Os02g0194000
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Myb, DNA-binding domain containing protein.
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Os02g0194000 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Myb, DNA-binding domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 15.03 | 0.182 | 11.2 | 0.483 | 0.279 | -0.518 | -0.0973 | 0.605 | 0.194 | 3.55 | 49.9 | 4268 | -- | -- |
| 15.26 | 0.182 | 11.2 | 0.432 | 0.271 | -0.318 | -0.0805 | -- | 0.205 | 3.59 | 49.83 | 4268 | -- | -- |
| 15.06 | 0.181 | 11.2 | 0.485 | 0.278 | -0.518 | -- | 0.599 | 0.194 | 3.52 | 49.77 | 4268 | -- | -- |
| 15.29 | 0.182 | 11.2 | 0.434 | 0.271 | -0.321 | -- | -- | 0.205 | 3.58 | 49.62 | 4268 | -- | -- |
| 19.1 | 0.204 | 11.2 | 0.421 | -- | -0.538 | -- | 0.365 | 0.217 | -- | 50 | 4759 | -- | -- |
| 17.17 | 0.194 | 11.2 | 0.302 | 0.257 | -- | -0.148 | -- | 0.237 | 3.82 | -- | -- | -- | -- |
| 17.23 | 0.194 | 11.2 | 0.304 | 0.256 | -- | -- | -- | 0.238 | 3.77 | -- | -- | -- | -- |
| 19.1 | 0.204 | 11.2 | 0.43 | -- | -0.469 | -- | -- | 0.215 | -- | 50 | 4704 | -- | -- |
| 16.93 | 0.192 | 11.2 | -- | 0.257 | -0.346 | -- | -- | 0.216 | 3.48 | 61 | 29476 | -- | -- |
| 20.85 | 0.213 | 11.2 | 0.314 | -- | -- | -- | -- | 0.245 | -- | -- | -- | -- | -- |
| 19.66 | 0.207 | 11.2 | -- | 0.262 | -- | -- | -- | 0.204 | 3.76 | -- | -- | -- | -- |
| 20.52 | 0.211 | 11.2 | -- | -- | -0.329 | -- | -- | 0.211 | -- | 60.61 | 29354 | -- | -- |
| 23.45 | 0.226 | 11.2 | -- | -- | -- | -- | -- | 0.21 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 14.51 | humidity | 50.0 | 4320 | < th | dose independent | rect. | 15 | 1 |
| 2 | 14.61 | humidity | 70.0 | 1440 | > th | dose dependent | rect. | 11 | 1 |
| 3 | 14.65 | humidity | 80.0 | 1440 | > th | dose independent | rect. | 6 | 4 |
| 5 | 14.68 | humidity | 80.0 | 1440 | < th | dose independent | rect. | 6 | 4 |
| 11 | 14.76 | wind | 1.0 | 14400 | < th | dose independent | rect. | 1 | 2 |
| 13 | 14.77 | humidity | 80.0 | 14400 | > th | dose independent | rect. | 5 | 2 |
| 14 | 14.77 | humidity | 80.0 | 1440 | > th | dose independent | rect. | 10 | 2 |
| 15 | 14.77 | wind | 9.0 | 43200 | > th | dose dependent | rect. | 12 | 1 |
| 16 | 14.78 | humidity | 80.0 | 14400 | < th | dose independent | rect. | 5 | 2 |
| 21 | 14.81 | humidity | 50.0 | 720 | > th | dose dependent | rect. | 17 | 2 |
| 25 | 14.83 | humidity | 80.0 | 1440 | < th | dose independent | rect. | 11 | 1 |
| 37 | 14.87 | humidity | 50.0 | 4320 | < th | dose independent | rect. | 13 | 4 |
| 54 | 14.93 | humidity | 80.0 | 14400 | > th | dose independent | rect. | 2 | 1 |
| 76 | 14.93 | wind | 1.0 | 43200 | < th | dose dependent | rect. | 12 | 1 |
| 78 | 14.94 | humidity | 80.0 | 14400 | < th | dose independent | rect. | 2 | 1 |
| 99 | 14.95 | humidity | 50.0 | 4320 | < th | dose dependent | sin | 11 | NA |
| 100 | 14.95 | humidity | 80.0 | 14400 | < th | dose dependent | rect. | 5 | 2 |
| 101 | 14.96 | humidity | 50.0 | 4320 | < th | dose independent | sin | 17 | NA |
| 126 | 14.99 | humidity | 50.0 | 4320 | > th | dose independent | rect. | 15 | 1 |
| 128 | 14.99 | wind | 1.0 | 14400 | > th | dose independent | rect. | 1 | 2 |
| 137 | 14.99 | humidity | 60.0 | 14400 | < th | dose independent | rect. | 16 | 18 |
| 142 | 14.99 | humidity | 60.0 | 4320 | < th | dose dependent | rect. | 15 | 20 |
| 214 | 15.02 | humidity | 50.0 | 4320 | < th | dose independent | rect. | 15 | 23 |
| 218 | 15.03 | temperature | 25.0 | 1440 | < th | dose independent | rect. | 1 | 2 |
