BLASTP 2.2.23 [Feb-03-2010]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Os02g0192400 Os02g0192400|AK072184
         (929 letters)

Database: rap3 
           52,214 sequences; 17,035,801 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Os02g0192400  Similar to Myeloid/lymphoid or mixed-lineage l...  1897   0.0  
Os01g0883400                                                       77   7e-14
Os01g0547200  Zinc finger, FYVE/PHD-type domain containing p...    70   8e-12

>Os02g0192400 Similar to Myeloid/lymphoid or mixed-lineage leukemia protein 2
           (ALL1-related protein). Splice isoform 2
          Length = 929

 Score = 1897 bits (4914), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 918/929 (98%), Positives = 918/929 (98%)

Query: 1   MVVALSQSFESLYKTEVLDLVEKFDKYLSDKNAGSEMHEELHDILTAANSLPKAPWEDGV 60
           MVVALSQSFESLYKTEVLDLVEKFDKYLSDKNAGSEMHEELHDILTAANSLPKAPWEDGV
Sbjct: 1   MVVALSQSFESLYKTEVLDLVEKFDKYLSDKNAGSEMHEELHDILTAANSLPKAPWEDGV 60

Query: 61  CKVCGIDRDDDSVLLCDKCDSEYHTYCLNPPLARIPEGNWYCPSCMLGQTKAHHDQGVQD 120
           CKVCGIDRDDDSVLLCDKCDSEYHTYCLNPPLARIPEGNWYCPSCMLGQTKAHHDQGVQD
Sbjct: 61  CKVCGIDRDDDSVLLCDKCDSEYHTYCLNPPLARIPEGNWYCPSCMLGQTKAHHDQGVQD 120

Query: 121 VKRQQKKFVGEEAHAFQEELNKLATAMEEKEYWDLNMQERIYLLKFLCDEMLNTALIREH 180
           VKRQQKKFVGEEAHAFQEELNKLATAMEEKEYWDLNMQERIYLLKFLCDEMLNTALIREH
Sbjct: 121 VKRQQKKFVGEEAHAFQEELNKLATAMEEKEYWDLNMQERIYLLKFLCDEMLNTALIREH 180

Query: 181 LDQCSDKLGDLQQKFRASNFELKDLKYKEEMRTSYARQSRSSKTEQHFNNSSGPVENQQQ 240
           LDQCSDKLGDLQQKFRASNFELKDLKYKEEMRTSYARQSRSSKTEQHFNNSSGPVENQQQ
Sbjct: 181 LDQCSDKLGDLQQKFRASNFELKDLKYKEEMRTSYARQSRSSKTEQHFNNSSGPVENQQQ 240

Query: 241 CTPTALDHLEEAEQGNVGVNLNNPADGVPDGQLNVGKPYKSDKDISSASMVEERKSSGLS 300
           CTPTALDHLEEAEQGNVGVNLNNPADGVPDGQLNVGKPYKSDKDISSASMVEERKSSGLS
Sbjct: 241 CTPTALDHLEEAEQGNVGVNLNNPADGVPDGQLNVGKPYKSDKDISSASMVEERKSSGLS 300

Query: 301 EQPSGMAIDQIDGDAIDEGSQSCEKRSLGAKSSTCDNLNLKDTEFSTPGRELPDERASTS 360
           EQPSGMAIDQIDGDAIDEGSQSCEKRSLGAKSSTCDNLNLKDTEFSTPGRELPDERASTS
Sbjct: 301 EQPSGMAIDQIDGDAIDEGSQSCEKRSLGAKSSTCDNLNLKDTEFSTPGRELPDERASTS 360

Query: 361 FQDNLEASSTKSIELDADNNEMDTLSDDISKLQDSISLLESQINMASSRRECLGKDSIGR 420
           FQDNLEASSTKSIELDADNNEMDTLSDDISKLQDSISLLESQINMASSRRECLGKDSIGR
Sbjct: 361 FQDNLEASSTKSIELDADNNEMDTLSDDISKLQDSISLLESQINMASSRRECLGKDSIGR 420

Query: 421 LYWVIGRPGKRPWLVADGSMLKPKERDISMVNSYPPSAFDCKGWNSASIFIYESDEEIQC 480
           LYWVIGRPGKRPWLVADGSMLKPKERDISMVNSYPPSAFDCKGWNSASIFIYESDEEIQC
Sbjct: 421 LYWVIGRPGKRPWLVADGSMLKPKERDISMVNSYPPSAFDCKGWNSASIFIYESDEEIQC 480

Query: 481 LLDWLRDYDPREKELKDSILQWQRHFCHQSSSPLVDPPISGPKGEQLMELPNTKAAVILE 540
           LLDWLRDYDPREKELKDSILQWQRHFCHQSSSPLVDPPISGPKGEQLMELPNTKAAVILE
Sbjct: 481 LLDWLRDYDPREKELKDSILQWQRHFCHQSSSPLVDPPISGPKGEQLMELPNTKAAVILE 540

