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Os02g0142300

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Similar to Nuclear protein-like.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 11.2 (0.0134) R2 : 0.538
β1 : 1.11 (0.049) R2dD : 0.537 R2D : 0.435
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.248 (0.0286) R2dN8 : 0.102 R2N8 : 0.000803
σ : 0.251
deviance : 28.85
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = < th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
22.14 0.221 11.2 1.29 0.269 0.514 -0.412 -0.3 0.357 13.3 24.42 26 -- --
22.24 0.22 11.2 1.25 0.27 0.55 -0.317 -- 0.343 13.4 24.06 25 -- --
22.63 0.222 11.2 1.24 0.275 0.547 -- 0.0236 0.345 13.7 24.32 30 -- --
22.63 0.222 11.2 1.24 0.275 0.542 -- -- 0.346 13.7 24.35 30 -- --
26.77 0.241 11.2 1.17 -- 0.579 -- 0.316 0.288 -- 21.02 40 -- --
26.48 0.241 11.2 1.12 0.179 -- -0.312 -- 0.253 13.3 -- -- -- --
26.83 0.243 11.2 1.11 0.183 -- -- -- 0.252 14 -- -- -- --
26.62 0.24 11.2 1.19 -- 0.389 -- -- 0.306 -- 23.69 39 -- --
41.85 0.301 11.4 -- 0.147 -0.7 -- -- -0.0751 11.7 27.45 47520 -- --
28.85 0.251 11.2 1.11 -- -- -- -- 0.248 -- -- -- -- --
59.53 0.361 11.2 -- 0.163 -- -- -- 0.128 13.8 -- -- -- --
37.28 0.284 11.3 -- -- -0.785 -- -- -0.11 -- 39.21 47520 -- --
61.13 0.365 11.2 -- -- -- -- -- 0.125 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 22.03 temperature 25.0 90 < th dose dependent rect. 11 22
2 22.07 temperature 25.0 10 < th dose dependent rect. 4 22
7 22.11 humidity 90.0 14400 > th dose dependent rect. 20 9
8 22.11 temperature 25.0 10 < th dose dependent rect. 12 21
28 22.18 temperature 25.0 90 < th dose dependent rect. 15 20
39 22.21 temperature 25.0 10 < th dose dependent rect. 23 23
45 22.23 temperature 25.0 30 < th dose dependent no NA NA
53 22.23 temperature 25.0 30 < th dose dependent rect. 15 23
54 22.23 temperature 25.0 30 < th dose dependent rect. 17 23
57 22.24 temperature 25.0 30 < th dose dependent rect. 9 23
60 22.24 temperature 25.0 30 < th dose dependent rect. 19 23
61 22.24 temperature 25.0 30 < th dose dependent rect. 21 23
62 22.25 humidity 90.0 14400 > th dose dependent rect. 24 3
68 22.25 temperature 25.0 30 < th dose dependent rect. 7 23
96 22.29 temperature 25.0 30 < th dose dependent rect. 1 23
98 22.30 temperature 25.0 90 < th dose dependent rect. 17 18
189 22.43 radiation 1.0 4320 > th dose independent rect. 17 2
216 22.47 wind 1.0 43200 > th dose independent rect. 7 1
218 22.47 temperature 15.0 270 > th dose dependent rect. 17 11
228 22.49 wind 1.0 43200 < th dose independent rect. 7 1
240 22.51 radiation 1.0 4320 < th dose independent rect. 17 2
243 22.51 radiation 1.0 4320 < th dose independent rect. 17 8
245 22.51 radiation 1.0 4320 < th dose dependent rect. 17 2
249 22.51 radiation 1.0 4320 < th dose dependent rect. 17 8
290 22.57 humidity 90.0 14400 > th dose dependent sin 10 NA
316 22.60 precipitation 0.1 14400 > th dose independent rect. 5 2
318 22.60 temperature 10.0 720 > th dose dependent rect. 16 6
342 22.63 precipitation 0.1 14400 < th dose independent rect. 5 2