| 245 | 15.04 | humidity | 50.0 | 4320 | < th | dose independent | no | NA | NA |
| 293 | 15.04 | humidity | 60.0 | 14400 | > th | dose independent | rect. | 16 | 18 |
| 383 | 15.06 | humidity | 80.0 | 14400 | < th | dose dependent | rect. | 2 | 1 |
| 384 | 15.06 | humidity | 60.0 | 4320 | < th | dose dependent | rect. | 15 | 3 |
| 400 | 15.08 | humidity | 80.0 | 14400 | < th | dose dependent | rect. | 2 | 5 |
| 423 | 15.10 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 14 | 3 |
| 431 | 15.10 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 14 | 3 |
| 434 | 15.11 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 14 | 3 |
| 446 | 15.12 | wind | 1.0 | 14400 | < th | dose dependent | rect. | 1 | 2 |
| 448 | 15.12 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 14 | 3 |
| 449 | 15.13 | humidity | 50.0 | 4320 | > th | dose independent | sin | 16 | NA |
| 450 | 15.13 | wind | 1.0 | 4320 | > th | dose independent | rect. | 17 | 2 |
| 455 | 15.13 | humidity | 50.0 | 4320 | > th | dose independent | rect. | 12 | 9 |
| 462 | 15.13 | humidity | 50.0 | 4320 | > th | dose independent | rect. | 12 | 12 |
| 465 | 15.13 | humidity | 50.0 | 4320 | > th | dose independent | rect. | 12 | 18 |
| 473 | 15.14 | humidity | 50.0 | 4320 | > th | dose independent | rect. | 12 | 6 |
| 519 | 15.15 | humidity | 70.0 | 1440 | > th | dose dependent | rect. | 7 | 3 |
| 524 | 15.16 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 18 | 1 |
| 525 | 15.16 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 18 | 1 |
| 535 | 15.16 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 18 | 1 |
| 538 | 15.16 | wind | 1.0 | 43200 | < th | dose dependent | rect. | 9 | 4 |
| 560 | 15.17 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 18 | 1 |
| 562 | 15.17 | wind | 9.0 | 43200 | > th | dose dependent | rect. | 11 | 3 |
| 596 | 15.18 | humidity | 90.0 | 1440 | < th | dose dependent | rect. | 4 | 6 |
| 601 | 15.19 | humidity | 60.0 | 4320 | > th | dose independent | rect. | 16 | 9 |
| 612 | 15.20 | humidity | 60.0 | 14400 | < th | dose independent | sin | 11 | NA |
| 615 | 15.20 | humidity | 60.0 | 4320 | > th | dose independent | rect. | 16 | 4 |
| 654 | 15.21 | temperature | 25.0 | 270 | < th | dose independent | rect. | 23 | 10 |
| 673 | 15.22 | humidity | 60.0 | 720 | > th | dose independent | rect. | 17 | 2 |
| 697 | 15.22 | humidity | 50.0 | 4320 | > th | dose independent | rect. | 15 | 23 |
| 727 | 15.24 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 11 | 6 |
| 728 | 15.24 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 11 | 6 |
| 743 | 15.24 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 11 | 6 |
| 785 | 15.25 | humidity | 90.0 | 1440 | < th | dose dependent | rect. | 11 | 1 |
| 813 | 15.26 | humidity | 50.0 | 4320 | > th | dose independent | rect. | 8 | 13 |
| 815 | 15.26 | humidity | 50.0 | 4320 | > th | dose independent | rect. | 8 | 16 |
| 820 | 15.26 | humidity | 50.0 | 4320 | > th | dose independent | rect. | 8 | 21 |
| 843 | 15.27 | humidity | 50.0 | 4320 | > th | dose independent | no | NA | NA |
| 863 | 15.27 | humidity | 50.0 | 4320 | > th | dose independent | rect. | 5 | 13 |
| 894 | 15.27 | humidity | 50.0 | 4320 | > th | dose independent | rect. | 24 | 18 |
| 966 | 15.28 | humidity | 80.0 | 1440 | < th | dose independent | sin | 4 | NA |
| 968 | 15.28 | wind | 9.0 | 43200 | > th | dose independent | rect. | 12 | 1 |
| 970 | 15.28 | humidity | 70.0 | 720 | > th | dose independent | rect. | 15 | 4 |