BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os02g0192400 Os02g0192400|AK072184
(929 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT3G01460.1 | chr3:173316-182038 FORWARD LENGTH=2177 498 e-141
AT1G77250.1 | chr1:29020444-29022938 REVERSE LENGTH=523 67 4e-11
AT5G44800.1 | chr5:18083659-18092162 REVERSE LENGTH=2224 62 1e-09
AT5G24330.1 | chr5:8295245-8296997 REVERSE LENGTH=350 62 1e-09
AT3G05670.1 | chr3:1653888-1657022 FORWARD LENGTH=884 61 3e-09
AT5G09790.2 | chr5:3039204-3040970 REVERSE LENGTH=380 58 2e-08
AT5G35210.1 | chr5:13474499-13482238 REVERSE LENGTH=1707 51 3e-06
AT4G14700.1 | chr4:8422236-8424665 FORWARD LENGTH=810 51 3e-06
AT5G22760.1 | chr5:7571635-7577662 FORWARD LENGTH=1567 51 3e-06
AT4G12620.1 | chr4:7459812-7462253 REVERSE LENGTH=814 50 6e-06
>AT3G01460.1 | chr3:173316-182038 FORWARD LENGTH=2177
Length = 2176
Score = 498 bits (1283), Expect = e-141, Method: Compositional matrix adjust.
Identities = 349/948 (36%), Positives = 518/948 (54%), Gaps = 75/948 (7%)
Query: 1 MVVALSQSFESLYKTEVLDLVEKFDKYLSDKNAGSEMHEELHDILTAANSLPKAPWEDGV 60
+V LS+ F+SLY+ EV+ LV+K Y + +EM +E+ DI+ + N LPKAPW++GV
Sbjct: 1230 LVATLSEKFKSLYEAEVVPLVQKLKDYRKLECLSAEMKKEIKDIVVSVNKLPKAPWDEGV 1289
Query: 61 CKVCGIDRDDDSVLLCDKCDSEYHTYCLNPPLARIPEGNWYCPSCMLGQTKAHHD-QGVQ 119
CKVCG+D+DDDSVLLCD CD+EYHTYCLNPPL RIP+GNWYCPSC++ + A + +
Sbjct: 1290 CKVCGVDKDDDSVLLCDTCDAEYHTYCLNPPLIRIPDGNWYCPSCVIAKRMAQEALESYK 1349
Query: 120 DVKRQQ-KKFVGEEAHAFQEELNKLATAMEEKEYWDLNMQERIYLLKFLCDEMLNTALIR 178
V+R++ +K+ GE A E LA MEEK+YW+ + +ERI LLK LCDE+L+++L+
Sbjct: 1350 LVRRRKGRKYQGELTRASMELTAHLADVMEEKDYWEFSAEERILLLKLLCDELLSSSLVH 1409
Query: 179 EHLDQCSDKLGDLQQKFRASNFELKDLKYKEEMRTS-YARQSRSSKTEQHFNNSSGPVEN 237
+HL+QC++ + ++QQK R+ + E K+ K ++E T+ A+ S E ++S +
Sbjct: 1410 QHLEQCAEAIIEMQQKLRSLSSEWKNAKMRQEFLTAKLAKVEPSILKEVGEPHNSSYFAD 1469
Query: 238 QQQCTPTALDHLEEAEQGNVGVNLNNPADGVPDGQLNVGKPYKSDKDISSASMVEERKSS 297
Q C P P +GV DG + D+ S+A + + + S
Sbjct: 1470 QMGCDP-------------------QPQEGVGDGVT------RDDETSSTAYLNKNQGKS 1504
Query: 298 GLS--EQPSGMAIDQIDGDAIDEGSQSCEKRSLGAKSST----CDNLNLKDTE---FSTP 348
L QP ++ + + S R + T DNL KDT +
Sbjct: 1505 PLETDTQPGESHVNFGESKISSPETISSPGRHELPIADTSPLVTDNLPEKDTSETLLKSV 1564
Query: 349 GR----ELPDERASTSFQDNLEASSTKSIELDADNNEMDTLSDDISKLQDSISLLESQIN 404
GR P+ A +ASS S EL A ++ S++I LQ SI +ESQ+
Sbjct: 1565 GRNHETHSPNSNA-VELPTAHDASSQASQELQACQQDLSATSNEIQNLQQSIRSIESQLL 1623
Query: 405 MASSRRECLGKDSIGRLYWVIGRPGKRPWLVADGSMLKPKERDISMVNSYPPSAF----D 460
S RR+ LG D+ GRLYW P + P ++ DGS+ K ++ S PS F D
Sbjct: 1624 KQSIRRDFLGTDASGRLYWGCCFPDENPRILVDGSISLQKPVQADLIGSKVPSPFLHTVD 1683
Query: 461 CKGWNSASIFIYESDEEIQCLLDWLRDYDPREKELKDSILQWQR-HFCHQSSSPLVDPPI 519
+ YE++ EI L+ WL D D +E++L++SIL W+R + +
Sbjct: 1684 HGRLRLSPWTYYETETEISELVQWLHDDDLKERDLRESILWWKRLRYGDVQKEKKQAQNL 1743
Query: 520 SGPKGEQLMELPNTKAAVILEQKYG--LQLDQDTSDLPKKRGKKIKLSSEDRTYRCDCLE 577
