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Os02g0141500

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Conserved hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 9.06 (0.0161) R2 : 0.442
β1 : -- (--) R2dD : -- R2D : --
β2 : 0.746 (0.0398) R2dC : 0.433 R2C : 0.428
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.102 (0.0339) R2dN8 : 0.0143 R2N8 : 0.00909
σ : 0.304
deviance : 42.14
__
_____
C
peak time of C : 9.34
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = radiation, response mode = < th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
26.47 0.242 9.06 0.63 0.506 -0.412 -0.308 -0.623 0.136 6.84 7.351 49 -- --
28.36 0.248 9.06 0.631 0.508 -0.496 -0.226 -- 0.126 5.9 5.349 62 -- --
26.63 0.24 9.06 0.618 0.517 -0.451 -- -0.552 0.137 6.46 5.878 61 -- --
28.42 0.248 9.06 0.622 0.508 -0.458 -- -- 0.136 6.4 5.481 62 -- --
37.52 0.287 9.07 0.626 -- -0.501 -- -0.456 0.159 -- 5.878 61 -- --
31.29 0.262 9.04 0.611 0.746 -- 0.394 -- 0.171 9.5 -- -- -- --
31.84 0.264 9.04 0.625 0.746 -- -- -- 0.171 9.4 -- -- -- --
38.78 0.291 9.06 0.633 -- -0.505 -- -- 0.163 -- 6.704 31 -- --
38.45 0.289 9.07 -- 0.544 -0.509 -- -- 0.0685 5.84 2.934 78 -- --
64.44 0.375 9.06 0.621 -- -- -- -- 0.174 -- -- -- -- --
42.14 0.304 9.06 -- 0.746 -- -- -- 0.102 9.34 -- -- -- --
49.25 0.328 9.08 -- -- -0.497 -- -- 0.0875 -- 5.638 23 -- --
74.6 0.403 9.08 -- -- -- -- -- 0.105 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 24.30 temperature 25.0 30 > th dose independent rect. 4 7
2 24.40 temperature 25.0 30 > th dose independent rect. 1 10
10 24.66 radiation 10.0 90 < th dose dependent sin 9 NA
12 24.69 temperature 10.0 10 > th dose dependent rect. 6 20
24 24.88 radiation 1.0 90 < th dose independent sin 7 NA
27 24.92 temperature 10.0 90 > th dose dependent rect. 5 6
35 25.08 radiation 1.0 90 > th dose independent sin 5 NA
37 25.11 wind 5.0 30 < th dose dependent rect. 6 5
43 25.17 temperature 15.0 270 > th dose dependent rect. 4 4
44 25.22 wind 3.0 30 < th dose independent rect. 6 5
52 25.28 temperature 15.0 10 > th dose dependent rect. 6 5
62 25.34 radiation 1.0 90 > th dose independent rect. 4 7
83 25.45 temperature 25.0 10 < th dose independent rect. 24 6
100 25.55 radiation 1.0 90 < th dose independent rect. 1 13
105 25.57 radiation 1.0 90 < th dose independent rect. 1 6
109 25.58 radiation 1.0 90 < th dose independent rect. 1 10
112 25.59 radiation 1.0 90 < th dose independent rect. 1 8
122 25.65 wind 5.0 30 < th dose dependent rect. 6 12
129 25.69 humidity 90.0 10 < th dose independent rect. 6 5
139 25.71 temperature 15.0 270 > th dose dependent rect. 6 1
144 25.75 humidity 50.0 30 > th dose independent rect. 11 19
152 25.78 temperature 25.0 10 < th dose independent rect. 1 13
157 25.80 humidity 60.0 10 > th dose independent rect. 6 5
162 25.80 radiation 1.0 90 < th dose dependent rect. 1 13
170 25.83 radiation 1.0 90 < th dose dependent rect. 1 9
176 25.84 radiation 1.0 90 < th dose dependent rect. 1 7
181 25.86 radiation 40.0 10 < th dose independent rect. 6 5
183 25.86 wind 7.0 10 < th dose dependent rect. 18 12
209 25.91 temperature 25.0 10 < th dose independent sin 6 NA
211 25.92 precipitation 0.1 30 < th dose independent rect. 11 19
213 25.92 precipitation 0.1 30 < th dose dependent rect. 11 19
214 25.93 precipitation 0.1 90 < th dose independent rect. 5 6
