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Os02g0197900

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Conserved hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 9.21 (0.0145) R2 : 0.656
β1 : -0.943 (0.053) R2dD : 0.248 R2D : 0.22
β2 : 0.897 (0.0375) R2dC : 0.433 R2C : 0.414
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.0847 (0.0309) R2dN8 : 0.0076 R2N8 : -0.0124
σ : 0.272
deviance : 33.8
__
_____
C
peak time of C : 4.99
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = radiation, response mode = < th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
30.9 0.261 9.21 -0.974 0.791 0.173 0.592 -0.746 -0.082 5.66 9.911 238 -- --
33.46 0.269 9.21 -0.937 0.807 0.162 0.523 -- -0.0648 5.61 9.911 234 -- --
31.43 0.263 9.21 -0.981 0.896 0.0594 -- -0.599 -0.094 5.28 7.44 153 -- --
33.34 0.269 9.21 -0.937 0.815 0.158 -- -- -0.0706 5.56 9.915 233 -- --
35.54 0.278 9.22 -0.917 -- 0.946 -- -0.399 -0.0292 -- 2.598 613 -- --
33.8 0.273 9.21 -0.943 0.897 -- 0.0187 -- -0.0846 5 -- -- -- --
33.8 0.272 9.21 -0.943 0.897 -- -- -- -0.0847 4.99 -- -- -- --
35.61 0.278 9.21 -0.907 -- 0.97 -- -- -0.0275 -- 2.321 620 -- --
56.25 0.349 9.18 -- 0.771 0.219 -- -- 0.0417 5.43 20.08 254 -- --
76.13 0.408 9.22 -0.911 -- -- -- -- -0.0617 -- -- -- -- --
57.25 0.354 9.19 -- 0.881 -- -- -- 0.0204 5.03 -- -- -- --
54.74 0.345 9.2 -- -- 1 -- -- 0.0425 -- 4.576e-07 645 -- --
98 0.462 9.2 -- -- -- -- -- 0.0393 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 28.56 humidity 80.0 720 > th dose independent rect. 21 10
2 28.62 humidity 80.0 720 > th dose independent rect. 19 5
11 29.09 temperature 20.0 720 > th dose independent rect. 5 18
19 29.20 humidity 80.0 720 < th dose dependent rect. 20 2
28 29.29 humidity 70.0 720 > th dose independent rect. 19 1
30 29.29 atmosphere 1010.0 720 < th dose independent rect. 16 6
34 29.35 temperature 30.0 1440 < th dose independent rect. 18 11
45 29.43 temperature 10.0 720 > th dose dependent rect. 16 6
47 29.46 humidity 60.0 720 > th dose dependent rect. 19 5
52 29.51 temperature 20.0 720 > th dose independent sin 23 NA
56 29.52 temperature 10.0 10 > th dose dependent sin 15 NA
60 29.54 atmosphere 1000.0 270 > th dose independent rect. 19 8
65 29.55 atmosphere 1010.0 720 < th dose independent rect. 10 12
74 29.57 temperature 30.0 270 < th dose independent rect. 1 18
88 29.61 temperature 20.0 720 > th dose independent rect. 6 11
90 29.61 temperature 30.0 90 < th dose independent rect. 3 16
107 29.65 precipitation 0.1 720 < th dose independent rect. 20 16
108 29.65 temperature 10.0 720 > th dose dependent rect. 10 11
111 29.65 precipitation 0.1 720 < th dose dependent rect. 20 16
113 29.66 atmosphere 1010.0 720 < th dose independent rect. 10 9
114 29.66 temperature 30.0 270 < th dose independent rect. 1 16
116 29.66 temperature 10.0 720 > th dose dependent rect. 8 9
117 29.67 radiation 10.0 720 < th dose independent rect. 16 1
120 29.67 temperature 10.0 720 > th dose dependent rect. 10 9
123 29.67 temperature 10.0 720 > th dose dependent rect. 7 14
129 29.69 atmosphere 1000.0 270 > th dose independent rect. 23 1
133 29.69 atmosphere 1010.0 270 < th dose independent rect. 17 12
134 29.69 atmosphere 1015.0 720 < th dose independent rect. 7 15
