BLASTP 2.2.23 [Feb-03-2010]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Os02g0154600 Os02g0154600|AK102276
         (369 letters)

Database: tair10 
           27,416 sequences; 11,106,569 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G76340.1  | chr1:28635188-28636306 REVERSE LENGTH=373          451   e-127
AT5G19980.1  | chr5:6749907-6750932 REVERSE LENGTH=342            276   1e-74
AT2G13650.1  | chr2:5687584-5690303 REVERSE LENGTH=334             54   1e-07

>AT1G76340.1 | chr1:28635188-28636306 REVERSE LENGTH=373
          Length = 372

 Score =  451 bits (1160), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 232/339 (68%), Positives = 270/339 (79%), Gaps = 2/339 (0%)

Query: 31  NILLQQTSVYGVAAGYCLSASLLSIINKWAVMKFPYPGALTALQYFTSVVGVLLCGQLKL 90
           ++ L+Q SVYGVAAGYCLSASLLSIINKWA+MKFPYPGALTA+QYFTS  GVLLC Q+KL
Sbjct: 27  SVFLRQASVYGVAAGYCLSASLLSIINKWAIMKFPYPGALTAMQYFTSAAGVLLCAQMKL 86

Query: 91  IEHDGLNLRTMWKFLPAAVMFYISIFTNSELLLHANVDTFIVFRSAVPIFVAIGETFYLH 150
           IEHD LNL TMW+FLPAA++FY+S+FTNSELLLHANVDTFIVFRSAVPIFVAIGET +LH
Sbjct: 87  IEHDSLNLLTMWRFLPAAMIFYLSLFTNSELLLHANVDTFIVFRSAVPIFVAIGETLFLH 146

Query: 151 QPWPSLKTWLSLSTILGGSVIYVFTDNQFTVTAYTWAVAYLASMSIDFVYIKHVVMTIGL 210
           QPWPS+KTW SL+TI GGS++YVFTD QFT+ AY+WA+AYL SM+IDFVYIKHVVMTIGL
Sbjct: 147 QPWPSVKTWGSLATIFGGSLLYVFTDYQFTIAAYSWALAYLVSMTIDFVYIKHVVMTIGL 206

Query: 211 NTWGLVLYNNLEAFMLFPLEMLLTGELNQMKGDNAKVTNWLSSDVILPVAXXXXXXXXXX 270
           NTWGLVLYNNLEA +LFPLE+L+ GEL ++K +    T+W S  V+LPV           
Sbjct: 207 NTWGLVLYNNLEALLLFPLELLIMGELKKIKHEITDETDWYSLQVVLPVGLSCLFGLAIS 266

Query: 271 XXXXXXRRAISATGFTVLGIVNKLLTVVINLLIWDKHASFVGTIGLLICMSGSVLYQQST 330
                 RRAISATGFTVLGIVNKLLTVVINL++WDKH++FVGT+GLL+CM G V+YQQST
Sbjct: 267 FFGFSCRRAISATGFTVLGIVNKLLTVVINLMVWDKHSTFVGTLGLLVCMFGGVMYQQST 326

Query: 331 -TXXXXXXXXXXXXXXXXXXXLLEMQQGHESSSTQ-KQT 367
                                LLEMQ+  ES+S   K+T
Sbjct: 327 IKKPNATQEAKPQEQDEEQEKLLEMQENKESNSVDIKET 365



>AT5G19980.1 | chr5:6749907-6750932 REVERSE LENGTH=342
          Length = 341

 Score =  276 bits (706), Expect = 1e-74,   Method: Compositional matrix adjust.
 Identities = 151/296 (51%), Positives = 189/296 (63%), Gaps = 1/296 (0%)

Query: 35  QQTSVYGVAAGYCLSASLLSIINKWAVMKFPYPGALTALQYFTSVVGVLLCGQLKLIEHD 94
           +Q +   +  GY L +SLL++INK A+  F YPG LTALQY T  V V L G+  LI HD
Sbjct: 10  KQLTTSSLVIGYALCSSLLAVINKLAITYFNYPGLLTALQYLTCTVAVYLLGKSGLINHD 69

