Os02g0154600
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os02g0154600 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = atmosphere,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 106.5 | 0.485 | 4.46 | -1.38 | 0.394 | -0.577 | -0.683 | 0.233 | -0.0976 | 5.59 | 1010 | 3552 | -- | -- |
| 106.62 | 0.481 | 4.45 | -1.34 | 0.393 | -0.57 | -0.71 | -- | -0.0881 | 5.57 | 1010 | 3629 | -- | -- |
| 107.59 | 0.483 | 4.46 | -1.4 | 0.395 | -0.593 | -- | 0.324 | -0.0996 | 5.79 | 1010 | 3539 | -- | -- |
| 107.78 | 0.484 | 4.45 | -1.35 | 0.392 | -0.571 | -- | -- | -0.087 | 5.94 | 1010 | 3677 | -- | -- |
| 115.5 | 0.501 | 4.46 | -1.4 | -- | -0.613 | -- | 0.288 | -0.0913 | -- | 1010 | 3568 | -- | -- |
| 114.06 | 0.501 | 4.43 | -1.23 | 0.419 | -- | -0.745 | -- | 8e-04 | 5.49 | -- | -- | -- | -- |
| 115.35 | 0.503 | 4.43 | -1.23 | 0.418 | -- | -- | -- | 0.00443 | 5.83 | -- | -- | -- | -- |
| 115.69 | 0.501 | 4.46 | -1.35 | -- | -0.608 | -- | -- | -0.0787 | -- | 1010 | 3677 | -- | -- |
| 150.65 | 0.572 | 4.41 | -- | 0.387 | -0.545 | -- | -- | 0.0995 | 6.13 | 1014 | 3566 | -- | -- |
| 124.39 | 0.521 | 4.44 | -1.21 | -- | -- | -- | -- | 0.0142 | -- | -- | -- | -- | -- |
| 155 | 0.582 | 4.4 | -- | 0.399 | -- | -- | -- | 0.141 | 5.98 | -- | -- | -- | -- |
| 158.35 | 0.586 | 4.42 | -- | -- | -0.569 | -- | -- | 0.104 | -- | 1014 | 3650 | -- | -- |
| 163.25 | 0.596 | 4.41 | -- | -- | -- | -- | -- | 0.149 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 99.68 | temperature | 30.0 | 90 | > th | dose dependent | rect. | 10 | 1 |
| 2 | 101.01 | temperature | 30.0 | 90 | > th | dose independent | rect. | 10 | 1 |
| 3 | 103.56 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 8 | 15 |
| 14 | 104.49 | temperature | 30.0 | 90 | > th | dose dependent | rect. | 9 | 3 |
| 15 | 104.53 | temperature | 30.0 | 90 | > th | dose dependent | rect. | 18 | 18 |
| 34 | 104.63 | temperature | 15.0 | 10 | > th | dose dependent | rect. | 8 | 17 |
| 37 | 104.75 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 8 | 12 |
| 39 | 104.79 | temperature | 15.0 | 270 | > th | dose dependent | rect. | 16 | 21 |
| 40 | 104.81 | precipitation | 0.1 | 1440 | < th | dose independent | rect. | 9 | 5 |
| 41 | 104.81 | precipitation | 0.1 | 1440 | < th | dose dependent | rect. | 9 | 5 |
| 44 | 104.94 | temperature | 30.0 | 90 | > th | dose dependent | sin | 8 | NA |
| 56 | 105.08 | temperature | 15.0 | 270 | > th | dose dependent | rect. | 17 | 19 |
| 57 | 105.11 | temperature | 30.0 | 10 | > th | dose dependent | rect. | 12 | 1 |
| 68 | 105.20 | temperature | 10.0 | 720 | > th | dose dependent | sin | 22 | NA |
| 78 | 105.28 | precipitation | 0.1 | 1440 | < th | dose independent | rect. | 9 | 7 |
| 80 | 105.28 | precipitation | 0.1 | 1440 | < th | dose dependent | rect. | 9 | 7 |
| 87 | 105.35 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 3 | 17 |
| 159 | 105.54 | temperature | 30.0 | 720 | < th | dose dependent | rect. | 5 | 14 |
| 161 | 105.55 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 8 | 7 |
| 162 | 105.56 | wind | 7.0 | 43200 | > th | dose dependent | rect. | 18 | 7 |
| 173 | 105.60 | temperature | 30.0 | 720 | < th | dose dependent | rect. | 6 | 12 |
| 186 | 105.65 | wind | 7.0 | 43200 | > th | dose independent | rect. | 18 | 8 |
| 194 | 105.67 | temperature | 30.0 | 720 | < th | dose dependent | rect. | 4 | 17 |
| 197 | 105.68 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 3 | 19 |
| 203 | 105.70 | humidity | 90.0 | 1440 | > th | dose dependent | rect. | 10 | 9 |
| 209 | 105.72 | wind | 9.0 | 43200 | < th | dose independent | rect. | 17 | 8 |
| 211 | 105.73 | wind | 7.0 | 43200 | > th | dose independent | rect. | 18 | 3 |
