Os02g0177700
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Protein of unknown function DUF588 family protein.
FiT-DB / Search/ Help/ Sample detail
|
Os02g0177700 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Protein of unknown function DUF588 family protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 83.35 | 0.429 | 12.5 | -2.08 | 0.894 | 1.3 | 0.656 | -2.92 | -0.0506 | 0.569 | 21.01 | 1410 | -- | -- |
| 90.96 | 0.444 | 12.4 | -1.52 | 0.964 | 1.28 | 0.473 | -- | 0.0495 | 0.867 | 17.1 | 7869 | -- | -- |
| 85.05 | 0.43 | 12.5 | -2.12 | 0.89 | 1.3 | -- | -2.95 | -0.0485 | 0.507 | 21.4 | 1406 | -- | -- |
| 90.26 | 0.442 | 12.4 | -1.27 | 0.819 | 1.4 | -- | -- | 0.16 | 0.451 | 17.09 | 1282 | -- | -- |
| 115.51 | 0.501 | 12.5 | -2.17 | -- | 1.75 | -- | -3.45 | -0.0782 | -- | 21.46 | 1028 | -- | -- |
| 131.7 | 0.538 | 12.3 | -0.783 | 0.977 | -- | 0.625 | -- | 0.463 | 0.709 | -- | -- | -- | -- |
| 133.36 | 0.541 | 12.3 | -0.807 | 0.976 | -- | -- | -- | 0.46 | 0.672 | -- | -- | -- | -- |
| 119.02 | 0.508 | 12.4 | -1.36 | -- | 1.97 | -- | -- | 0.126 | -- | 16.2 | 984 | -- | -- |
| 126.66 | 0.524 | 12.4 | -- | 0.857 | 0.835 | -- | -- | 0.38 | 0.4 | 21.01 | 1270 | -- | -- |
| 192.96 | 0.649 | 12.3 | -0.772 | -- | -- | -- | -- | 0.477 | -- | -- | -- | -- | -- |
| 150.5 | 0.574 | 12.3 | -- | 0.963 | -- | -- | -- | 0.55 | 0.632 | -- | -- | -- | -- |
| 161.06 | 0.591 | 12.3 | -- | -- | 1.22 | -- | -- | 0.359 | -- | 20.98 | 990 | -- | -- |
| 208.67 | 0.674 | 12.3 | -- | -- | -- | -- | -- | 0.563 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 80.07 | humidity | 90 | 43200 | > th | dose dependent | rect. | 21 | 2 |
| 4 | 80.45 | humidity | 90 | 43200 | > th | dose independent | rect. | 22 | 1 |
| 6 | 80.54 | humidity | 90 | 43200 | < th | dose independent | rect. | 22 | 1 |
| 10 | 81.03 | humidity | 90 | 43200 | > th | dose independent | rect. | 20 | 3 |
| 14 | 81.33 | humidity | 90 | 43200 | < th | dose independent | rect. | 20 | 3 |
| 32 | 82.30 | humidity | 90 | 43200 | > th | dose dependent | rect. | 3 | 21 |
| 35 | 82.36 | temperature | 20 | 1440 | > th | dose dependent | rect. | 13 | 18 |
| 72 | 82.68 | temperature | 20 | 1440 | > th | dose dependent | sin | 15 | NA |
| 76 | 82.72 | temperature | 25 | 1440 | < th | dose independent | rect. | 8 | 16 |
| 86 | 82.79 | humidity | 90 | 43200 | > th | dose dependent | rect. | 8 | 18 |
| 95 | 82.87 | temperature | 25 | 1440 | > th | dose independent | rect. | 9 | 15 |
| 101 | 82.89 | humidity | 90 | 43200 | > th | dose dependent | rect. | 16 | 21 |
| 110 | 82.94 | temperature | 20 | 1440 | > th | dose dependent | rect. | 16 | 7 |
| 143 | 83.05 | humidity | 90 | 43200 | > th | dose dependent | no | NA | NA |
| 152 | 83.07 | temperature | 25 | 1440 | < th | dose independent | rect. | 6 | 18 |
| 184 | 83.19 | humidity | 90 | 43200 | > th | dose dependent | sin | 17 | NA |
| 188 | 83.19 | humidity | 90 | 43200 | > th | dose dependent | rect. | 8 | 23 |
| 196 | 83.21 | humidity | 90 | 43200 | > th | dose dependent | rect. | 3 | 10 |
| 201 | 83.23 | humidity | 90 | 43200 | > th | dose independent | rect. | 3 | 21 |
| 218 | 83.28 | radiation | 1 | 43200 | > th | dose independent | rect. | 17 | 2 |
| 229 | 83.28 | humidity | 90 | 43200 | > th | dose dependent | sin | 3 | NA |
| 231 | 83.28 | humidity | 90 | 43200 | > th | dose dependent | rect. | 4 | 7 |
| 245 | 83.31 | humidity | 80 | 43200 | > th | dose dependent | rect. | 18 | 1 |
| 247 | 83.32 | humidity | 80 | 43200 | > th | dose independent | rect. | 12 | 1 |
