -- | 0.349 | 17.1 | 27.22 | 1073 | -- | -- |
| 50.07 | 0.33 | 14.4 | 0.0091 | 0.99 | 1.03 | -- | -3.09 | 0.255 | 17.1 | 27.36 | 1126 | -- | -- |
| 51.2 | 0.333 | 14.3 | 0.644 | 0.915 | 0.833 | -- | -- | 0.383 | 16.9 | 27.65 | 953 | -- | -- |
| 65.78 | 0.378 | 14.4 | 0.336 | -- | 1.51 | -- | -1.72 | 0.175 | -- | 25.1 | 460 | -- | -- |
| 66.77 | 0.383 | 14.4 | 0.829 | 0.968 | -- | 1.33 | -- | 0.344 | 17.6 | -- | -- | -- | -- |
| 71.13 | 0.395 | 14.3 | 0.823 | 0.976 | -- | -- | -- | 0.35 | 17.6 | -- | -- | -- | -- |
| 66.68 | 0.38 | 14.4 | 0.568 | -- | 1.37 | -- | -- | 0.228 | -- | 25 | 459 | -- | -- |
| 60.86 | 0.363 | 14.4 | -- | 0.924 | 0.933 | -- | -- | 0.244 | 16.8 | 26.07 | 995 | -- | -- |
| 120.63 | 0.513 | 14.3 | 0.791 | -- | -- | -- | -- | 0.326 | -- | -- | -- | -- | -- |
| 88.97 | 0.441 | 14.4 | -- | 0.963 | -- | -- | -- | 0.258 | 17.7 | -- | -- | -- | -- |
| 74.65 | 0.402 | 14.4 | -- | -- | 1.45 | -- | -- | 0.0777 | -- | 23.24 | 440 | -- | -- |
| 137.14 | 0.547 | 14.4 | -- | -- | -- | -- | -- | 0.238 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 45.28 | temperature | 30 | 720 | < th | dose independent | rect. | 17 | 4 |
| 2 | 45.42 | temperature | 30 | 720 | < th | dose independent | rect. | 16 | 15 |
| 4 | 45.52 | temperature | 30 | 720 | < th | dose independent | rect. | 17 | 6 |
| 9 | 45.59 | temperature | 30 | 720 | < th | dose independent | rect. | 17 | 10 |
| 12 | 45.76 | temperature | 25 | 720 | > th | dose dependent | rect. | 16 | 3 |
| 13 | 45.78 | humidity | 70 | 720 | > th | dose independent | rect. | 17 | 4 |
| 14 | 45.90 | humidity | 70 | 720 | > th | dose independent | rect. | 17 | 12 |
| 33 | 46.40 | humidity | 70 | 720 | > th | dose independent | rect. | 17 | 14 |
| 39 | 46.52 | humidity | 70 | 720 | < th | dose dependent | rect. | 16 | 16 |
| 43 | 46.56 | humidity | 70 | 720 | < th | dose dependent | rect. | 16 | 4 |
| 55 | 46.58 | temperature | 30 | 720 | > th | dose independent | rect. | 16 | 3 |
| 76 | 46.73 | temperature | 30 | 720 | < th | dose independent | sin | 13 | NA |
| 80 | 46.80 | temperature | 30 | 720 | > th | dose independent | sin | 12 | NA |
| 136 | 47.21 | temperature | 30 | 720 | < th | dose independent | rect. | 17 | 2 |
| 158 | 47.25 | temperature | 30 | 720 | > th | dose dependent | sin | 12 | NA |
| 161 | 47.30 | humidity | 60 | 720 | < th | dose independent | rect. | 16 | 17 |
| 162 | 47.31 | humidity | 60 | 720 | < th | dose independent | rect. | 16 | 3 |
| 229 | 47.53 | temperature | 25 | 720 | > th | dose dependent | sin | 16 | NA |
| 264 | 47.66 | humidity | 70 | 720 | > th | dose independent | rect. | 17 | 10 |
| 355 | 48.19 | humidity | 50 | 720 | > th | dose dependent | rect. | 17 | 4 |
| 385 | 48.30 | humidity | 70 | 720 | < th | dose dependent | sin | 12 | NA |
| 404 | 48.41 | humidity | 60 | 720 | < th | dose independent | sin | 12 | NA |
| 408 | 48.42 | radiation | 1 | 720 | > th | dose dependent | rect. | 17 | 13 |
| 420 | 48.48 | radiation | 1 | 720 | > th | dose dependent | rect. | 17 | 2 |
| 438 | 48.50 | temperature | 30 | 720 | < th | dose dependent | rect. | 17 | 3 |
| 495 | 48.58 | temperature | 10 | 720 | > th | dose dependent | rect. | 13 | 12 |
| 507 | 48.62 | temperature | 10 | 720 | > th | dose dependent | rect. | 14 | 10 |
| 584 | 48.73 | temperature | 25 | 1440 | > th | dose dependent | rect. | 7 | 13 |
| 585 | 48.74 | humidity | 60 | 720 | > th | dose independent | sin | 12 | NA |
| 618 | 48.81 | wind | 7 | 43200 | > th | dose dependent | rect. | 9 | 12 |
| 626 | 48.82 | wind | 7 | 43200 | > th | dose dependent | sin | 21 | NA |
| 669 | 48.84 | wind | 7 | 43200 | > th | dose dependent | rect. | 9 | 10 |
| 750 | 48.92 | temperature | 10 | 1440 | > th | dose dependent | rect. | 17 | 1 |
| 762 | 48.95 | wind | 9 | 43200 | > th | dose independent | rect. | 13 | 19 |
| 811 | 49.01 | wind | 7 | 43200 | > th | dose dependent | rect. | 11 | 21 |
| 826 | 49.04 | wind | 9 | 43200 | < th | dose independent | rect. | 13 | 19 |
| 837 | 49.05 | wind | 7 | 43200 | > th | dose dependent | rect. | 13 | 19 |
| 932 | 49.17 | wind | 9 | 43200 | > th | dose independent | rect. | 9 | 12 |
| 954 | 49.19 | wind | 7 | 43200 | > th | dose independent | rect. | 2 | 16 |
| 955 | 49.19 | wind | 7 | 43200 | < th | dose independent | rect. | 2 | 16 |
| 973 | 49.20 | temperature | 25 | 1440 | > th | dose dependent | no | NA | NA |