Os02g0140300
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Molybdopterin biosynthesis MoaE family protein.
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Os02g0140300 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Molybdopterin biosynthesis MoaE family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 167.4 | 0.608 | 8.71 | 0.44 | 1.31 | 0.364 | 0.389 | -2.66 | 2.41e-05 | 16.4 | 29.11 | 1291 | -- | -- |
| 170.64 | 0.608 | 8.74 | 0.00813 | 1.35 | 1.09 | 0.145 | -- | -0.246 | 16.5 | 70 | 1393 | -- | -- |
| 167.78 | 0.603 | 8.71 | 0.44 | 1.31 | 0.364 | -- | -2.64 | 0.00162 | 16.4 | 29.08 | 1279 | -- | -- |
| 168.65 | 0.605 | 8.77 | -0.121 | 1.31 | 1.48 | -- | -- | -0.237 | 16.2 | 70 | 1395 | -- | -- |
| 259.01 | 0.75 | 8.7 | 0.512 | -- | 0.509 | -- | -2.36 | -0.00925 | -- | 24.82 | 1302 | -- | -- |
| 183.32 | 0.635 | 8.75 | 0.187 | 1.33 | -- | 0.216 | -- | -0.143 | 16.3 | -- | -- | -- | -- |
| 183.45 | 0.634 | 8.75 | 0.19 | 1.33 | -- | -- | -- | -0.142 | 16.3 | -- | -- | -- | -- |
| 264.92 | 0.758 | 8.76 | -0.194 | -- | 1.44 | -- | -- | -0.273 | -- | 69.52 | 1383 | -- | -- |
| 169.1 | 0.606 | 8.76 | -- | 1.34 | 1.36 | -- | -- | -0.222 | 16.2 | 69.59 | 1393 | -- | -- |
| 278.99 | 0.78 | 8.74 | 0.136 | -- | -- | -- | -- | -0.177 | -- | -- | -- | -- | -- |
| 184.39 | 0.635 | 8.75 | -- | 1.33 | -- | -- | -- | -0.163 | 16.3 | -- | -- | -- | -- |
| 265.74 | 0.759 | 8.75 | -- | -- | 1.29 | -- | -- | -0.246 | -- | 69.67 | 1382 | -- | -- |
| 279.48 | 0.78 | 8.74 | -- | -- | -- | -- | -- | -0.193 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 157.96 | humidity | 90.0 | 4320 | > th | dose dependent | rect. | 6 | 2 |
| 6 | 160.81 | humidity | 90.0 | 4320 | > th | dose independent | rect. | 6 | 2 |
| 14 | 162.72 | atmosphere | 1005.0 | 270 | > th | dose independent | rect. | 15 | 16 |
| 15 | 162.77 | wind | 1.0 | 14400 | > th | dose independent | rect. | 1 | 1 |
| 17 | 162.98 | humidity | 90.0 | 4320 | < th | dose independent | rect. | 7 | 1 |
| 18 | 163.01 | atmosphere | 1005.0 | 30 | > th | dose independent | rect. | 17 | 15 |
| 19 | 163.30 | wind | 3.0 | 14400 | < th | dose dependent | rect. | 1 | 1 |
| 34 | 164.09 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 13 | 1 |
| 38 | 164.24 | humidity | 60.0 | 14400 | > th | dose dependent | rect. | 17 | 1 |
| 39 | 164.35 | humidity | 90.0 | 14400 | < th | dose dependent | rect. | 12 | 6 |
| 41 | 164.36 | humidity | 90.0 | 14400 | < th | dose dependent | rect. | 16 | 2 |
| 59 | 164.70 | wind | 1.0 | 14400 | > th | dose independent | rect. | 24 | 3 |
| 68 | 164.82 | humidity | 90.0 | 14400 | < th | dose dependent | rect. | 13 | 2 |
| 92 | 165.01 | wind | 1.0 | 14400 | < th | dose dependent | rect. | 6 | 1 |
| 99 | 165.09 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 13 | 1 |
| 100 | 165.09 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 13 | 1 |
| 104 | 165.10 | humidity | 90.0 | 14400 | < th | dose dependent | rect. | 8 | 11 |
| 125 | 165.22 | humidity | 90.0 | 14400 | < th | dose dependent | sin | 20 | NA |
| 129 | 165.24 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 13 | 1 |
| 161 | 165.35 | humidity | 90.0 | 14400 | < th | dose dependent | rect. | 8 | 15 |
| 189 | 165.43 | humidity | 50.0 | 14400 | > th | dose dependent | rect. | 14 | 8 |
| 225 | 165.50 | humidity | 90.0 | 14400 | < th | dose dependent | rect. | 12 | 21 |
| 306 | 165.68 | humidity | 50.0 | 14400 | > th | dose dependent | rect. | 7 | 12 |
| 324 | 165.71 | humidity | 50.0 | 14400 | > th | dose dependent | rect. | 4 | 15 |
| 379 | 165.81 | humidity | 50.0 | 14400 | > th | dose dependent | sin | 19 | NA |
| 385 | 165.81 | humidity | 50.0 | 14400 | > th | dose dependent | rect. | 7 | 17 |
| 386 | 165.81 | humidity | 50.0 | 14400 | > th | dose dependent | rect. | 13 | 20 |
| 434 | 165.88 | humidity | 50.0 | 14400 | > th | dose dependent | rect. | 4 | 19 |
| 436 | 165.89 | humidity | 90.0 | 14400 | < th | dose dependent | no | NA | NA |
| 464 | 165.92 | humidity | 70.0 | 14400 | > th | dose independent | rect. | 15 | 3 |
| 503 | 165.97 | humidity | 50.0 | 14400 | > th | dose dependent | rect. | 21 | 22 |
| 588 | 166.07 | humidity | 90.0 | 14400 | < th | dose dependent | rect. | 16 | 23 |
| 648 | 166.15 | humidity | 50.0 | 14400 | > th | dose dependent | no | NA | NA |
| 667 | 166.18 | humidity | 80.0 | 14400 | > th | dose independent | rect. | 14 | 10 |
| 681 | 166.20 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 4 | 1 |
| 765 | 166.35 | humidity | 50.0 | 14400 | > th | dose dependent | rect. | 7 | 2 |
| 774 | 166.36 | humidity | 70.0 | 14400 | > th | dose independent | rect. | 17 | 1 |
| 797 | 166.38 | humidity | 70.0 | 14400 | > th | dose independent | rect. | 13 | 20 |
| 828 | 166.41 | radiation | 30.0 | 1440 | < th | dose independent | rect. | 15 | 21 |
| 916 | 166.52 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 4 | 1 |