S P +E TKAA+ +E++YG ++L+ +T KKRGKK K++ ++ RC+CLE
Sbjct: 1744 SAPVFATGLE---TKAAMSMEKRYGPCIKLEMETL---KKRGKKTKVAEREKLCRCECLE 1797
Query: 578 PVWPSRYHCLTCHETYLISTEFEGHNDGKCSKIHQSPDESRE-NDEPKVKVT-KSD---- 631
+ PS HCL CH+T+ EFE H + KC + +E ++ +D K K + KSD
Sbjct: 1798 SILPSMIHCLICHKTFASDDEFEDHTESKCIPYSLATEEGKDISDSSKAKESLKSDYLNV 1857
Query: 632 --TKEKDSLECSSVIEPSSDRKLMQ-----CPYDFEEICRKFVTNDSNKETVKQIGLNGS 684
+ KD E S+V E S Q PY FEEIC KFVT D N++ VK+IGL S
Sbjct: 1858 KSSAGKDVAEISNVSELDSGLIRYQEEESISPYHFEEICSKFVTKDCNRDLVKEIGLISS 1917
Query: 685 NGVPSFVPSPAFFLEPAIVQSQNRKDDELKDWTSSLEECNAMSAQKLVQEV-SKSGQSCP 743
NG+P+F+PS + L +++ S D S ++ + V+ + S+S S
Sbjct: 1918 NGIPTFLPSSSTHLNDSVLISAKSNK---PDGGDSGDQVIFAGPETNVEGLNSESNMSFD 1974
Query: 744 GNVGDEKVQKSKKPTPDNTSGEEAHSTTGKPTRLLAVNGGLVPESSLRPLIGRNSHILKQ 803
+V D KP+ E + + L + +VP+++L+ + G+ +
Sbjct: 1975 RSVTDSHGGPLDKPSGLGFGFSEQKNKKSSGSGLKSC--CVVPQAALKRVTGKALPGFRF 2032
Query: 804 QKINLLDIEAALPEEALRASKCQQIRRRSWRAFVKDAESISQMVLAANLLEGMIKAEFLK 863
K NLLD++ ALPEEALR SK RRR+WR FVK ++SI ++V A ++E MIK E+LK
Sbjct: 2033 LKTNLLDMDVALPEEALRPSKSHPNRRRAWRVFVKSSQSIYELVQATIVVEDMIKTEYLK 2092
Query: 864 NDWWYWSSFTAAMKTSTVSSLALRVYTLDDCIIYSKDQVPSVEPADNT 911
N+WWYWSS +AA K ST+S+L++R+++LD IIY K PS P D T
Sbjct: 2093 NEWWYWSSLSAAAKISTLSALSVRIFSLDAAIIYDKPITPS-NPIDET 2139
>AT1G77250.1 | chr1:29020444-29022938 REVERSE LENGTH=523
Length = 522
Score = 67.4 bits (163), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 22/46 (47%), Positives = 31/46 (67%)
Query: 60 VCKVCGIDRDDDSVLLCDKCDSEYHTYCLNPPLARIPEGNWYCPSC 105
+C+ C D+DDD ++LCD CD YH YC+ PP +P G W+C +C
Sbjct: 404 LCRNCLTDKDDDKIVLCDGCDDAYHIYCMRPPCESVPNGEWFCTAC 449
>AT5G44800.1 | chr5:18083659-18092162 REVERSE LENGTH=2224
Length = 2223
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 24/45 (53%), Positives = 27/45 (60%), Gaps = 3/45 (6%)
Query: 61 CKVCGIDRDDDSVLLCDKCDSEYHTYCLNPPLARIPEGNWYCPSC 105
C +C + D +L CD C YHT CLNPPL RIP G W CP C
Sbjct: 78 CVICDLGGD---LLCCDSCPRTYHTACLNPPLKRIPNGKWICPKC 119
>AT5G24330.1 | chr5:8295245-8296997 REVERSE LENGTH=350
Length = 349
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 22/46 (47%), Positives = 31/46 (67%)
Query: 60 VCKVCGIDRDDDSVLLCDKCDSEYHTYCLNPPLARIPEGNWYCPSC 105
VC+ C + +LLCDKCD +H +CL P L +P+G+W+CPSC
Sbjct: 34 VCEECSSGKQPAKLLLCDKCDKGFHLFCLRPILVSVPKGSWFCPSC 79
>AT3G05670.1 | chr3:1653888-1657022 FORWARD LENGTH=884
Length = 883
Score = 61.2 bits (147), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 27/52 (51%), Positives = 33/52 (63%), Gaps = 3/52 (5%)
Query: 55 PWEDGVCKVCGIDRDDDSVLLCDKCDSEYHTYCLNPPLAR-IPEGNWYCPSC 105
P+E+ +C C DD +LLCD CDS HTYC+ L R +PEGNWYC C
Sbjct: 500 PYENIICTECHQGDDDGLMLLCDLCDSSAHTYCVG--LGREVPEGNWYCEGC 549
>AT5G09790.2 | chr5:3039204-3040970 REVERSE LENGTH=380
Length = 379
