Os02g0197800
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Protein of unknown function DUF971 family protein.
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Os02g0197800 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Protein of unknown function DUF971 family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 28.37 | 0.25 | 8.99 | -1.28 | 0.864 | 0.908 | -0.185 | 0.85 | -0.409 | 9.83 | 16.33 | 19 | -- | -- |
| 28.83 | 0.25 | 9 | -1.39 | 0.867 | 0.827 | -0.0542 | -- | -0.442 | 9.77 | 19.69 | 21 | -- | -- |
| 28.46 | 0.248 | 8.99 | -1.31 | 0.863 | 0.871 | -- | 0.627 | -0.419 | 9.79 | 17.47 | 18 | -- | -- |
| 28.81 | 0.25 | 9 | -1.39 | 0.865 | 0.827 | -- | -- | -0.444 | 9.76 | 19.64 | 18 | -- | -- |
| 68.93 | 0.387 | 9.04 | -1.43 | -- | 1.25 | -- | 0.395 | -0.488 | -- | 17.9 | 5 | -- | -- |
| 38.83 | 0.292 | 8.97 | -1.21 | 1 | -- | -0.0254 | -- | -0.302 | 10.9 | -- | -- | -- | -- |
| 38.83 | 0.292 | 8.97 | -1.22 | 1 | -- | -- | -- | -0.302 | 10.9 | -- | -- | -- | -- |
| 69.08 | 0.387 | 9.04 | -1.49 | -- | 1.26 | -- | -- | -0.502 | -- | 17.9 | 5 | -- | -- |
| 75.96 | 0.408 | 8.95 | -- | 0.941 | 0.334 | -- | -- | -0.215 | 10.6 | 20.59 | 22 | -- | -- |
| 101.22 | 0.47 | 9 | -1.24 | -- | -- | -- | -- | -0.309 | -- | -- | -- | -- | -- |
| 77.79 | 0.413 | 8.94 | -- | 1.01 | -- | -- | -- | -0.167 | 11 | -- | -- | -- | -- |
| 123.82 | 0.518 | 8.99 | -- | -- | 0.853 | -- | -- | -0.291 | -- | 20.2 | 3 | -- | -- |
| 141.58 | 0.555 | 8.97 | -- | -- | -- | -- | -- | -0.171 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 27.36 | temperature | 30.0 | 1440 | > th | dose independent | rect. | 10 | 1 |
| 2 | 27.38 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 10 | 1 |
| 3 | 27.38 | temperature | 25.0 | 4320 | < th | dose independent | rect. | 1 | 7 |
| 4 | 27.43 | temperature | 25.0 | 4320 | > th | dose independent | rect. | 23 | 9 |
| 5 | 27.43 | temperature | 25.0 | 4320 | < th | dose independent | rect. | 19 | 13 |
| 6 | 27.44 | temperature | 25.0 | 4320 | > th | dose independent | rect. | 20 | 12 |
| 8 | 27.45 | temperature | 15.0 | 30 | > th | dose dependent | rect. | 3 | 23 |
| 19 | 27.53 | temperature | 25.0 | 4320 | > th | dose independent | rect. | 19 | 9 |
| 37 | 27.66 | temperature | 25.0 | 4320 | > th | dose dependent | rect. | 23 | 9 |
| 72 | 27.77 | temperature | 25.0 | 4320 | > th | dose independent | rect. | 6 | 1 |
| 74 | 27.77 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 7 | 6 |
| 82 | 27.78 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 5 | 8 |
| 83 | 27.78 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 19 | 18 |
| 85 | 27.79 | temperature | 25.0 | 4320 | < th | dose independent | rect. | 20 | 1 |
| 90 | 27.80 | temperature | 25.0 | 4320 | < th | dose independent | rect. | 5 | 2 |
| 105 | 27.82 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 22 | 15 |
| 122 | 27.84 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 17 | 2 |
| 166 | 27.90 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 4 | 20 |
| 190 | 27.96 | temperature | 25.0 | 4320 | > th | dose dependent | rect. | 22 | 3 |
| 191 | 27.97 | temperature | 25.0 | 4320 | > th | dose independent | rect. | 20 | 1 |
| 224 | 28.00 | temperature | 25.0 | 4320 | > th | dose dependent | rect. | 4 | 3 |
| 233 | 28.02 | temperature | 25.0 | 4320 | < th | dose independent | sin | 11 | NA |
| 239 | 28.03 | temperature | 25.0 | 4320 | > th | dose independent | sin | 11 | NA |