137 29.69 temperature 30.0 720 < th dose dependent rect. 4 11
138 29.70 humidity 80.0 720 < th dose independent rect. 20 2
145 29.70 temperature 10.0 270 > th dose dependent rect. 9 15
150 29.71 temperature 10.0 720 > th dose dependent rect. 9 6
161 29.73 temperature 20.0 720 > th dose independent rect. 12 14
173 29.74 temperature 10.0 30 > th dose dependent rect. 18 10
175 29.75 temperature 20.0 270 > th dose independent rect. 10 14
176 29.75 humidity 80.0 720 > th dose dependent rect. 22 2
182 29.76 atmosphere 1010.0 720 < th dose independent rect. 20 8
187 29.76 precipitation 0.1 720 < th dose independent rect. 7 15
191 29.76 precipitation 0.1 720 < th dose dependent rect. 7 15
194 29.77 temperature 20.0 720 > th dose independent rect. 13 12
243 29.82 temperature 20.0 720 > th dose independent rect. 14 9
255 29.83 temperature 30.0 90 < th dose independent rect. 3 13
260 29.84 humidity 50.0 14400 > th dose independent rect. 19 10
267 29.84 temperature 10.0 720 > th dose dependent sin 22 NA
292 29.87 humidity 80.0 720 > th dose independent sin 10 NA
293 29.87 atmosphere 1010.0 720 < th dose independent sin 18 NA
297 29.87 temperature 15.0 30 > th dose independent rect. 18 10
299 29.87 atmosphere 1010.0 30 < th dose independent rect. 18 14
309 29.88 atmosphere 1010.0 270 < th dose independent sin 11 NA
311 29.88 atmosphere 1000.0 270 > th dose independent rect. 21 4
312 29.88 atmosphere 1000.0 10 > th dose independent rect. 23 5
314 29.88 precipitation 0.1 720 < th dose independent rect. 10 9
321 29.88 precipitation 0.1 720 < th dose dependent rect. 10 9
333 29.89 precipitation 0.1 720 < th dose independent rect. 10 18
336 29.89 temperature 30.0 270 < th dose dependent rect. 23 1
338 29.89 precipitation 0.1 720 < th dose dependent rect. 10 18
356 29.91 temperature 15.0 720 > th dose independent rect. 16 6
358 29.91 temperature 10.0 720 > th dose independent rect. 22 9
359 29.91 temperature 30.0 720 < th dose independent rect. 22 9
360 29.91 humidity 50.0 720 > th dose independent rect. 22 9
362 29.91 atmosphere 995.0 720 > th dose independent rect. 22 9
363 29.91 radiation 30.0 720 < th dose independent rect. 22 9
368 29.91 temperature 10.0 720 > th dose independent rect. 7 15
369 29.91 humidity 50.0 720 > th dose independent rect. 19 15
375 29.92 atmosphere 1000.0 90 > th dose independent rect. 23 4
377 29.92 wind 9.0 720 < th dose independent rect. 22 9
395 29.93 temperature 10.0 720 > th dose independent rect. 10 9
400 29.93 temperature 10.0 720 > th dose independent rect. 19 15
402 29.93 atmosphere 995.0 720 > th dose independent rect. 19 15
407 29.93 humidity 50.0 720 > th dose dependent rect. 22 9
416 29.94 humidity 80.0 10 > th dose independent rect. 19 9
419 29.94 wind 1.0 30 > th dose independent rect. 4 14
422 29.94 temperature 10.0 720 > th dose dependent rect. 18 1
423 29.94 humidity 60.0 720 > th dose dependent rect. 19 1
471 29.97 temperature 30.0 30 < th dose dependent rect. 23 4
476 29.98 temperature 20.0 270 > th dose independent rect. 18 7
483 29.98 temperature 10.0 270 > th dose dependent rect. 17 11
505 30.00 temperature 25.0 270 < th dose independent rect. 1 9
529 30.01 humidity 60.0 720 > th dose independent rect. 24 14
530 30.01 wind 9.0 720 < th dose independent rect. 19 15