217 25.93 precipitation 0.1 90 < th dose dependent rect. 5 6
219 25.94 humidity 60.0 270 > th dose independent rect. 19 13
230 25.96 wind 1.0 270 > th dose independent rect. 8 11
231 25.96 temperature 10.0 270 > th dose independent rect. 8 11
232 25.96 atmosphere 1015.0 270 < th dose independent rect. 8 11
233 25.96 temperature 10.0 270 > th dose independent rect. 19 13
234 25.96 temperature 30.0 270 < th dose independent rect. 19 13
236 25.96 atmosphere 995.0 270 > th dose independent rect. 19 13
238 25.96 temperature 15.0 30 > th dose independent rect. 11 19
239 25.96 temperature 30.0 30 < th dose independent rect. 11 19
242 25.97 temperature 10.0 1440 > th dose independent rect. 7 5
245 25.97 atmosphere 995.0 1440 > th dose independent rect. 7 5
247 25.97 temperature 10.0 90 > th dose independent rect. 5 6
249 25.97 atmosphere 995.0 90 > th dose independent rect. 5 6
250 25.97 atmosphere 1015.0 90 < th dose independent rect. 5 6
253 25.97 temperature 10.0 1440 > th dose independent rect. 12 19
262 25.98 wind 3.0 30 < th dose independent rect. 6 12
274 25.99 wind 9.0 270 < th dose independent rect. 19 13
284 26.01 radiation 40.0 270 < th dose independent rect. 19 13
295 26.03 humidity 90.0 10 < th dose independent rect. 4 7
306 26.06 wind 9.0 30 < th dose independent rect. 11 19
330 26.13 radiation 1.0 270 > th dose independent rect. 4 4
340 26.13 radiation 10.0 10 < th dose dependent rect. 2 4
351 26.15 temperature 30.0 30 < th dose independent rect. 6 5
353 26.15 wind 5.0 30 < th dose dependent rect. 6 8
360 26.17 temperature 25.0 10 > th dose independent sin 6 NA
404 26.21 atmosphere 995.0 10 > th dose dependent rect. 1 5
405 26.21 wind 7.0 10 < th dose dependent rect. 24 6
407 26.22 wind 1.0 10 > th dose independent rect. 6 5
419 26.24 wind 5.0 270 < th dose independent rect. 4 4
421 26.24 atmosphere 995.0 30 > th dose independent rect. 11 19
422 26.24 atmosphere 995.0 30 > th dose dependent rect. 6 5
431 26.26 wind 9.0 270 < th dose independent rect. 8 11
443 26.28 radiation 30.0 10 < th dose independent rect. 6 20
453 26.29 wind 9.0 270 < th dose independent rect. 3 22
457 26.30 precipitation 0.1 270 < th dose independent rect. 1 2
460 26.30 precipitation 0.1 270 < th dose dependent rect. 1 2
464 26.31 wind 5.0 270 < th dose independent rect. 1 2
467 26.31 temperature 10.0 270 > th dose independent rect. 1 2
469 26.31 temperature 30.0 270 < th dose independent rect. 1 2
470 26.31 humidity 50.0 270 > th dose independent rect. 1 2
473 26.31 atmosphere 995.0 270 > th dose independent rect. 1 2
474 26.31 atmosphere 1010.0 270 < th dose independent rect. 1 2
476 26.31 radiation 1.0 270 < th dose independent rect. 1 2
484 26.31 temperature 10.0 270 > th dose independent rect. 3 22
485 26.31 radiation 1.0 270 < th dose dependent rect. 1 2
493 26.32 wind 3.0 270 < th dose independent rect. 6 1
501 26.33 atmosphere 1015.0 10 < th dose independent rect. 6 19
505 26.34 precipitation 0.1 270 < th dose independent rect. 8 11
507 26.34 wind 9.0 270 < th dose dependent rect. 1 2
511 26.34 precipitation 0.1 270 < th dose dependent rect. 8 11
523 26.36 precipitation 0.1 270 < th dose independent rect. 4 4
529 26.36 precipitation 0.1 270 < th dose dependent rect. 4 4
534 26.37 atmosphere 1015.0 30 < th dose independent rect. 11 19
536 26.37 wind 9.0 270 < th dose dependent rect. 5 3
543 26.38 wind 9.0 270 < th dose independent rect. 13 11
