Os02g0137000
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : WD40-like domain containing protein.
FiT-DB / Search/ Help/ Sample detail
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Os02g0137000 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : WD40-like domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = precipitation,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 20.56 | 0.213 | 10.5 | -0.24 | 0.368 | 0.235 | -0.408 | 0.946 | 0.367 | 0.957 | -0.006763 | 4701 | -- | -- |
| 20.61 | 0.211 | 10.5 | -0.211 | 0.378 | 0.394 | -0.385 | -- | 0.388 | 0.961 | 0.2634 | 6463 | -- | -- |
| 21.25 | 0.215 | 10.5 | -0.224 | 0.371 | 0.227 | -- | 0.941 | 0.367 | 1.07 | -0.002103 | 4685 | -- | -- |
| 21.25 | 0.215 | 10.5 | -0.2 | 0.375 | 0.393 | -- | -- | 0.39 | 1.1 | 0.2559 | 6463 | -- | -- |
| 29.75 | 0.254 | 10.5 | -0.215 | -- | 0.216 | -- | 1.01 | 0.368 | -- | -0.0171 | 4693 | -- | -- |
| 24.27 | 0.231 | 10.5 | -0.117 | 0.377 | -- | -0.347 | -- | 0.336 | 0.964 | -- | -- | -- | -- |
| 24.77 | 0.233 | 10.5 | -0.105 | 0.378 | -- | -- | -- | 0.337 | 1.07 | -- | -- | -- | -- |
| 30 | 0.255 | 10.5 | -0.187 | -- | 0.396 | -- | -- | 0.396 | -- | 0.3187 | 6488 | -- | -- |
| 22.19 | 0.219 | 10.5 | -- | 0.38 | 0.335 | -- | -- | 0.398 | 1.05 | 0.2369 | 6660 | -- | -- |
| 33.64 | 0.271 | 10.5 | -0.0903 | -- | -- | -- | -- | 0.345 | -- | -- | -- | -- | -- |
| 25.06 | 0.234 | 10.5 | -- | 0.376 | -- | -- | -- | 0.349 | 1.06 | -- | -- | -- | -- |
| 30.86 | 0.259 | 10.5 | -- | -- | 0.342 | -- | -- | 0.409 | -- | 0.2154 | 6510 | -- | -- |
| 33.86 | 0.272 | 10.5 | -- | -- | -- | -- | -- | 0.355 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 19.94 | wind | 3.0 | 14400 | < th | dose independent | rect. | 21 | 2 |
| 2 | 19.99 | wind | 3.0 | 14400 | > th | dose independent | rect. | 21 | 2 |
| 4 | 20.14 | temperature | 25.0 | 1440 | < th | dose independent | rect. | 19 | 6 |
| 7 | 20.20 | temperature | 25.0 | 1440 | > th | dose independent | rect. | 19 | 6 |
| 15 | 20.30 | temperature | 25.0 | 1440 | > th | dose independent | rect. | 20 | 4 |
| 22 | 20.37 | wind | 3.0 | 14400 | < th | dose independent | rect. | 21 | 4 |
| 27 | 20.42 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 12 | 11 |
| 28 | 20.42 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 12 | 11 |
| 31 | 20.42 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 12 | 11 |
| 34 | 20.43 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 12 | 9 |
| 35 | 20.43 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 12 | 9 |
| 45 | 20.43 | wind | 5.0 | 14400 | < th | dose dependent | rect. | 21 | 1 |
| 46 | 20.43 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 12 | 9 |
| 61 | 20.44 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 9 | 15 |
| 66 | 20.44 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 9 | 15 |
| 68 | 20.45 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 9 | 14 |
| 72 | 20.46 | precipitation | 0.1 | 14400 | > th | dose independent | sin | 20 | NA |
| 74 | 20.46 | precipitation | 0.1 | 14400 | < th | dose independent | sin | 20 | NA |
| 76 | 20.46 | humidity | 80.0 | 43200 | < th | dose independent | rect. | 4 | 4 |
| 80 | 20.46 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 9 | 12 |
| 88 | 20.46 | precipitation | 0.1 | 14400 | < th | dose dependent | sin | 20 | NA |
| 96 | 20.46 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 4 | 16 |
| 98 | 20.47 | wind | 3.0 | 14400 | > th | dose independent | rect. | 20 | 5 |
| 105 | 20.47 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 7 | 16 |
| 106 | 20.47 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 7 | 16 |
| 110 | 20.47 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 7 | 16 |
| 152 | 20.50 | precipitation | 0.1 | 14400 | > th | dose dependent | sin | 0 | NA |
| 168 | 20.51 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 9 | 11 |
| 185 | 20.52 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 12 | 8 |
| 199 | 20.53 | humidity | 80.0 | 43200 | < th | dose dependent | rect. | 1 | 7 |
| 208 | 20.54 | temperature | 30.0 | 270 | < th | dose independent | rect. | 3 | 15 |
| 265 | 20.56 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 4 | 20 |
| 284 | 20.57 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 13 | 4 |
| 294 | 20.58 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 16 | 5 |
| 295 | 20.58 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 16 | 5 |
| 307 | 20.58 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 16 | 5 |
| 310 | 20.58 | humidity | 80.0 | 43200 | > th | dose dependent | rect. | 17 | 8 |
| 312 | 20.58 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 12 | 12 |
| 314 | 20.58 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 9 | 15 |
| 318 | 20.58 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 7 | 17 |
| 357 | 20.60 | humidity | 80.0 | 43200 | > th | dose independent | rect. | 5 | 2 |
| 489 | 20.66 | humidity | 80.0 | 43200 | > th | dose independent | rect. | 2 | 6 |
| 508 | 20.66 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 13 | 19 |
| 511 | 20.66 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 22 | 22 |
| 521 | 20.67 | wind | 1.0 | 14400 | > th | dose dependent | rect. | 21 | 1 |
| 527 | 20.67 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 13 | 17 |
| 612 | 20.70 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 7 | 23 |
| 622 | 20.71 | precipitation | 0.1 | 14400 | > th | dose dependent | no | NA | NA |
| 637 | 20.71 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 16 | 22 |
| 650 | 20.72 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 21 | 23 |
| 651 | 20.72 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 21 | 23 |
| 653 | 20.72 | humidity | 80.0 | 43200 | > th | dose dependent | rect. | 19 | 5 |
| 662 | 20.72 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 21 | 23 |
| 679 | 20.73 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 19 | 23 |
| 753 | 20.76 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 12 | 19 |
| 755 | 20.76 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 12 | 20 |
| 760 | 20.76 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 12 | 22 |
| 776 | 20.76 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 12 | 19 |
| 784 | 20.76 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 12 | 22 |
| 799 | 20.77 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 12 | 18 |
| 950 | 20.80 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 9 | 22 |
| 955 | 20.80 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 9 | 22 |
| 968 | 20.80 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 16 | 14 |
| 982 | 20.80 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 9 | 22 |
| 986 | 20.81 | precipitation | 0.1 | 4320 | > th | dose independent | no | NA | NA |
| 987 | 20.81 | precipitation | 0.1 | 4320 | < th | dose independent | no | NA | NA |