538 30.02 humidity 80.0 270 > th dose independent rect. 23 1
554 30.03 radiation 10.0 720 < th dose independent rect. 16 9
562 30.04 temperature 15.0 720 > th dose independent rect. 18 10
563 30.04 radiation 10.0 720 < th dose independent rect. 16 11
565 30.04 temperature 15.0 30 > th dose independent rect. 18 14
599 30.06 temperature 30.0 720 < th dose dependent sin 3 NA
604 30.06 wind 9.0 270 < th dose dependent rect. 13 11
619 30.07 wind 1.0 270 > th dose independent rect. 4 12
620 30.07 atmosphere 1010.0 10 < th dose independent rect. 18 12
622 30.07 atmosphere 1015.0 720 < th dose independent rect. 20 16
624 30.07 temperature 30.0 720 < th dose dependent rect. 7 2
629 30.08 temperature 20.0 1440 < th dose independent rect. 21 1
645 30.08 temperature 10.0 10 > th dose dependent rect. 18 12
647 30.08 wind 9.0 30 < th dose dependent rect. 18 14
665 30.09 atmosphere 995.0 270 > th dose dependent rect. 23 1
675 30.10 wind 7.0 720 < th dose independent rect. 4 6
676 30.10 precipitation 0.1 720 < th dose independent rect. 16 6
685 30.10 atmosphere 1015.0 720 < th dose independent rect. 17 20
691 30.10 precipitation 0.1 720 < th dose dependent rect. 16 6
698 30.11 temperature 20.0 720 > th dose independent rect. 19 2
701 30.11 wind 5.0 30 < th dose independent rect. 19 9
711 30.12 atmosphere 1000.0 270 > th dose independent sin 11 NA
723 30.12 atmosphere 995.0 720 > th dose independent rect. 22 18
726 30.12 atmosphere 995.0 30 > th dose dependent rect. 23 4
730 30.12 atmosphere 995.0 90 > th dose dependent rect. 19 8
731 30.12 wind 7.0 30 < th dose dependent rect. 18 10
752 30.13 temperature 30.0 720 < th dose dependent rect. 6 4
765 30.14 radiation 40.0 270 < th dose independent rect. 24 13
766 30.14 atmosphere 1015.0 720 < th dose independent rect. 16 16
779 30.15 wind 1.0 90 > th dose independent sin 2 NA
781 30.15 atmosphere 1010.0 720 < th dose independent rect. 18 1
782 30.15 temperature 30.0 720 < th dose independent rect. 17 2
803 30.16 atmosphere 1000.0 10 > th dose independent sin 9 NA
810 30.16 temperature 30.0 720 < th dose independent rect. 6 9
815 30.16 atmosphere 1015.0 720 < th dose independent rect. 18 18
853 30.17 temperature 15.0 720 > th dose independent rect. 16 14
892 30.19 radiation 30.0 720 < th dose independent rect. 16 6
894 30.19 precipitation 0.1 720 < th dose independent rect. 20 8
897 30.19 temperature 15.0 10 > th dose independent rect. 18 12
901 30.19 precipitation 0.1 720 < th dose independent rect. 18 18
910 30.19 temperature 30.0 90 < th dose dependent rect. 19 8
912 30.19 precipitation 0.1 720 < th dose dependent rect. 20 8
917 30.19 precipitation 0.1 720 < th dose dependent rect. 18 18
930 30.20 humidity 50.0 14400 > th dose independent rect. 19 12
936 30.20 atmosphere 1015.0 720 < th dose dependent rect. 17 5
954 30.21 atmosphere 995.0 720 > th dose independent rect. 4 14
961 30.21 humidity 60.0 10 > th dose dependent rect. 19 9
963 30.21 radiation 10.0 720 < th dose dependent rect. 16 9
977 30.22 precipitation 0.1 720 < th dose independent rect. 18 10
981 30.22 radiation 10.0 270 < th dose independent rect. 9 19
993 30.22 humidity 60.0 90 > th dose dependent rect. 19 8
996 30.22 precipitation 0.1 720 < th dose dependent rect. 18 10