Os02g0141000
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : AIG2-like family protein.
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Os02g0141000 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : AIG2-like family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = atmosphere,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 99.41 | 0.468 | 6.73 | -1.4 | 1 | -0.542 | -0.16 | -1.54 | -0.319 | 2.72 | 1012 | 7360 | -- | -- |
| 102.2 | 0.471 | 6.79 | -1.79 | 1 | -0.411 | -0.163 | -- | -0.438 | 2.71 | 1012 | 18434 | -- | -- |
| 99.5 | 0.465 | 6.73 | -1.39 | 1 | -0.542 | -- | -1.54 | -0.318 | 2.73 | 1012 | 7349 | -- | -- |
| 100.22 | 0.466 | 6.8 | -1.86 | 0.994 | -0.651 | -- | -- | -0.437 | 2.74 | 1013 | 23634 | -- | -- |
| 156.62 | 0.583 | 6.73 | -1.26 | -- | -0.463 | -- | -1.4 | -0.297 | -- | 1011 | 9630 | -- | -- |
| 110.62 | 0.493 | 6.76 | -1.59 | 1.01 | -- | -0.164 | -- | -0.312 | 2.72 | -- | -- | -- | -- |
| 110.71 | 0.493 | 6.76 | -1.58 | 1.01 | -- | -- | -- | -0.311 | 2.74 | -- | -- | -- | -- |
| 156.83 | 0.583 | 6.8 | -1.92 | -- | -0.736 | -- | -- | -0.483 | -- | 1013 | 23831 | -- | -- |
| 174.22 | 0.615 | 6.71 | -- | 0.992 | 0.226 | -- | -- | -0.0926 | 2.74 | 1011 | 7584 | -- | -- |
| 169.94 | 0.609 | 6.76 | -1.54 | -- | -- | -- | -- | -0.285 | -- | -- | -- | -- | -- |
| 176.62 | 0.622 | 6.72 | -- | 0.978 | -- | -- | -- | -0.135 | 2.72 | -- | -- | -- | -- |
| 207.56 | 0.671 | 6.68 | -- | -- | 0.871 | -- | -- | 0.0516 | -- | 1015 | 47520 | -- | -- |
| 232.36 | 0.712 | 6.72 | -- | -- | -- | -- | -- | -0.114 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 95.71 | radiation | 1.0 | 14400 | > th | dose independent | rect. | 16 | 1 |
| 2 | 95.76 | radiation | 1.0 | 14400 | < th | dose independent | rect. | 16 | 1 |
| 9 | 96.68 | atmosphere | 1015.0 | 270 | < th | dose dependent | rect. | 12 | 17 |
| 18 | 97.11 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 21 | 2 |
| 19 | 97.11 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 21 | 2 |
| 22 | 97.17 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 21 | 2 |
| 23 | 97.17 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 21 | 2 |
| 26 | 97.29 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 20 | 4 |
| 29 | 97.34 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 20 | 4 |
| 31 | 97.34 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 20 | 4 |
| 35 | 97.39 | atmosphere | 1010.0 | 90 | < th | dose dependent | rect. | 15 | 16 |
| 39 | 97.45 | atmosphere | 995.0 | 270 | > th | dose dependent | rect. | 16 | 10 |
| 54 | 97.74 | radiation | 1.0 | 14400 | < th | dose dependent | rect. | 16 | 1 |
| 59 | 97.85 | atmosphere | 1000.0 | 10 | > th | dose independent | rect. | 20 | 16 |
| 67 | 97.95 | atmosphere | 1005.0 | 270 | > th | dose independent | rect. | 16 | 7 |
| 82 | 98.14 | atmosphere | 1015.0 | 14400 | > th | dose dependent | rect. | 14 | 9 |
| 84 | 98.14 | atmosphere | 1010.0 | 10 | < th | dose dependent | rect. | 14 | 18 |
| 90 | 98.18 | atmosphere | 1015.0 | 14400 | > th | dose dependent | rect. | 17 | 5 |
| 95 | 98.21 | temperature | 15.0 | 4320 | > th | dose dependent | rect. | 1 | 2 |
| 97 | 98.22 | temperature | 25.0 | 4320 | > th | dose independent | rect. | 23 | 1 |
| 102 | 98.23 | temperature | 30.0 | 4320 | < th | dose dependent | rect. | 1 | 1 |
| 103 | 98.23 | temperature | 30.0 | 4320 | < th | dose dependent | rect. | 23 | 1 |
| 105 | 98.23 | temperature | 15.0 | 4320 | > th | dose dependent | rect. | 23 | 4 |