| 264 | 83.36 | radiation | 1 | 43200 | < th | dose dependent | rect. | 17 | 2 |
| 274 | 83.38 | temperature | 25 | 1440 | > th | dose independent | rect. | 5 | 18 |
| 287 | 83.40 | humidity | 80 | 43200 | < th | dose independent | rect. | 12 | 1 |
| 315 | 83.48 | humidity | 90 | 43200 | > th | dose dependent | rect. | 5 | 2 |
| 338 | 83.54 | temperature | 25 | 1440 | < th | dose independent | rect. | 14 | 9 |
| 367 | 83.59 | humidity | 90 | 43200 | < th | dose independent | rect. | 9 | 17 |
| 380 | 83.62 | temperature | 25 | 1440 | > th | dose independent | rect. | 14 | 9 |
| 395 | 83.65 | humidity | 90 | 43200 | > th | dose independent | rect. | 17 | 20 |
| 401 | 83.66 | radiation | 1 | 43200 | < th | dose independent | rect. | 17 | 2 |
| 409 | 83.67 | radiation | 1 | 43200 | < th | dose independent | rect. | 17 | 10 |
| 463 | 83.75 | humidity | 90 | 43200 | > th | dose independent | rect. | 9 | 16 |
| 472 | 83.76 | temperature | 25 | 1440 | < th | dose independent | sin | 18 | NA |
| 488 | 83.80 | wind | 7 | 43200 | > th | dose independent | rect. | 5 | 16 |
| 492 | 83.81 | temperature | 25 | 1440 | > th | dose independent | sin | 18 | NA |
| 493 | 83.81 | wind | 7 | 43200 | < th | dose independent | rect. | 5 | 16 |
| 498 | 83.82 | humidity | 90 | 43200 | > th | dose independent | rect. | 8 | 18 |
| 509 | 83.84 | humidity | 90 | 43200 | < th | dose independent | sin | 18 | NA |
| 532 | 83.88 | radiation | 1 | 43200 | < th | dose dependent | sin | 14 | NA |
| 545 | 83.91 | wind | 5 | 43200 | > th | dose dependent | rect. | 9 | 12 |
| 564 | 83.93 | radiation | 1 | 43200 | < th | dose dependent | rect. | 17 | 22 |
| 582 | 83.96 | humidity | 90 | 43200 | < th | dose independent | rect. | 3 | 22 |
| 596 | 83.99 | radiation | 1 | 43200 | > th | dose independent | rect. | 9 | 1 |
| 597 | 83.99 | wind | 7 | 43200 | < th | dose independent | rect. | 5 | 13 |
| 613 | 84.01 | humidity | 90 | 43200 | > th | dose independent | no | NA | NA |
| 619 | 84.01 | radiation | 1 | 43200 | < th | dose dependent | rect. | 12 | 21 |
| 621 | 84.02 | wind | 7 | 43200 | > th | dose independent | rect. | 5 | 13 |
| 646 | 84.03 | radiation | 1 | 43200 | < th | dose dependent | rect. | 7 | 12 |
| 657 | 84.03 | radiation | 1 | 43200 | < th | dose dependent | rect. | 6 | 23 |
| 675 | 84.05 | radiation | 1 | 43200 | < th | dose independent | rect. | 9 | 1 |
| 679 | 84.05 | wind | 5 | 43200 | > th | dose dependent | rect. | 10 | 6 |
| 723 | 84.08 | wind | 7 | 43200 | > th | dose independent | rect. | 5 | 11 |
| 729 | 84.08 | humidity | 90 | 43200 | > th | dose independent | rect. | 8 | 23 |
| 748 | 84.09 | wind | 5 | 43200 | > th | dose dependent | sin | 21 | NA |
| 752 | 84.09 | radiation | 1 | 43200 | < th | dose dependent | rect. | 13 | 16 |
| 787 | 84.12 | wind | 7 | 43200 | < th | dose independent | sin | 0 | NA |
| 821 | 84.14 | wind | 7 | 43200 | > th | dose independent | sin | 0 | NA |
| 822 | 84.14 | humidity | 90 | 43200 | > th | dose independent | sin | 18 | NA |
| 902 | 84.16 | radiation | 1 | 43200 | < th | dose dependent | no | NA | NA |
| 925 | 84.17 | wind | 5 | 43200 | > th | dose dependent | rect. | 9 | 9 |
| 980 | 84.22 | radiation | 1 | 43200 | < th | dose dependent | rect. | 10 | 19 |
| 988 | 84.23 | humidity | 90 | 43200 | > th | dose independent | rect. | 11 | 23 |
| 989 | 84.23 | humidity | 90 | 43200 | > th | dose independent | rect. | 22 | 23 |
| 999 | 84.24 | radiation | 1 | 43200 | > th | dose independent | rect. | 8 | 5 |