| 243 | 28.04 | temperature | 25.0 | 4320 | > th | dose dependent | rect. | 21 | 5 |
| 281 | 28.07 | temperature | 30.0 | 1440 | > th | dose dependent | rect. | 12 | 1 |
| 286 | 28.08 | temperature | 20.0 | 30 | > th | dose dependent | rect. | 21 | 23 |
| 336 | 28.14 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 12 | 21 |
| 369 | 28.21 | temperature | 30.0 | 1440 | > th | dose independent | sin | 8 | NA |
| 370 | 28.21 | radiation | 20.0 | 4320 | > th | dose independent | rect. | 15 | 2 |
| 403 | 28.23 | radiation | 20.0 | 4320 | < th | dose independent | rect. | 15 | 1 |
| 417 | 28.25 | temperature | 30.0 | 1440 | < th | dose independent | sin | 8 | NA |
| 418 | 28.25 | radiation | 20.0 | 4320 | < th | dose independent | rect. | 15 | 6 |
| 423 | 28.25 | radiation | 20.0 | 4320 | < th | dose independent | rect. | 15 | 15 |
| 425 | 28.25 | wind | 9.0 | 43200 | > th | dose dependent | rect. | 17 | 13 |
| 439 | 28.27 | wind | 1.0 | 14400 | < th | dose dependent | rect. | 10 | 1 |
| 470 | 28.30 | wind | 9.0 | 43200 | > th | dose independent | rect. | 20 | 2 |
| 516 | 28.35 | temperature | 30.0 | 1440 | > th | dose independent | rect. | 16 | 22 |
| 525 | 28.36 | temperature | 30.0 | 10 | < th | dose dependent | rect. | 9 | 23 |
| 537 | 28.37 | temperature | 30.0 | 90 | < th | dose dependent | rect. | 23 | 23 |
| 538 | 28.38 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 17 | 2 |
| 556 | 28.38 | temperature | 30.0 | 30 | < th | dose dependent | rect. | 19 | 23 |
| 564 | 28.40 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 17 | 2 |
| 568 | 28.40 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 17 | 2 |
| 586 | 28.44 | temperature | 15.0 | 10 | > th | dose dependent | no | NA | NA |
| 599 | 28.46 | wind | 9.0 | 43200 | > th | dose independent | rect. | 20 | 9 |
| 604 | 28.46 | temperature | 30.0 | 10 | < th | dose dependent | rect. | 9 | 21 |
| 605 | 28.46 | temperature | 20.0 | 30 | > th | dose dependent | rect. | 1 | 23 |
| 613 | 28.47 | wind | 9.0 | 43200 | > th | dose dependent | rect. | 20 | 2 |
| 634 | 28.47 | temperature | 20.0 | 10 | > th | dose dependent | rect. | 13 | 23 |
| 644 | 28.49 | wind | 9.0 | 43200 | < th | dose independent | rect. | 20 | 2 |
| 645 | 28.49 | wind | 9.0 | 43200 | < th | dose independent | rect. | 20 | 5 |
| 651 | 28.50 | temperature | 30.0 | 1440 | > th | dose independent | rect. | 16 | 1 |
| 669 | 28.50 | temperature | 30.0 | 1440 | > th | dose dependent | sin | 7 | NA |
| 678 | 28.51 | wind | 9.0 | 43200 | < th | dose independent | rect. | 20 | 7 |
| 700 | 28.53 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 16 | 1 |
| 708 | 28.54 | wind | 1.0 | 14400 | < th | dose independent | rect. | 10 | 1 |
| 739 | 28.55 | wind | 9.0 | 43200 | > th | dose dependent | rect. | 20 | 9 |
| 751 | 28.56 | temperature | 30.0 | 90 | < th | dose dependent | rect. | 7 | 23 |
| 853 | 28.63 | temperature | 20.0 | 10 | > th | dose dependent | rect. | 15 | 23 |
| 880 | 28.65 | temperature | 20.0 | 720 | > th | dose dependent | rect. | 20 | 22 |
| 927 | 28.70 | temperature | 25.0 | 4320 | > th | dose dependent | rect. | 20 | 1 |
| 963 | 28.72 | radiation | 20.0 | 4320 | > th | dose dependent | rect. | 15 | 1 |
| 979 | 28.73 | temperature | 25.0 | 4320 | > th | dose dependent | sin | 11 | NA |
| 982 | 28.73 | wind | 9.0 | 43200 | > th | dose dependent | rect. | 17 | 7 |