Query: 95  GLNLRTMWKFLPAAVMFYISIFTNSELLLHANVDTFIVFRSAVPIFVAIGETFYLHQPWP 154
                T  KFLPAA++FY++IFTN+ LL HANVDTFIVFRS  P+ VAI +T +  QP P
Sbjct: 70  PFTWDTAKKFLPAAIVFYLAIFTNTNLLRHANVDTFIVFRSLTPLLVAIADTVFRSQPLP 129

Query: 155 SLKTWLSLSTILGGSVIYVFTDNQFTVTAYTWAVAYLASMSIDFVYIKHVVMTIGLNTWG 214
           S  T+LSL  IL G+V YV TD+ FT+TAY+WA+AYL +++ + VYIKH+V  I LN WG
Sbjct: 130 SRLTFLSLVVILAGAVGYVATDSSFTLTAYSWALAYLVTITTEMVYIKHMVSNIKLNIWG 189

Query: 215 LVLYNNLEAFMLFPLEMLLTGELNQM-KGDNAKVTNWLSSDVILPVAXXXXXXXXXXXXX 273
           LVLYNNL + M+ P+   LTGE  ++    +    N         VA             
Sbjct: 190 LVLYNNLLSLMIAPVFWFLTGEFTEVFAALSENRGNLFEPYAFSSVAASCVFGFLISYFG 249

Query: 274 XXXRRAISATGFTVLGIVNKLLTVVINLLIWDKHASFVGTIGLLICMSGSVLYQQS 329
              R AISAT FTV G+VNK LTVVIN+LIWDKHA+ VG + LL  + G V YQQS
Sbjct: 250 FAARNAISATAFTVTGVVNKFLTVVINVLIWDKHATPVGLVCLLFTICGGVGYQQS 305



>AT2G13650.1 | chr2:5687584-5690303 REVERSE LENGTH=334
          Length = 333

 Score = 53.9 bits (128), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 54/220 (24%), Positives = 96/220 (43%), Gaps = 13/220 (5%)

Query: 10  EAVSADDSSAVQKTGAWSNTLNILLQQTSVYGVAAGYCLSASLLSIINKWAVMKFPYPGA 69
           + V  +D   V K+G        +  +  + G+A  YC+S+  + ++NK+ +  + +   
Sbjct: 7   DGVDLEDGKTV-KSGGDKPIPRKIHNRALLSGLA--YCISSCSMILVNKFVLSSYNFNAG 63

Query: 70  LTALQY--FTSVVGVLLCGQLKLIEHDGLNLRTMWKFLPAAVMFYISIFTNSELLLHANV 127
           +  + Y  F SV+ V+    + LI  + L LR M  + P  V+F   + T+   L + NV
Sbjct: 64  IFLMLYQNFVSVIIVVGLSLMGLITTEPLTLRLMKVWFPVNVIFVGMLITSMFSLKYINV 123

Query: 128 DTFIVFRSAVPIFVAIGETFYLHQPWPSLKTWLSLSTILGGSVIYVFTDNQFTVTAYTWA 187
               V ++   +  A+GE  YL       + W +L  ++  +V    TD  F    Y W 
Sbjct: 124 AMVTVLKNVTNVITAVGE-MYLFNKQHDNRVWAALFLMIISAVSGGITDLSFNAVGYAWQ 182

Query: 188 VA-------YLASMSIDFVYIKHVVMTIGLNTWGLVLYNN 220
           +A       Y  ++       K V  +  LN + +VL NN
Sbjct: 183 IANCFLTASYSLTLRKTMDTAKQVTQSGNLNEFSMVLLNN 222



  Database: tair10
    Posted date:  Dec 8, 2010 11:30 AM
  Number of letters in database: 11,106,569
  Number of sequences in database:  27,416
  
Lambda     K      H
   0.322    0.134    0.399 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 6,552,916
Number of extensions: 232068
Number of successful extensions: 551
Number of sequences better than 1.0e-05: 6
Number of HSP's gapped: 553
Number of HSP's successfully gapped: 6
Length of query: 369
Length of database: 11,106,569
Length adjustment: 100
Effective length of query: 269
Effective length of database: 8,364,969
Effective search space: 2250176661
Effective search space used: 2250176661
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 112 (47.8 bits)