BLASTP 2.2.23 [Feb-03-2010]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Os02g0197900 Os02g0197900|AK102759
         (161 letters)

Database: rap3 
           52,214 sequences; 17,035,801 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Os02g0197900  Conserved hypothetical protein                      318   8e-88
Os06g0609700  Esterase/lipase/thioesterase domain containing...   213   6e-56

>Os02g0197900 Conserved hypothetical protein
          Length = 161

 Score =  318 bits (816), Expect = 8e-88,   Method: Compositional matrix adjust.
 Identities = 153/161 (95%), Positives = 153/161 (95%)

Query: 1   VPCAVDAMIEQFVNFVIRPPRSEYNPDQYLWETEFILAGRKYKRLDLELTNARGLTIKCS 60
           VPCAVDAMIEQFVNFVIRPPRSEYNPDQYLWETEFILAGRKYKRLDLELTNARGLTIKCS
Sbjct: 1   VPCAVDAMIEQFVNFVIRPPRSEYNPDQYLWETEFILAGRKYKRLDLELTNARGLTIKCS 60

Query: 61  HYVPAFIPENTSLPCVIYCHGNSGCRADANEAAVILLPANITVFTLDFXXXXXXXXDYVS 120
           HYVPAFIPENTSLPCVIYCHGNSGCRADANEAAVILLPANITVFTLDF        DYVS
Sbjct: 61  HYVPAFIPENTSLPCVIYCHGNSGCRADANEAAVILLPANITVFTLDFSGSGLSGGDYVS 120

Query: 121 LGWHEAFGGDRWVLLQAYSMEQKIPRLLEWYWIVLSLTYMA 161
           LGWHEAFGGDRWVLLQAYSMEQKIPRLLEWYWIVLSLTYMA
Sbjct: 121 LGWHEAFGGDRWVLLQAYSMEQKIPRLLEWYWIVLSLTYMA 161



>Os06g0609700 Esterase/lipase/thioesterase domain containing protein
          Length = 502

 Score =  213 bits (541), Expect = 6e-56,   Method: Compositional matrix adjust.
 Identities = 96/118 (81%), Positives = 104/118 (88%)

Query: 8   MIEQFVNFVIRPPRSEYNPDQYLWETEFILAGRKYKRLDLELTNARGLTIKCSHYVPAFI 67
           MIEQFVNFVIRPPR+EYNPDQYLWE EF LAGRKYKR+DLELTN R  T+KCSHYVPA I
Sbjct: 1   MIEQFVNFVIRPPRAEYNPDQYLWEPEFTLAGRKYKRIDLELTNGRDQTLKCSHYVPAVI 60

Query: 68  PENTSLPCVIYCHGNSGCRADANEAAVILLPANITVFTLDFXXXXXXXXDYVSLGWHE 125
           P+NT+LPCVIYCHGNSGCRADANEAAVILLP+NIT+FTLDF        +YVSLGWHE
Sbjct: 61  PDNTALPCVIYCHGNSGCRADANEAAVILLPSNITLFTLDFAGSGLSGGEYVSLGWHE 118



  Database: rap3
    Posted date:  Nov 19, 2010  6:03 PM
  Number of letters in database: 17,035,801
  Number of sequences in database:  52,214
  
Lambda     K      H
   0.325    0.140    0.461 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 5,450,636
Number of extensions: 191313
Number of successful extensions: 442
Number of sequences better than 1.0e-10: 2
Number of HSP's gapped: 442
Number of HSP's successfully gapped: 2
Length of query: 161
Length of database: 17,035,801
Length adjustment: 93
Effective length of query: 68
Effective length of database: 12,179,899
Effective search space: 828233132
Effective search space used: 828233132
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 152 (63.2 bits)