Os02g0137500
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to P300/CBP acetyltransferase-related protein 2.
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Os02g0137500 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to P300/CBP acetyltransferase-related protein 2.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 24.99 | 0.235 | 11.4 | 1.01 | 0.406 | -0.779 | 0.351 | 2.61 | 0.318 | 7.78 | 13.91 | 481 | -- | -- |
| 27.61 | 0.245 | 11.4 | 0.845 | 0.585 | -0.691 | -0.073 | -- | 0.313 | 7.22 | 10.8 | 10803 | -- | -- |
| 25.13 | 0.233 | 11.4 | 0.983 | 0.417 | -0.78 | -- | 2.36 | 0.311 | 8.31 | 15.59 | 361 | -- | -- |
| 27.63 | 0.245 | 11.4 | 0.842 | 0.585 | -0.686 | -- | -- | 0.312 | 7.24 | 10.49 | 10795 | -- | -- |
| 31.71 | 0.262 | 11.4 | 1.14 | -- | -1.06 | -- | 2.42 | 0.399 | -- | 17.57 | 515 | -- | -- |
| 35.28 | 0.278 | 11.4 | 0.427 | 0.588 | -- | -0.0515 | -- | 0.0943 | 7.41 | -- | -- | -- | -- |
| 35.29 | 0.278 | 11.4 | 0.426 | 0.588 | -- | -- | -- | 0.0944 | 7.41 | -- | -- | -- | -- |
| 35.69 | 0.278 | 11.4 | 0.68 | -- | -1.07 | -- | -- | 0.261 | -- | 14.7 | 533 | -- | -- |
| 37.38 | 0.286 | 11.4 | -- | 0.574 | -0.505 | -- | -- | 0.107 | 8.29 | 10.49 | 10795 | -- | -- |
| 53.71 | 0.342 | 11.4 | 0.436 | -- | -- | -- | -- | 0.104 | -- | -- | -- | -- | -- |
| 40.07 | 0.296 | 11.4 | -- | 0.592 | -- | -- | -- | 0.0469 | 7.36 | -- | -- | -- | -- |
| 45.82 | 0.315 | 11.5 | -- | -- | -0.66 | -- | -- | 0.0976 | -- | 24.65 | 542 | -- | -- |
| 58.71 | 0.358 | 11.5 | -- | -- | -- | -- | -- | 0.0556 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 22.48 | humidity | 90 | 14400 | > th | dose dependent | rect. | 19 | 7 |
| 2 | 22.48 | humidity | 90 | 14400 | > th | dose dependent | rect. | 18 | 9 |
| 6 | 22.57 | humidity | 90 | 14400 | > th | dose dependent | rect. | 16 | 12 |
| 7 | 22.58 | humidity | 90 | 14400 | > th | dose dependent | sin | 14 | NA |
| 14 | 22.64 | humidity | 90 | 14400 | > th | dose dependent | rect. | 17 | 17 |
| 82 | 22.86 | humidity | 90 | 14400 | > th | dose independent | rect. | 18 | 14 |
| 93 | 22.88 | humidity | 90 | 14400 | > th | dose independent | rect. | 18 | 10 |
| 117 | 22.93 | radiation | 1 | 14400 | > th | dose independent | rect. | 18 | 12 |
| 146 | 22.99 | humidity | 90 | 14400 | > th | dose dependent | no | NA | NA |
| 154 | 23.00 | humidity | 90 | 14400 | > th | dose dependent | rect. | 6 | 23 |
| 156 | 23.00 | humidity | 90 | 14400 | > th | dose dependent | rect. | 24 | 23 |
| 174 | 23.05 | humidity | 90 | 14400 | > th | dose independent | sin | 13 | NA |
| 188 | 23.08 | humidity | 90 | 14400 | > th | dose dependent | rect. | 3 | 23 |
| 204 | 23.12 | radiation | 1 | 14400 | < th | dose independent | rect. | 18 | 12 |