Query: 541 QKYGLQLDQDTSDLPKKRGKKIKLSSEDRTYRCDCLEPVWPSRYHCLTCHETYLISTEFE 600
           QKYGLQLDQDTSDLPKKRGKKIKLSSEDRTYRCDCLEPVWPSRYHCLTCHETYLISTEFE
Sbjct: 541 QKYGLQLDQDTSDLPKKRGKKIKLSSEDRTYRCDCLEPVWPSRYHCLTCHETYLISTEFE 600

Query: 601 GHNDGKCSKIHQSPDESRENDEPKVKVTKSDTKEKDSLECSSVIEPSSDRKLMQCPYDFE 660
           GHNDGKCSKIHQSPDESRENDEPKVKVTKSDTKEKDSLECSSVIEPSSDRKLMQCPYDFE
Sbjct: 601 GHNDGKCSKIHQSPDESRENDEPKVKVTKSDTKEKDSLECSSVIEPSSDRKLMQCPYDFE 660

Query: 661 EICRKFVTNDSNKETVKQIGLNGSNGVPSFVPSPAFFLEPAIVQSQNRKDDELKDWTSSL 720
           EICRKFVTNDSNKETVKQIGLNGSNGVPSFVPSPAFFLEPAIVQSQNRKDDELKDWTSSL
Sbjct: 661 EICRKFVTNDSNKETVKQIGLNGSNGVPSFVPSPAFFLEPAIVQSQNRKDDELKDWTSSL 720

Query: 721 EECNAMSAQKLVQEVSKSGQSCPGNVGDEKVQKSKKPTPDNTSGEEAHSTTGKPTRLLAV 780
           EECNAMSAQKLVQEVSKSGQSCPGNVGDEKVQKSKKPTPDNTSGEEAHSTTGKPTRLLAV
Sbjct: 721 EECNAMSAQKLVQEVSKSGQSCPGNVGDEKVQKSKKPTPDNTSGEEAHSTTGKPTRLLAV 780

Query: 781 NGGLVPESSLRPLIGRNSHILKQQKINLLDIEAALPEEALRASKCQQIRRRSWRAFVKDA 840
           NGGLVPESSLRPLIGRNSHILKQQKINLLDIEAALPEEALRASKCQQIRRRSWRAFVKDA
Sbjct: 781 NGGLVPESSLRPLIGRNSHILKQQKINLLDIEAALPEEALRASKCQQIRRRSWRAFVKDA 840

Query: 841 ESISQMVLAANLLEGMIKAEFLKNDWWYWSSFTAAMKTSTVSSLALRVYTLDDCIIYSKD 900
           ESISQMVLAANLLEGMIKAEFLKNDWWYWSSFTAAMKTSTVSSLALRVYTLDDCIIYSKD
Sbjct: 841 ESISQMVLAANLLEGMIKAEFLKNDWWYWSSFTAAMKTSTVSSLALRVYTLDDCIIYSKD 900

Query: 901 QVPSVEPADNTXXXXXXXXXXXELESLAS 929
           QVPSVEPADNT           ELESLAS
Sbjct: 901 QVPSVEPADNTRSGNRGGRRRRELESLAS 929



>Os01g0883400 
          Length = 224

 Score = 77.0 bits (188), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 28/52 (53%), Positives = 39/52 (75%)

Query: 60  VCKVCGIDRDDDSVLLCDKCDSEYHTYCLNPPLARIPEGNWYCPSCMLGQTK 111
           +C+VC +DRDD+ ++LCD CD  YH YCL PPL  +PEG W+C SC++ + K
Sbjct: 105 LCRVCKVDRDDEQIILCDGCDEGYHLYCLIPPLTLVPEGEWHCSSCIVQEEK 156



>Os01g0547200 Zinc finger, FYVE/PHD-type domain containing protein
          Length = 375

 Score = 70.1 bits (170), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 30/68 (44%), Positives = 42/68 (61%), Gaps = 3/68 (4%)

Query: 60  VCKVCGIDRDDDSVLLCDKCDSEYHTYCLNPPLARIPEGNWYCPSCMLGQTK---AHHDQ 116
           +C+VC  DRDDD  +LCD CD  YH YC+ P    IP+G WYC SC + + K   A H++
Sbjct: 277 LCRVCHSDRDDDLTILCDGCDEAYHLYCITPRRTSIPKGKWYCSSCAIERAKEGMARHEK 336

Query: 117 GVQDVKRQ 124
            +  + R+
Sbjct: 337 RMLKLHRK 344



  Database: rap3
    Posted date:  Nov 19, 2010  6:03 PM
  Number of letters in database: 17,035,801
  Number of sequences in database:  52,214
  
Lambda     K      H
   0.312    0.129    0.379 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 32,403,977
Number of extensions: 1458083
Number of successful extensions: 3630
Number of sequences better than 1.0e-10: 3
Number of HSP's gapped: 3633
Number of HSP's successfully gapped: 3
Length of query: 929
Length of database: 17,035,801
Length adjustment: 110
Effective length of query: 819
Effective length of database: 11,292,261
Effective search space: 9248361759
Effective search space used: 9248361759
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 161 (66.6 bits)