Os02g0175900
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os02g0175900 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = precipitation,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 66.93 | 0.384 | 8.34 | 0.384 | 0.689 | -0.942 | -0.559 | 0.304 | -0.33 | 9.43 | 0.3061 | 5940 | -- | -- |
| 66.98 | 0.381 | 8.35 | 0.389 | 0.696 | -0.894 | -0.539 | -- | -0.321 | 9.39 | 0.3275 | 5930 | -- | -- |
| 67.95 | 0.384 | 8.34 | 0.379 | 0.694 | -0.941 | -- | 0.417 | -0.31 | 9.58 | 0.3553 | 5940 | -- | -- |
| 68.09 | 0.384 | 8.35 | 0.368 | 0.688 | -0.881 | -- | -- | -0.321 | 9.55 | 0.3306 | 5936 | -- | -- |
| 95.77 | 0.456 | 8.35 | 0.346 | -- | -0.977 | -- | 0.626 | -0.317 | -- | 0.3962 | 6000 | -- | -- |
| 83.94 | 0.43 | 8.33 | 0.139 | 0.696 | -- | -0.511 | -- | -0.22 | 9.39 | -- | -- | -- | -- |
| 84.84 | 0.431 | 8.33 | 0.121 | 0.696 | -- | -- | -- | -0.219 | 9.56 | -- | -- | -- | -- |
| 95.95 | 0.456 | 8.36 | 0.397 | -- | -0.899 | -- | -- | -0.308 | -- | 0.3767 | 6001 | -- | -- |
| 71.25 | 0.393 | 8.36 | -- | 0.686 | -0.772 | -- | -- | -0.345 | 9.55 | 0.2543 | 5936 | -- | -- |
| 113.44 | 0.498 | 8.34 | 0.116 | -- | -- | -- | -- | -0.218 | -- | -- | -- | -- | -- |
| 85.23 | 0.432 | 8.33 | -- | 0.696 | -- | -- | -- | -0.233 | 9.54 | -- | -- | -- | -- |
| 99.19 | 0.464 | 8.37 | -- | -- | -0.783 | -- | -- | -0.348 | -- | 0.3147 | 6000 | -- | -- |
| 113.8 | 0.498 | 8.35 | -- | -- | -- | -- | -- | -0.231 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 67.86 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 24 | 18 |
| 2 | 67.93 | temperature | 30.0 | 720 | > th | dose independent | rect. | 9 | 8 |
| 45 | 68.33 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 17 | 4 |
| 47 | 68.39 | temperature | 30.0 | 720 | > th | dose independent | sin | 2 | NA |
| 85 | 68.61 | temperature | 30.0 | 720 | < th | dose independent | rect. | 6 | 23 |
| 86 | 68.69 | humidity | 80.0 | 4320 | < th | dose independent | rect. | 18 | 2 |
| 89 | 68.77 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 17 | 10 |
| 98 | 68.89 | temperature | 30.0 | 720 | < th | dose independent | rect. | 7 | 17 |
| 106 | 69.01 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 17 | 4 |
| 109 | 69.01 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 17 | 4 |
| 114 | 69.06 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 17 | 4 |
| 118 | 69.11 | temperature | 25.0 | 4320 | > th | dose dependent | rect. | 2 | 5 |
| 130 | 69.23 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 4 | 14 |
| 131 | 69.23 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 4 | 14 |
| 133 | 69.26 | temperature | 30.0 | 720 | < th | dose independent | sin | 21 | NA |
| 134 | 69.26 | humidity | 60.0 | 4320 | < th | dose independent | rect. | 12 | 1 |
| 135 | 69.26 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 13 | 6 |
| 136 | 69.26 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 13 | 6 |
| 138 | 69.28 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 4 | 14 |
| 141 | 69.29 | temperature | 30.0 | 720 | < th | dose independent | rect. | 12 | 23 |
| 142 | 69.30 | temperature | 30.0 | 720 | > th | dose independent | no | NA | NA |
| 247 | 69.35 | temperature | 30.0 | 720 | < th | dose independent | no | NA | NA |
| 250 | 69.37 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 13 | 6 |
| 270 | 69.41 | temperature | 30.0 | 720 | < th | dose independent | rect. | 16 | 23 |
| 276 | 69.44 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 19 | 2 |
| 279 | 69.44 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 13 | 8 |
| 281 | 69.45 | humidity | 60.0 | 4320 | > th | dose independent | rect. | 12 | 1 |
