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Os02g0192400

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Similar to Myeloid/lymphoid or mixed-lineage leukemia protein 2 (ALL1-related protein). Splice isoform 2.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 9.65 (0.0133) R2 : 0.699
β1 : 1.17 (0.0487) R2dD : 0.396 R2D : 0.308
β2 : 0.715 (0.0346) R2dC : 0.285 R2C : 0.277
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.284 (0.0284) R2dN8 : 0.0887 R2N8 : 0.0101
σ : 0.25
deviance : 28.52
__
_____
C
peak time of C : 6.82
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = radiation, response mode = > th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
25 0.235 9.64 1.23 0.653 -0.408 -0.226 0.895 0.307 9.37 0.46 363 -- --
26.1 0.24 9.66 1.16 0.683 0.267 -0.871 -- 0.272 4.92 0.9707 383 -- --
25.08 0.233 9.64 1.22 0.637 -0.405 -- 0.819 0.308 9.36 0.6623 378 -- --
27.78 0.247 9.65 1.16 0.676 0.173 -- -- 0.279 5.72 0.9707 383 -- --
28.62 0.249 9.64 1.45 -- -0.928 -- 1.23 0.353 -- 0.005581 815 -- --
28.06 0.248 9.65 1.18 0.718 -- -0.451 -- 0.282 6.66 -- -- -- --
28.52 0.25 9.65 1.17 0.715 -- -- -- 0.284 6.82 -- -- -- --
28.66 0.249 9.66 1.31 -- -1 -- -- 0.347 -- 0.05741 843 -- --
60.74 0.363 9.67 -- 0.74 0.239 -- -- 0.185 6.97 30.01 1259 -- --
55.31 0.348 9.66 1.19 -- -- -- -- 0.298 -- -- -- -- --
64.62 0.376 9.68 -- 0.73 -- -- -- 0.154 6.72 -- -- -- --
70.16 0.39 9.65 -- -- -0.885 -- -- 0.231 -- 1.43 803 -- --
92.43 0.449 9.69 -- -- -- -- -- 0.166 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 22.90 temperature 30.0 270 < th dose dependent rect. 15 16
7 23.10 temperature 30.0 90 < th dose dependent rect. 18 15
24 23.32 temperature 25.0 270 < th dose independent rect. 15 17
82 23.59 radiation 10.0 720 < th dose independent rect. 17 1
124 23.82 temperature 20.0 90 > th dose independent rect. 17 11
147 23.89 temperature 10.0 90 > th dose dependent rect. 17 11
154 23.92 wind 1.0 30 > th dose independent rect. 19 14
171 23.95 temperature 20.0 720 > th dose independent rect. 17 1
207 24.05 atmosphere 1000.0 90 > th dose independent rect. 17 11
215 24.08 radiation 1.0 720 < th dose dependent rect. 17 7
223 24.09 atmosphere 995.0 30 > th dose dependent rect. 19 14
230 24.11 temperature 20.0 720 > th dose independent rect. 16 3
247 24.14 atmosphere 1005.0 720 > th dose independent rect. 19 5
261 24.16 radiation 20.0 30 < th dose dependent sin 11 NA
275 24.19 temperature 30.0 270 < th dose dependent sin 12 NA
279 24.20 wind 1.0 30 > th dose independent sin 15 NA
281 24.20 radiation 10.0 30 < th dose independent rect. 8 21
294 24.23 radiation 10.0 30 < th dose independent sin 12 NA
297 24.24 radiation 1.0 270 > th dose independent rect. 7 11
303 24.25 atmosphere 1000.0 30 > th dose independent rect. 9 10
311 24.26 wind 1.0 720 > th dose independent rect. 10 14
334 24.27 atmosphere 1000.0 30 > th dose dependent rect. 14 19
346 24.29 radiation 1.0 270 < th dose independent rect. 2 22
359 24.30 radiation 1.0 270 < th dose dependent rect. 2 22
364 24.31 wind 9.0 90 < th dose dependent rect. 17 11
374 24.34 wind 1.0 270 > th dose independent sin 18 NA
379 24.34 wind 7.0 30 < th dose independent rect. 19 14
381 24.34 temperature 30.0 720 < th dose dependent rect. 19 4
395 24.36 temperature 25.0 720 < th dose independent rect. 15 9
397 24.36 precipitation 0.1 90 < th dose independent rect. 4 13
400 24.36 precipitation 0.1 90 < th dose dependent rect. 4 13
403 24.37 atmosphere 1000.0 720 > th dose independent rect. 17 1
404 24.37 radiation 40.0 720 < th dose independent rect. 14 14
414 24.38 atmosphere 1015.0 90 < th dose independent rect. 17 11
416 24.38 temperature 30.0 720 < th dose dependent rect. 19 2
440 24.40 radiation 20.0 90 < th dose independent rect. 17 11
443 24.40 wind 9.0 90 < th dose independent rect. 4 13
444 24.40 temperature 10.0 90 > th dose independent rect. 4 13
