Os02g0159400
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Hypothetical protein.
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Os02g0159400 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 201.59 | 0.667 | 5.11 | -0.775 | 0.637 | 1.04 | 0.0401 | -1.24 | 1.17 | 8.31 | 20.9 | 3716 | -- | -- |
| 203.86 | 0.665 | 5.06 | -0.555 | 0.644 | 1.28 | 0.115 | -- | 1.24 | 8.29 | 20.43 | 3631 | -- | -- |
| 201.55 | 0.661 | 5.11 | -0.775 | 0.636 | 1.03 | -- | -1.24 | 1.17 | 8.32 | 21 | 3717 | -- | -- |
| 202.34 | 0.663 | 5.06 | -0.598 | 0.663 | 1.46 | -- | -- | 1.25 | 8.39 | 19.7 | 3668 | -- | -- |
| 223.11 | 0.696 | 5.13 | -0.764 | -- | 0.979 | -- | -1.29 | 1.16 | -- | 21.7 | 4007 | -- | -- |
| 235.92 | 0.72 | 4.98 | 0.201 | 0.61 | -- | 0.052 | -- | 1.6 | 7.99 | -- | -- | -- | -- |
| 235.93 | 0.719 | 4.98 | 0.202 | 0.61 | -- | -- | -- | 1.6 | 7.99 | -- | -- | -- | -- |
| 222.25 | 0.694 | 5.06 | -0.499 | -- | 1.59 | -- | -- | 1.33 | -- | 18.4 | 2681 | -- | -- |
| 208.39 | 0.672 | 5.04 | -- | 0.624 | 1.25 | -- | -- | 1.4 | 8.11 | 18.6 | 3559 | -- | -- |
| 256.23 | 0.748 | 5 | 0.208 | -- | -- | -- | -- | 1.61 | -- | -- | -- | -- | -- |
| 237 | 0.72 | 4.99 | -- | 0.611 | -- | -- | -- | 1.58 | 7.97 | -- | -- | -- | -- |
| 225.14 | 0.699 | 5.03 | -- | -- | 1.73 | -- | -- | 1.44 | -- | 18.3 | 1530 | -- | -- |
| 257.38 | 0.749 | 5 | -- | -- | -- | -- | -- | 1.59 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 191.75 | humidity | 90 | 14400 | > th | dose dependent | rect. | 5 | 1 |
| 2 | 192.81 | temperature | 20 | 14400 | < th | dose independent | rect. | 21 | 1 |
| 3 | 192.86 | temperature | 20 | 14400 | > th | dose independent | rect. | 21 | 1 |
| 5 | 194.07 | atmosphere | 1015 | 43200 | < th | dose independent | rect. | 16 | 5 |
| 10 | 194.26 | atmosphere | 1015 | 43200 | > th | dose independent | rect. | 14 | 8 |
| 11 | 194.27 | atmosphere | 1015 | 43200 | > th | dose independent | rect. | 18 | 3 |
| 24 | 194.42 | wind | 9 | 43200 | < th | dose dependent | rect. | 22 | 1 |
| 45 | 194.63 | atmosphere | 1015 | 43200 | < th | dose independent | rect. | 19 | 1 |
| 49 | 194.65 | wind | 1 | 43200 | > th | dose dependent | rect. | 22 | 1 |
| 65 | 194.79 | atmosphere | 1015 | 43200 | > th | dose dependent | rect. | 23 | 1 |
| 72 | 194.84 | atmosphere | 1015 | 43200 | > th | dose dependent | rect. | 20 | 4 |
| 80 | 194.89 | atmosphere | 1015 | 43200 | > th | dose dependent | rect. | 10 | 15 |
| 93 | 194.94 | wind | 1 | 14400 | < th | dose dependent | rect. | 19 | 10 |
| 103 | 194.97 | atmosphere | 1015 | 43200 | > th | dose dependent | rect. | 12 | 2 |
| 108 | 194.99 | atmosphere | 1015 | 43200 | > th | dose independent | sin | 18 | NA |
| 109 | 194.99 | atmosphere | 1015 | 43200 | < th | dose independent | rect. | 13 | 3 |
| 112 | 195.00 | atmosphere | 1015 | 43200 | < th | dose independent | sin | 18 | NA |
| 119 | 195.02 | atmosphere | 1015 | 43200 | < th | dose independent | rect. | 14 | 1 |
| 121 | 195.02 | atmosphere | 1015 | 43200 | > th | dose independent | rect. | 12 | 3 |
| 135 | 195.04 | atmosphere | 1015 | 43200 | > th | dose dependent | sin | 15 | NA |
| 152 | 195.07 | atmosphere | 1015 | 43200 | > th | dose dependent | rect. | 11 | 4 |
| 163 | 195.09 | atmosphere | 1015 | 43200 | > th | dose dependent | sin | 19 | NA |
| 171 | 195.10 | atmosphere | 1015 | 43200 | > th | dose dependent | rect. | 17 | 11 |
| 263 | 195.28 | atmosphere | 1015 | 43200 | > th | dose dependent | rect. | 10 | 7 |
| 300 | 195.36 | wind | 3 | 43200 | < th | dose dependent | rect. | 21 | 3 |
| 372 | 195.53 | radiation | 20 | 43200 | < th | dose independent | rect. | 13 | 1 |
| 549 | 195.89 | atmosphere | 1015 | 43200 | > th | dose dependent | no | NA | NA |
| 558 | 195.90 | atmosphere | 1015 | 43200 | > th | dose dependent | rect. | 1 | 23 |
| 577 | 195.94 | atmosphere | 1015 | 43200 | > th | dose dependent | rect. | 17 | 23 |
| 616 | 196.01 | atmosphere | 1015 | 43200 | > th | dose dependent | rect. | 22 | 23 |
| 670 | 196.09 | atmosphere | 1015 | 43200 | < th | dose independent | rect. | 3 | 21 |
| 774 | 196.26 | atmosphere | 1015 | 43200 | < th | dose independent | no | NA | NA |
| 797 | 196.30 | atmosphere | 1015 | 43200 | < th | dose independent | rect. | 22 | 3 |
| 809 | 196.32 | atmosphere | 1015 | 43200 | < th | dose independent | rect. | 22 | 1 |
| 813 | 196.32 | atmosphere | 1015 | 43200 | < th | dose independent | rect. | 22 | 23 |
| 839 | 196.35 | atmosphere | 1015 | 43200 | < th | dose independent | rect. | 16 | 23 |
| 866 | 196.40 | atmosphere | 1015 | 43200 | > th | dose independent | no | NA | NA |
| 867 | 196.40 | atmosphere | 1015 | 43200 | > th | dose independent | rect. | 22 | 2 |
| 935 | 196.50 | atmosphere | 1015 | 43200 | > th | dose independent | rect. | 15 | 23 |
| 967 | 196.55 | radiation | 40 | 43200 | < th | dose dependent | rect. | 13 | 1 |
| 981 | 196.58 | wind | 1 | 43200 | > th | dose independent | rect. | 23 | 3 |