BLASTP 2.2.23 [Feb-03-2010]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Os02g0141000 Os02g0141000|AK121058
         (153 letters)

Database: rap3 
           52,214 sequences; 17,035,801 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Os02g0141000  AIG2-like family protein                            315   9e-87
Os06g0702700  AIG2-like family protein                            202   8e-53

>Os02g0141000 AIG2-like family protein
          Length = 153

 Score =  315 bits (807), Expect = 9e-87,   Method: Compositional matrix adjust.
 Identities = 153/153 (100%), Positives = 153/153 (100%)

Query: 1   MAAAAASHRVFVYGTLMAEEVVRVLIGRSPSSSPAVLPNHQRFSIKGRVYPAILPVDGKE 60
           MAAAAASHRVFVYGTLMAEEVVRVLIGRSPSSSPAVLPNHQRFSIKGRVYPAILPVDGKE
Sbjct: 1   MAAAAASHRVFVYGTLMAEEVVRVLIGRSPSSSPAVLPNHQRFSIKGRVYPAILPVDGKE 60

Query: 61  VSGKVFKGITDRELNVLDIFEDEEYVKRTVEISLTDTSEKLLAYAYIWGNQDDPDLYGEW 120
           VSGKVFKGITDRELNVLDIFEDEEYVKRTVEISLTDTSEKLLAYAYIWGNQDDPDLYGEW
Sbjct: 61  VSGKVFKGITDRELNVLDIFEDEEYVKRTVEISLTDTSEKLLAYAYIWGNQDDPDLYGEW 120

Query: 121 DFEEWKRVHLEDYVKMTQEFMEELEQLEPKTET 153
           DFEEWKRVHLEDYVKMTQEFMEELEQLEPKTET
Sbjct: 121 DFEEWKRVHLEDYVKMTQEFMEELEQLEPKTET 153



>Os06g0702700 AIG2-like family protein
          Length = 190

 Score =  202 bits (514), Expect = 8e-53,   Method: Compositional matrix adjust.
 Identities = 92/144 (63%), Positives = 116/144 (80%)

Query: 8   HRVFVYGTLMAEEVVRVLIGRSPSSSPAVLPNHQRFSIKGRVYPAILPVDGKEVSGKVFK 67
           H VFVYG+LM +EVVR +I R P SSPA+LPN+ RF+IKGR+YPAILPV  K+V+GKV  
Sbjct: 21  HSVFVYGSLMQDEVVRTIIKRVPPSSPALLPNYHRFNIKGRIYPAILPVQSKKVAGKVIT 80

Query: 68  GITDRELNVLDIFEDEEYVKRTVEISLTDTSEKLLAYAYIWGNQDDPDLYGEWDFEEWKR 127
           G+TD EL +LD FED EYV+  VEISLTDTSE +LA  Y+W + +DP+LYGEWDFEEWKR
Sbjct: 81  GVTDAELQILDEFEDVEYVRTRVEISLTDTSETMLADTYVWADAEDPNLYGEWDFEEWKR 140

Query: 128 VHLEDYVKMTQEFMEELEQLEPKT 151
           +H++D++ MT  FM+ LEQ E K+
Sbjct: 141 LHMKDFLAMTHGFMDGLEQPESKS 164



  Database: rap3
    Posted date:  Nov 19, 2010  6:03 PM
  Number of letters in database: 17,035,801
  Number of sequences in database:  52,214
  
Lambda     K      H
   0.316    0.134    0.390 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 5,441,420
Number of extensions: 224589
Number of successful extensions: 576
Number of sequences better than 1.0e-10: 2
Number of HSP's gapped: 576
Number of HSP's successfully gapped: 2
Length of query: 153
Length of database: 17,035,801
Length adjustment: 92
Effective length of query: 61
Effective length of database: 12,232,113
Effective search space: 746158893
Effective search space used: 746158893
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 151 (62.8 bits)