445 24.40 atmosphere 1015.0 90 < th dose independent rect. 4 13
475 24.43 wind 1.0 720 > th dose independent rect. 18 6
480 24.43 atmosphere 1000.0 270 > th dose independent rect. 23 13
489 24.44 radiation 30.0 720 < th dose independent rect. 15 4
491 24.44 radiation 10.0 90 < th dose independent rect. 13 15
495 24.44 temperature 30.0 720 < th dose dependent rect. 15 9
504 24.45 temperature 25.0 10 < th dose dependent sin 13 NA
512 24.46 atmosphere 1005.0 720 > th dose independent rect. 13 12
535 24.47 radiation 30.0 90 < th dose dependent rect. 13 15
544 24.48 precipitation 0.1 90 < th dose independent rect. 19 14
551 24.48 precipitation 0.1 90 < th dose dependent rect. 19 14
555 24.49 wind 9.0 720 < th dose independent rect. 12 18
560 24.50 wind 1.0 43200 < th dose independent rect. 2 3
564 24.50 wind 9.0 90 < th dose independent rect. 17 11
571 24.50 radiation 40.0 90 < th dose dependent rect. 17 11
610 24.52 radiation 10.0 720 < th dose independent rect. 16 11
646 24.54 radiation 10.0 30 < th dose dependent rect. 8 21
648 24.54 radiation 10.0 30 < th dose dependent rect. 6 23
650 24.55 wind 1.0 14400 > th dose independent rect. 2 1
698 24.58 atmosphere 1005.0 720 > th dose independent sin 16 NA
702 24.58 temperature 10.0 90 > th dose independent rect. 9 10
703 24.58 atmosphere 1015.0 90 < th dose independent rect. 9 10
707 24.58 radiation 10.0 90 < th dose independent rect. 15 13
709 24.58 temperature 10.0 90 > th dose independent rect. 19 14
711 24.58 humidity 50.0 90 > th dose independent rect. 19 14
713 24.58 atmosphere 995.0 90 > th dose independent rect. 19 14
715 24.58 radiation 30.0 720 < th dose dependent rect. 17 1
719 24.58 wind 9.0 270 < th dose dependent rect. 15 12
725 24.59 temperature 25.0 720 < th dose independent sin 16 NA
726 24.59 temperature 25.0 720 < th dose independent rect. 19 2
732 24.59 precipitation 0.1 90 < th dose independent rect. 9 10
737 24.59 precipitation 0.1 90 < th dose dependent rect. 9 10
745 24.60 radiation 1.0 270 > th dose independent sin 0 NA
746 24.60 temperature 25.0 720 < th dose independent rect. 17 4
779 24.61 temperature 20.0 90 > th dose independent rect. 9 19
817 24.63 humidity 50.0 90 > th dose independent rect. 17 11
849 24.64 atmosphere 1010.0 720 < th dose independent rect. 17 1
850 24.64 wind 1.0 43200 < th dose independent rect. 2 6
851 24.64 temperature 20.0 270 > th dose independent rect. 21 6
855 24.64 wind 9.0 720 < th dose independent rect. 18 23
868 24.65 temperature 25.0 270 < th dose independent sin 13 NA
870 24.65 precipitation 0.1 720 < th dose independent rect. 5 1
876 24.65 precipitation 0.1 90 < th dose independent rect. 17 11
886 24.65 radiation 40.0 90 < th dose independent rect. 19 14
890 24.65 wind 9.0 720 < th dose independent rect. 19 20
893 24.65 precipitation 0.1 720 < th dose dependent rect. 5 1
897 24.65 precipitation 0.1 90 < th dose dependent rect. 17 11
899 24.65 radiation 30.0 90 < th dose dependent rect. 15 13
902 24.66 wind 9.0 720 < th dose independent rect. 18 6
908 24.66 humidity 50.0 720 > th dose dependent rect. 5 1
909 24.66 wind 1.0 43200 < th dose dependent rect. 2 6
917 24.67 precipitation 0.1 720 < th dose independent rect. 17 1
919 24.67 wind 1.0 43200 > th dose independent rect. 2 6
926 24.67 precipitation 0.1 720 < th dose dependent rect. 17 1
938 24.67 temperature 10.0 90 > th dose dependent rect. 9 19
940 24.68 wind 1.0 43200 > th dose independent rect. 2 3
942 24.68 wind 1.0 30 > th dose independent rect. 9 10
943 24.68 humidity 50.0 30 > th dose independent rect. 9 10
968 24.69 radiation 1.0 720 < th dose independent rect. 17 7
986 24.70 temperature 10.0 270 > th dose independent rect. 7 11
987 24.70 atmosphere 1015.0 270 < th dose independent rect. 7 11
988 24.70 precipitation 0.1 270 < th dose independent rect. 7 11
994 24.70 atmosphere 995.0 90 > th dose independent rect. 4 13
1000 24.70 atmosphere 995.0 720 > th dose independent rect. 24 18