| 264 | 23.28 | humidity | 90 | 14400 | < th | dose independent | rect. | 18 | 15 |
| 306 | 23.37 | humidity | 90 | 14400 | < th | dose independent | rect. | 18 | 7 |
| 373 | 23.48 | humidity | 80 | 43200 | > th | dose independent | rect. | 4 | 3 |
| 376 | 23.49 | humidity | 90 | 14400 | > th | dose dependent | rect. | 5 | 3 |
| 414 | 23.55 | humidity | 90 | 14400 | > th | dose dependent | rect. | 4 | 6 |
| 422 | 23.57 | humidity | 90 | 14400 | < th | dose independent | sin | 12 | NA |
| 456 | 23.62 | humidity | 90 | 14400 | > th | dose independent | rect. | 1 | 9 |
| 497 | 23.69 | humidity | 90 | 14400 | > th | dose independent | no | NA | NA |
| 511 | 23.70 | humidity | 90 | 14400 | > th | dose independent | rect. | 6 | 23 |
| 538 | 23.73 | humidity | 80 | 43200 | < th | dose independent | rect. | 3 | 4 |
| 549 | 23.75 | humidity | 90 | 14400 | > th | dose independent | rect. | 23 | 23 |
| 557 | 23.76 | humidity | 80 | 43200 | > th | dose independent | rect. | 24 | 7 |
| 585 | 23.79 | humidity | 80 | 43200 | < th | dose independent | rect. | 23 | 8 |
| 597 | 23.80 | humidity | 80 | 43200 | < th | dose independent | rect. | 23 | 1 |
| 598 | 23.80 | humidity | 80 | 43200 | < th | dose independent | rect. | 5 | 2 |
| 626 | 23.84 | radiation | 1 | 14400 | < th | dose independent | rect. | 5 | 2 |
| 635 | 23.85 | radiation | 1 | 14400 | > th | dose independent | rect. | 5 | 2 |
| 701 | 23.94 | radiation | 1 | 14400 | < th | dose independent | rect. | 23 | 8 |
| 707 | 23.94 | humidity | 80 | 43200 | < th | dose dependent | rect. | 22 | 1 |
| 710 | 23.95 | humidity | 80 | 43200 | < th | dose independent | rect. | 3 | 1 |
| 747 | 23.97 | humidity | 90 | 14400 | < th | dose independent | rect. | 24 | 11 |
| 756 | 23.98 | radiation | 1 | 14400 | > th | dose independent | rect. | 18 | 1 |
| 769 | 23.98 | wind | 3 | 43200 | > th | dose independent | rect. | 4 | 12 |
| 775 | 23.99 | humidity | 80 | 43200 | > th | dose independent | rect. | 24 | 1 |
| 784 | 23.99 | humidity | 90 | 14400 | < th | dose independent | rect. | 5 | 23 |
| 798 | 24.01 | wind | 3 | 43200 | < th | dose independent | rect. | 5 | 10 |
| 811 | 24.02 | wind | 3 | 43200 | > th | dose independent | rect. | 5 | 10 |
| 813 | 24.02 | wind | 3 | 43200 | < th | dose independent | rect. | 3 | 13 |
| 829 | 24.04 | humidity | 90 | 14400 | < th | dose independent | no | NA | NA |
| 847 | 24.05 | humidity | 90 | 14400 | < th | dose independent | rect. | 24 | 23 |
| 944 | 24.13 | wind | 5 | 43200 | < th | dose dependent | rect. | 5 | 11 |
| 956 | 24.15 | wind | 3 | 43200 | > th | dose independent | sin | 2 | NA |
| 986 | 24.17 | wind | 1 | 43200 | > th | dose dependent | rect. | 5 | 11 |
| 987 | 24.17 | wind | 1 | 43200 | > th | dose dependent | rect. | 4 | 13 |