| 286 | 69.46 | humidity | 70.0 | 4320 | > th | dose dependent | rect. | 18 | 1 |
| 291 | 69.48 | temperature | 30.0 | 720 | > th | dose independent | rect. | 15 | 23 |
| 300 | 69.52 | humidity | 80.0 | 4320 | > th | dose independent | rect. | 18 | 2 |
| 301 | 69.52 | temperature | 30.0 | 720 | < th | dose independent | rect. | 14 | 23 |
| 305 | 69.54 | humidity | 50.0 | 14400 | > th | dose independent | rect. | 16 | 19 |
| 311 | 69.56 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 19 | 2 |
| 312 | 69.56 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 6 | 12 |
| 316 | 69.56 | temperature | 30.0 | 720 | < th | dose independent | rect. | 3 | 23 |
| 318 | 69.56 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 6 | 12 |
| 331 | 69.61 | temperature | 30.0 | 720 | > th | dose independent | rect. | 12 | 23 |
| 336 | 69.63 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 19 | 2 |
| 337 | 69.63 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 19 | 2 |
| 347 | 69.66 | precipitation | 0.1 | 14400 | > th | dose dependent | sin | 16 | NA |
| 348 | 69.66 | precipitation | 0.1 | 4320 | > th | dose dependent | sin | 0 | NA |
| 361 | 69.69 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 21 | 1 |
| 381 | 69.71 | temperature | 30.0 | 720 | > th | dose dependent | rect. | 8 | 7 |
| 404 | 69.73 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 17 | 1 |
| 407 | 69.73 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 17 | 1 |
| 430 | 69.74 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 13 | 5 |
| 505 | 69.88 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 1 | 17 |
| 506 | 69.88 | temperature | 30.0 | 720 | > th | dose dependent | sin | 5 | NA |
| 509 | 69.88 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 1 | 17 |
| 512 | 69.89 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 1 | 17 |
| 518 | 69.91 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 17 | 1 |
| 548 | 69.96 | temperature | 30.0 | 720 | < th | dose independent | rect. | 11 | 9 |
| 577 | 70.01 | temperature | 30.0 | 4320 | < th | dose independent | rect. | 14 | 1 |
| 614 | 70.06 | humidity | 50.0 | 14400 | > th | dose independent | rect. | 17 | 17 |
| 646 | 70.11 | temperature | 30.0 | 720 | < th | dose independent | rect. | 7 | 10 |
| 673 | 70.15 | temperature | 30.0 | 720 | < th | dose independent | rect. | 12 | 6 |
| 704 | 70.17 | temperature | 30.0 | 720 | < th | dose independent | rect. | 19 | 23 |
| 709 | 70.19 | temperature | 30.0 | 720 | < th | dose independent | rect. | 9 | 8 |
| 721 | 70.21 | temperature | 30.0 | 4320 | > th | dose independent | rect. | 14 | 1 |
| 743 | 70.23 | temperature | 30.0 | 720 | < th | dose independent | rect. | 9 | 12 |
| 772 | 70.26 | temperature | 30.0 | 720 | < th | dose independent | rect. | 2 | 15 |
| 781 | 70.27 | temperature | 25.0 | 4320 | > th | dose independent | rect. | 1 | 6 |
| 792 | 70.28 | wind | 1.0 | 14400 | < th | dose dependent | rect. | 2 | 1 |
| 804 | 70.31 | temperature | 30.0 | 720 | < th | dose independent | rect. | 24 | 17 |
| 848 | 70.35 | temperature | 30.0 | 720 | < th | dose independent | rect. | 1 | 23 |
| 860 | 70.37 | humidity | 50.0 | 14400 | < th | dose independent | sin | 11 | NA |
| 884 | 70.40 | temperature | 30.0 | 4320 | > th | dose independent | rect. | 11 | 1 |
| 901 | 70.40 | temperature | 30.0 | 720 | < th | dose independent | rect. | 22 | 19 |
| 931 | 70.44 | temperature | 25.0 | 4320 | > th | dose independent | rect. | 1 | 3 |
| 933 | 70.44 | wind | 9.0 | 43200 | > th | dose dependent | rect. | 20 | 1 |
| 959 | 70.47 | temperature | 25.0 | 4320 | > th | dose independent | rect. | 2 | 1 |
| 996 | 70.51 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 2 | 12 |