Os02g0197700
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os02g0197700 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 196.32 | 0.658 | 6.9 | -2.9 | 3.08 | 1.88 | 1.34 | 0.388 | -0.916 | 12.2 | 19.9 | 1515 | -- | -- |
| 196.59 | 0.653 | 6.9 | -2.93 | 3.08 | 1.87 | 1.25 | -- | -0.922 | 12.2 | 20.21 | 1515 | -- | -- |
| 204.01 | 0.665 | 6.9 | -2.89 | 3.07 | 1.89 | -- | 0.219 | -0.92 | 12.2 | 20.1 | 1541 | -- | -- |
| 204.05 | 0.665 | 6.91 | -2.95 | 3.06 | 1.88 | -- | -- | -0.934 | 12.2 | 20.3 | 1546 | -- | -- |
| 497.02 | 1.04 | 7.01 | -3.09 | -- | 4.07 | -- | 0.227 | -1.18 | -- | 20.1 | 1541 | -- | -- |
| 308.74 | 0.824 | 6.81 | -2.29 | 3.01 | -- | 1.26 | -- | -0.494 | 12.1 | -- | -- | -- | -- |
| 315.64 | 0.832 | 6.81 | -2.24 | 3.01 | -- | -- | -- | -0.488 | 12.2 | -- | -- | -- | -- |
| 496.04 | 1.04 | 7.02 | -3.14 | -- | 4.11 | -- | -- | -1.2 | -- | 19.81 | 1637 | -- | -- |
| 405.27 | 0.938 | 6.79 | -- | 3.31 | 1.2 | -- | -- | -0.429 | 12.1 | 21.97 | 1017 | -- | -- |
| 884.83 | 1.39 | 6.87 | -2.34 | -- | -- | -- | -- | -0.533 | -- | -- | -- | -- | -- |
| 448.37 | 0.991 | 6.75 | -- | 3.04 | -- | -- | -- | -0.238 | 12.2 | -- | -- | -- | -- |
| 745.66 | 1.28 | 6.92 | -- | -- | 3.43 | -- | -- | -0.752 | -- | 19.81 | 1637 | -- | -- |
| 1029.4 | 1.5 | 6.81 | -- | -- | -- | -- | -- | -0.273 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 195.17 | temperature | 20 | 1440 | > th | dose dependent | rect. | 11 | 20 |
| 3 | 195.25 | temperature | 20 | 1440 | > th | dose dependent | rect. | 13 | 18 |
| 9 | 195.51 | temperature | 20 | 1440 | > th | dose dependent | rect. | 13 | 15 |
| 31 | 195.99 | temperature | 20 | 1440 | > th | dose dependent | sin | 16 | NA |
| 51 | 196.44 | temperature | 20 | 1440 | > th | dose dependent | rect. | 13 | 23 |
| 63 | 196.64 | temperature | 20 | 1440 | > th | dose dependent | rect. | 20 | 23 |
| 64 | 196.65 | temperature | 20 | 1440 | > th | dose dependent | no | NA | NA |
| 73 | 196.70 | temperature | 20 | 1440 | > th | dose dependent | rect. | 5 | 23 |
| 75 | 196.70 | temperature | 20 | 1440 | > th | dose dependent | rect. | 22 | 23 |
| 660 | 199.66 | temperature | 20 | 1440 | > th | dose dependent | sin | 5 | NA |
| 707 | 199.94 | temperature | 30 | 720 | < th | dose dependent | rect. | 3 | 19 |
| 779 | 200.40 | temperature | 30 | 1440 | < th | dose dependent | sin | 16 | NA |
| 807 | 200.58 | temperature | 30 | 1440 | < th | dose dependent | rect. | 13 | 22 |
| 811 | 200.60 | temperature | 30 | 1440 | < th | dose dependent | rect. | 13 | 19 |
| 818 | 200.62 | temperature | 30 | 1440 | < th | dose dependent | rect. | 9 | 22 |
| 819 | 200.65 | temperature | 20 | 1440 | > th | dose dependent | rect. | 6 | 1 |
| 833 | 200.71 | temperature | 30 | 1440 | < th | dose dependent | rect. | 15 | 10 |
| 837 | 200.73 | temperature | 30 | 1440 | < th | dose dependent | rect. | 14 | 13 |
| 851 | 200.79 | temperature | 20 | 1440 | > th | dose dependent | rect. | 20 | 1 |
| 901 | 201.03 | temperature | 30 | 1440 | < th | dose dependent | rect. | 1 | 23 |
| 911 | 201.06 | temperature | 30 | 1440 | < th | dose dependent | rect. | 16 | 23 |
| 919 | 201.09 | temperature | 30 | 1440 | < th | dose dependent | rect. | 4 | 23 |
| 932 | 201.13 | temperature | 30 | 1440 | < th | dose dependent | no | NA | NA |