550 26.39 temperature 20.0 270 > th dose independent rect. 5 3
553 26.39 atmosphere 995.0 270 > th dose dependent rect. 1 2
560 26.40 humidity 70.0 270 > th dose independent rect. 4 4
586 26.42 temperature 25.0 10 > th dose independent rect. 6 3
599 26.42 radiation 10.0 30 < th dose dependent rect. 11 19
617 26.43 temperature 10.0 270 > th dose independent rect. 4 4
619 26.43 temperature 30.0 270 < th dose independent rect. 4 4
620 26.43 humidity 50.0 270 > th dose independent rect. 4 4
622 26.43 atmosphere 995.0 270 > th dose independent rect. 4 4
623 26.43 atmosphere 1015.0 270 < th dose independent rect. 4 4
628 26.43 temperature 10.0 270 > th dose independent rect. 8 20
629 26.43 precipitation 0.1 270 < th dose independent rect. 8 20
645 26.43 precipitation 0.1 270 < th dose dependent rect. 8 20
650 26.44 temperature 10.0 270 > th dose independent rect. 13 11
652 26.44 temperature 10.0 270 > th dose independent rect. 24 13
653 26.44 atmosphere 995.0 270 > th dose independent rect. 24 13
658 26.44 radiation 1.0 90 > th dose independent rect. 15 23
675 26.45 atmosphere 1015.0 270 < th dose independent rect. 24 13
677 26.45 temperature 30.0 270 < th dose dependent rect. 1 2
680 26.45 temperature 30.0 10 < th dose dependent rect. 24 6
690 26.46 radiation 40.0 270 < th dose independent rect. 4 4
692 26.46 precipitation 0.1 30 < th dose independent rect. 1 5
702 26.46 precipitation 0.1 30 < th dose dependent rect. 1 5
718 26.47 humidity 90.0 10 < th dose independent rect. 6 3
719 26.47 humidity 90.0 90 < th dose independent rect. 6 3
744 26.48 humidity 50.0 270 > th dose dependent rect. 1 2
752 26.49 wind 7.0 10 < th dose independent rect. 1 5
765 26.50 wind 9.0 10 < th dose independent rect. 6 19
769 26.51 wind 1.0 270 > th dose independent rect. 24 3
775 26.51 temperature 10.0 10 > th dose independent rect. 1 5
778 26.51 humidity 50.0 10 > th dose independent rect. 1 5
783 26.51 atmosphere 995.0 10 > th dose independent rect. 1 5
784 26.51 atmosphere 1010.0 10 < th dose independent rect. 1 5
786 26.51 radiation 20.0 10 < th dose independent rect. 1 5
791 26.51 temperature 10.0 10 > th dose independent rect. 6 19
793 26.51 temperature 20.0 10 > th dose dependent rect. 6 3
814 26.52 wind 9.0 270 < th dose independent rect. 24 13
827 26.53 wind 9.0 1440 < th dose independent rect. 2 5
828 26.53 temperature 10.0 1440 > th dose independent rect. 2 5
831 26.53 temperature 30.0 1440 < th dose independent rect. 2 5
835 26.53 humidity 50.0 1440 > th dose independent rect. 2 5
840 26.53 atmosphere 995.0 1440 > th dose independent rect. 2 5
841 26.53 radiation 40.0 1440 < th dose independent rect. 2 5
847 26.53 temperature 10.0 1440 > th dose independent rect. 7 19
872 26.54 wind 7.0 270 < th dose dependent rect. 6 1
881 26.55 atmosphere 1015.0 1440 < th dose independent rect. 2 5
910 26.56 radiation 1.0 90 < th dose independent rect. 17 14
948 26.57 humidity 50.0 10 > th dose dependent rect. 24 6
952 26.57 radiation 10.0 30 < th dose dependent rect. 16 23
954 26.58 radiation 20.0 270 < th dose independent rect. 6 1
970 26.58 precipitation 0.1 270 < th dose independent rect. 19 13
971 26.58 wind 1.0 10 > th dose independent rect. 21 14
985 26.58 precipitation 0.1 270 < th dose dependent rect. 19 13
988 26.58 temperature 10.0 10 > th dose dependent rect. 21 14
998 26.60 wind 1.0 270 > th dose independent rect. 4 4