| 215 | 105.74 | temperature | 30.0 | 720 | < th | dose dependent | sin | 0 | NA |
| 227 | 105.77 | humidity | 90.0 | 1440 | > th | dose independent | rect. | 10 | 9 |
| 228 | 105.78 | temperature | 15.0 | 1440 | > th | dose independent | rect. | 9 | 5 |
| 258 | 105.84 | wind | 9.0 | 43200 | < th | dose independent | rect. | 18 | 5 |
| 266 | 105.85 | wind | 7.0 | 43200 | < th | dose independent | rect. | 18 | 3 |
| 268 | 105.85 | wind | 5.0 | 43200 | > th | dose dependent | rect. | 19 | 1 |
| 270 | 105.85 | humidity | 70.0 | 14400 | < th | dose dependent | rect. | 19 | 12 |
| 306 | 105.93 | temperature | 30.0 | 10 | > th | dose dependent | rect. | 10 | 3 |
| 310 | 105.94 | humidity | 90.0 | 1440 | < th | dose independent | rect. | 10 | 8 |
| 325 | 105.96 | humidity | 70.0 | 14400 | < th | dose dependent | rect. | 19 | 3 |
| 341 | 105.97 | wind | 9.0 | 43200 | > th | dose dependent | rect. | 20 | 3 |
| 352 | 105.99 | wind | 7.0 | 43200 | < th | dose independent | rect. | 19 | 1 |
| 446 | 106.10 | humidity | 90.0 | 1440 | < th | dose independent | rect. | 8 | 11 |
| 480 | 106.13 | atmosphere | 1010.0 | 4320 | > th | dose dependent | rect. | 20 | 4 |
| 499 | 106.14 | wind | 7.0 | 43200 | > th | dose independent | sin | 13 | NA |
| 512 | 106.15 | precipitation | 0.1 | 1440 | > th | dose independent | rect. | 9 | 5 |
| 514 | 106.15 | atmosphere | 1010.0 | 4320 | > th | dose dependent | rect. | 22 | 1 |
| 524 | 106.16 | temperature | 30.0 | 270 | < th | dose independent | sin | 9 | NA |
| 525 | 106.16 | temperature | 20.0 | 1440 | > th | dose independent | rect. | 14 | 3 |
| 541 | 106.17 | wind | 7.0 | 43200 | < th | dose independent | sin | 13 | NA |
| 547 | 106.17 | temperature | 25.0 | 720 | < th | dose dependent | sin | 22 | NA |
| 631 | 106.25 | temperature | 15.0 | 1440 | > th | dose independent | rect. | 14 | 14 |
| 632 | 106.25 | temperature | 15.0 | 270 | > th | dose independent | rect. | 14 | 23 |
| 686 | 106.30 | temperature | 15.0 | 270 | > th | dose independent | rect. | 16 | 23 |
| 696 | 106.31 | precipitation | 0.1 | 1440 | > th | dose independent | rect. | 9 | 7 |
| 701 | 106.31 | wind | 7.0 | 43200 | > th | dose dependent | sin | 13 | NA |
| 718 | 106.33 | temperature | 15.0 | 1440 | > th | dose independent | rect. | 4 | 10 |
| 742 | 106.35 | atmosphere | 1010.0 | 4320 | > th | dose independent | rect. | 11 | 1 |
| 766 | 106.37 | humidity | 90.0 | 30 | < th | dose independent | rect. | 8 | 20 |
| 772 | 106.38 | wind | 9.0 | 43200 | < th | dose independent | rect. | 22 | 1 |
| 796 | 106.39 | temperature | 15.0 | 270 | > th | dose independent | rect. | 5 | 23 |
| 810 | 106.40 | temperature | 15.0 | 270 | > th | dose dependent | rect. | 17 | 7 |
| 812 | 106.40 | temperature | 20.0 | 270 | < th | dose dependent | rect. | 11 | 11 |
| 819 | 106.41 | humidity | 90.0 | 30 | < th | dose independent | rect. | 18 | 21 |
| 834 | 106.42 | atmosphere | 1010.0 | 4320 | < th | dose independent | rect. | 11 | 1 |
| 854 | 106.44 | wind | 9.0 | 43200 | > th | dose independent | rect. | 22 | 1 |
| 890 | 106.47 | humidity | 90.0 | 1440 | < th | dose independent | rect. | 10 | 4 |
| 942 | 106.50 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 21 | 1 |
| 951 | 106.50 | temperature | 20.0 | 1440 | < th | dose dependent | rect. | 9 | 17 |
| 953 | 106.50 | temperature | 30.0 | 90 | < th | dose dependent | rect. | 11 | 22 |
| 958 | 106.51 | temperature | 15.0 | 270 | > th | dose independent | rect. | 9 | 16 |
| 991 | 106.54 | temperature | 30.0 | 270 | > th | dose independent | sin | 9 | NA |
| 995 | 106.54 | temperature | 25.0 | 720 | < th | dose dependent | rect. | 9 | 10 |