| 106 | 98.23 | temperature | 30.0 | 4320 | < th | dose dependent | rect. | 23 | 4 |
| 112 | 98.25 | temperature | 25.0 | 4320 | < th | dose independent | rect. | 23 | 2 |
| 115 | 98.25 | temperature | 15.0 | 4320 | > th | dose dependent | rect. | 23 | 1 |
| 120 | 98.27 | atmosphere | 1000.0 | 270 | > th | dose independent | rect. | 18 | 16 |
| 124 | 98.27 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 14 | 17 |
| 133 | 98.29 | humidity | 50.0 | 4320 | < th | dose independent | rect. | 11 | 4 |
| 137 | 98.30 | temperature | 25.0 | 4320 | < th | dose independent | rect. | 22 | 6 |
| 149 | 98.33 | atmosphere | 1010.0 | 30 | < th | dose dependent | sin | 14 | NA |
| 198 | 98.45 | temperature | 25.0 | 4320 | > th | dose independent | rect. | 22 | 3 |
| 199 | 98.46 | atmosphere | 1015.0 | 14400 | > th | dose independent | rect. | 15 | 6 |
| 214 | 98.49 | temperature | 25.0 | 4320 | > th | dose dependent | rect. | 23 | 1 |
| 240 | 98.52 | temperature | 25.0 | 1440 | < th | dose independent | rect. | 20 | 1 |
| 313 | 98.62 | temperature | 15.0 | 30 | > th | dose dependent | rect. | 12 | 19 |
| 355 | 98.70 | atmosphere | 1015.0 | 14400 | > th | dose dependent | rect. | 23 | 1 |
| 391 | 98.73 | temperature | 25.0 | 4320 | > th | dose dependent | rect. | 22 | 3 |
| 404 | 98.74 | temperature | 20.0 | 270 | > th | dose dependent | rect. | 12 | 19 |
| 423 | 98.77 | temperature | 20.0 | 30 | > th | dose dependent | rect. | 12 | 21 |
| 430 | 98.79 | temperature | 15.0 | 270 | > th | dose dependent | rect. | 10 | 21 |
| 444 | 98.82 | temperature | 25.0 | 4320 | > th | dose dependent | rect. | 22 | 7 |
| 475 | 98.87 | atmosphere | 1015.0 | 14400 | < th | dose independent | rect. | 17 | 3 |
| 476 | 98.87 | atmosphere | 1015.0 | 14400 | > th | dose dependent | sin | 17 | NA |
| 554 | 98.96 | atmosphere | 1015.0 | 14400 | > th | dose independent | rect. | 14 | 10 |
| 569 | 98.98 | atmosphere | 1015.0 | 14400 | < th | dose independent | rect. | 15 | 6 |
| 632 | 99.04 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 11 | 1 |
| 679 | 99.08 | atmosphere | 1015.0 | 14400 | < th | dose independent | rect. | 15 | 9 |
| 681 | 99.08 | humidity | 50.0 | 4320 | < th | dose dependent | rect. | 14 | 2 |
| 705 | 99.11 | humidity | 50.0 | 4320 | > th | dose independent | rect. | 12 | 1 |
| 731 | 99.13 | temperature | 25.0 | 4320 | < th | dose independent | rect. | 2 | 4 |
| 754 | 99.14 | atmosphere | 1015.0 | 14400 | > th | dose dependent | rect. | 12 | 7 |
| 768 | 99.15 | atmosphere | 1015.0 | 14400 | > th | dose dependent | rect. | 13 | 2 |
| 810 | 99.18 | temperature | 30.0 | 4320 | < th | dose dependent | rect. | 5 | 1 |
| 820 | 99.19 | atmosphere | 1015.0 | 14400 | > th | dose independent | rect. | 14 | 1 |
| 829 | 99.19 | humidity | 50.0 | 14400 | < th | dose dependent | rect. | 11 | 2 |
| 851 | 99.21 | humidity | 50.0 | 4320 | < th | dose independent | sin | 7 | NA |
| 894 | 99.23 | temperature | 25.0 | 4320 | < th | dose independent | rect. | 16 | 13 |
| 905 | 99.24 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 9 | 3 |
| 922 | 99.25 | atmosphere | 1015.0 | 14400 | > th | dose independent | rect. | 23 | 1 |
| 950 | 99.27 | atmosphere | 1015.0 | 14400 | < th | dose independent | rect. | 22 | 2 |
| 952 | 99.27 | humidity | 50.0 | 14400 | > th | dose independent | rect. | 11 | 4 |
| 985 | 99.28 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 22 | 14 |
| 986 | 99.28 | atmosphere | 995.0 | 30 | > th | dose dependent | sin | 14 | NA |