345 22.63 precipitation 0.1 14400 > th dose dependent rect. 5 2
346 22.63 precipitation 0.1 14400 < th dose dependent rect. 5 2
375 22.66 atmosphere 1005.0 43200 > th dose independent rect. 10 1
378 22.66 temperature 25.0 30 < th dose dependent sin 10 NA
382 22.66 temperature 30.0 720 < th dose dependent rect. 18 6
390 22.66 radiation 1.0 1440 < th dose dependent rect. 8 21
394 22.67 atmosphere 1005.0 43200 < th dose independent rect. 9 2
398 22.67 radiation 1.0 1440 < th dose dependent rect. 8 11
408 22.67 radiation 1.0 1440 < th dose dependent rect. 8 17
445 22.69 temperature 30.0 720 < th dose dependent rect. 15 9
459 22.70 wind 1.0 43200 < th dose independent rect. 2 6
474 22.71 wind 1.0 43200 < th dose independent rect. 5 3
503 22.73 radiation 1.0 4320 < th dose dependent rect. 15 16
518 22.74 radiation 1.0 4320 < th dose dependent sin 13 NA
569 22.77 atmosphere 1005.0 43200 < th dose independent rect. 12 1
590 22.78 wind 1.0 43200 > th dose independent rect. 5 3
638 22.80 atmosphere 995.0 43200 < th dose dependent rect. 15 9
652 22.80 temperature 15.0 720 > th dose dependent rect. 9 19
657 22.81 atmosphere 1005.0 43200 < th dose independent rect. 19 1
664 22.81 atmosphere 995.0 43200 > th dose independent rect. 15 11
665 22.81 atmosphere 995.0 43200 < th dose independent rect. 15 11
672 22.81 temperature 25.0 720 < th dose dependent rect. 11 13
678 22.81 temperature 15.0 720 > th dose dependent rect. 9 17
690 22.82 atmosphere 995.0 43200 < th dose independent rect. 17 6
695 22.82 atmosphere 995.0 43200 < th dose independent rect. 16 8
720 22.83 atmosphere 995.0 43200 > th dose independent rect. 17 6
722 22.83 atmosphere 995.0 43200 > th dose independent rect. 16 8
726 22.83 atmosphere 1005.0 43200 < th dose independent rect. 8 19
730 22.83 radiation 1.0 1440 < th dose dependent sin 22 NA
732 22.83 humidity 80.0 1440 > th dose dependent rect. 11 2
753 22.83 radiation 1.0 1440 < th dose dependent rect. 18 22
756 22.84 atmosphere 995.0 43200 < th dose independent rect. 18 4
765 22.84 atmosphere 1005.0 43200 < th dose independent rect. 7 13
771 22.84 wind 9.0 43200 > th dose dependent rect. 5 1
781 22.85 atmosphere 1005.0 43200 > th dose independent rect. 19 1
782 22.85 atmosphere 1005.0 43200 < th dose independent rect. 1 2
817 22.85 atmosphere 995.0 43200 < th dose dependent rect. 16 7
824 22.86 atmosphere 1005.0 43200 < th dose independent sin 23 NA
827 22.86 atmosphere 995.0 43200 > th dose independent rect. 18 4
891 22.87 radiation 1.0 1440 < th dose independent rect. 8 17
900 22.87 temperature 15.0 720 > th dose dependent sin 15 NA
922 22.88 radiation 1.0 1440 < th dose independent rect. 8 11
934 22.88 atmosphere 1005.0 43200 > th dose independent rect. 9 18
941 22.88 atmosphere 1000.0 43200 < th dose dependent rect. 3 3
963 22.89 atmosphere 1005.0 43200 < th dose independent rect. 16 11
966 22.89 atmosphere 1005.0 43200 > th dose independent rect. 7 13
977 22.89 atmosphere 1005.0 43200 < th dose independent rect. 1 19
1000 22.89 atmosphere 1000.0 43200 < th dose dependent rect. 3 1