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 22/50 (44%), Positives = 29/50 (58%)
Query: 56 WEDGVCKVCGIDRDDDSVLLCDKCDSEYHTYCLNPPLARIPEGNWYCPSC 105
+ + C+ CG DD +LLCDKCD +H CL P + R+P G W C C
Sbjct: 62 YSNVTCEKCGSGEGDDELLLCDKCDRGFHMKCLRPIVVRVPIGTWLCVDC 111
>AT5G35210.1 | chr5:13474499-13482238 REVERSE LENGTH=1707
Length = 1706
Score = 51.2 bits (121), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/111 (25%), Positives = 51/111 (45%), Gaps = 12/111 (10%)
Query: 61 CKVCGIDRDDDSVLLCDKCDSEYHTYCLNPPLARIPEGNWYCPSCMLGQT--KAHHDQGV 118
C++CG+D ++L CD C YH+ C+ IP+G W+CP C + + K H +
Sbjct: 414 CRICGMD---GTLLCCDGCPLAYHSRCIGVVKMYIPDGPWFCPECTINKKGPKIAHGTSL 470
Query: 119 QDVKR-----QQKKFVGEEAHAFQEELNKLATAMEEKEYWDLNMQERIYLL 164
+ + + F+G H LN +Y+++N ++ L+
Sbjct: 471 RGAVQFGMDPHGRLFLGTCNHLLV--LNISVNGDAVVKYYNVNDISKVVLV 519
>AT4G14700.1 | chr4:8422236-8424665 FORWARD LENGTH=810
Length = 809
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 30/110 (27%), Positives = 54/110 (49%), Gaps = 11/110 (10%)
Query: 61 CKVCGIDRDDDSVLLCDKCDSEYHTYCLNPPLARIPEGNWYCPSCML---GQTKA---HH 114
C++C + ++ CD C +H CL PPL +PEG+W C C + GQT
Sbjct: 166 CQICFKSHTNTIMIECDDCLGGFHLNCLKPPLKEVPEGDWICQFCEVKKSGQTLVVVPKP 225
Query: 115 DQGVQDVKRQQKKFVGEEAHAFQEELNKLATAMEEKEYWDLNMQERIYLL 164
+G + + ++K + + A + E KL +++ YW ++ R Y++
Sbjct: 226 PEGKKLARTMKEKLLSSDLWAARIE--KLWKEVDDGVYW---IRARWYMI 270
>AT5G22760.1 | chr5:7571635-7577662 FORWARD LENGTH=1567
Length = 1566
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 28/47 (59%), Gaps = 3/47 (6%)
Query: 61 CKVCGIDRDDDSVLLCDKCDSEYHTYCLNPPLARIPEGNWYCPSCML 107
C++CG+D ++L CD C YH+ C+ IP+G WYCP C +
Sbjct: 416 CRLCGMD---GTLLCCDGCPLAYHSRCIGVVKMYIPDGPWYCPECTI 459
>AT4G12620.1 | chr4:7459812-7462253 REVERSE LENGTH=814
Length = 813
Score = 50.1 bits (118), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 29/111 (26%), Positives = 57/111 (51%), Gaps = 13/111 (11%)
Query: 61 CKVCGIDRDDDSVLLCDKCDSEYHTYCLNPPLARIPEGNWYCPSCML---GQTKA----H 113
C++C D + ++ CD C +H CL PPL +PEG+W C C + GQ++
Sbjct: 169 CQIC-FKSDTNIMIECDDCLGGFHLKCLKPPLKEVPEGDWICQFCEVKKSGQSQTLDLPK 227
Query: 114 HDQGVQDVKRQQKKFVGEEAHAFQEELNKLATAMEEKEYWDLNMQERIYLL 164
+G + + ++K + + A + ++KL +++ YW ++ R Y++
Sbjct: 228 PPEGKKLARTMREKLLSGDLWAAR--IDKLWKEVDDGVYW---IRARWYMI 273
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.312 0.129 0.379
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 21,360,786
Number of extensions: 989037
Number of successful extensions: 3150
Number of sequences better than 1.0e-05: 13
Number of HSP's gapped: 3157
Number of HSP's successfully gapped: 14
Length of query: 929
Length of database: 11,106,569
Length adjustment: 108
Effective length of query: 821
Effective length of database: 8,145,641
Effective search space: 6687571261
Effective search space used: 6687571261
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 116 (49.3 bits)